IVF0014038 (gene) Melon (IVF77) v1

Overview


Name	IVF0014038
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein LATE FLOWERING-like
Location	chr04: 11215098 .. 11215634 (+)
RNA-Seq Expression	IVF0014038
Synteny	IVF0014038

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATATGAAGAAAGCCTTTCAAAAGTAGTTGAAATTGAAACCAACAACAACGATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCCTTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATTACTCAGTGTCGCCACCATCGCCGTTCTCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGCTGGGTTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTGAATTGGGAGAGAAACATAAAGAACGATCTTAGTAGGATAAACCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG

mRNA sequence

ATGGAATATGAAGAAAGCCTTTCAAAAGTAGTTGAAATTGAAACCAACAACAACGATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCCTTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATTACTCAGTGTCGCCACCATCGCCGTTCTCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGCTGGGTTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTGAATTGGGAGAGAAACATAAAGAACGATCTTAGTAGGATAAACCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG

Coding sequence (CDS)

ATGGAATATGAAGAAAGCCTTTCAAAAGTAGTTGAAATTGAAACCAACAACAACGATATTGTTGAAAAAGTACTTGAAATGGAAGAAACCCCATCAAGAGTTTTCCCTTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCGAGGAAAGCCAAGCGAATCTGCGATTACTCAGTGTCGCCACCATCGCCGTTCTCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGCTGGGTTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTTCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTGAATTGGGAGAGAAACATAAAGAACGATCTTAGTAGGATAAACCATGATAAGGAAAAAGAGCAAAAACTTGATCTTTCTCTCCATTTATAG

Protein sequence

MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL

Homology

[Close]

BLAST of IVF0014038 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18
Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 28  EETPS-RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 87
           E T S R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +     + P  
Sbjct: 27  ENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDFLHTLP-- 86

Query: 88  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVF-------------CG 147
            VF +S  QHH   +L +P       A++ CFP       ++ +F              G
Sbjct: 87  -VFLSSPSQHH-LTILGYPA-----SASVACFPTVHP---DHPIFKSSGSHVVLATSHQG 146

Query: 148 GVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 179
             C      Q   ++L+   N+      +N DK K+Q LDLSLHL
Sbjct: 147 RDCKGGYCCQQRVDILDHHYNV------VNSDKGKDQCLDLSLHL 173

[Close]

BLAST of IVF0014038 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 26  EMEETPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI 71
           + ++ PS   RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Sbjct: 73  QQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120

[Close]

BLAST of IVF0014038 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-08
Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 30  TPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVF 89
           T  ++F C +C R F SSQALGGHQNAHK+ERT A++ +R+   + +   P+   + L F
Sbjct: 56  TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF-SPLPF 115

Query: 90  AASQQQHHPAGLLPHPV 107
                 H   G+  H +
Sbjct: 116 HGQYNNHRSLGIQAHSI 131

[Close]

BLAST of IVF0014038 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.1e-08
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 33 RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK 67
          R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

[Close]

BLAST of IVF0014038 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.7e-08
Identity = 36/81 (44.44%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 6   SLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAAR 65
           S+S      TN++  +E+         RVF C +C RKF SSQALGGHQNAHK ERT A+
Sbjct: 31  SMSSSSSSSTNSSSCLEQ--------PRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAK 90

Query: 66  KAKRICDYS----VSPPSPFS 83
           K++ +   S       P PFS
Sbjct: 91  KSRELFRSSNTVDSDQPYPFS 103

[Close]

BLAST of IVF0014038 vs. ExPASy TrEMBL
Match: A0A1S3BIU8 (protein LATE FLOWERING-like OS=Cucumis melo OX=3656 GN=LOC103490048 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.1e-97
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60
           MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE
Sbjct: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60

Query: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120
           RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN
Sbjct: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120

Query: 121 NQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 179
           NQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 178

[Close]

BLAST of IVF0014038 vs. ExPASy TrEMBL
Match: A0A5A7VIQ7 (Protein LATE FLOWERING-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002620 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.8e-83
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 27  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 86
           MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS
Sbjct: 1   MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 60

Query: 87  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 146
           LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE
Sbjct: 61  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 120

Query: 147 NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 179
           NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 152

[Close]

BLAST of IVF0014038 vs. ExPASy TrEMBL
Match: A0A0A0LE19 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G624040 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.5e-79
Identity = 147/152 (96.71%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 27  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 86
           MEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTS
Sbjct: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60

Query: 87  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 146
           LVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVC SNRYHQDEE
Sbjct: 61  LVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEE 120

Query: 147 NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 179
           NLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NLLNWERNIKKDLSRINHDKEKEQKLDLSLHL 151

[Close]

BLAST of IVF0014038 vs. ExPASy TrEMBL
Match: A0A6J1HVN7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111467088 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.6e-51
Identity = 111/160 (69.38%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 27  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVS-PPSPFSAPT 86
           MEE PSR+FPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI DY+ S  PSP S+ +
Sbjct: 14  MEEIPSRIFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRISDYAASESPSPSSSSS 73

Query: 87  SLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYH--- 146
           S VFAA+  Q H  GL PHP+YIA + ANLHCFPNN  L YE+M + GGVCSSNRYH   
Sbjct: 74  SSVFAATHHQTHHPGLYPHPMYIA-NAANLHCFPNNPPLFYEHMGYYGGVCSSNRYHHHH 133

Query: 147 ----QDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 179
               +DE+N+LNW+RNIKN       DK+KEQKLDLSLHL
Sbjct: 134 QYGVEDEQNVLNWQRNIKN-------DKKKEQKLDLSLHL 165

[Close]

BLAST of IVF0014038 vs. ExPASy TrEMBL
Match: A0A6J1ETH7 (protein LATE FLOWERING OS=Cucurbita moschata OX=3662 GN=LOC111437406 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.6e-51
Identity = 117/189 (61.90%), Postives = 135/189 (71.43%), Query Frame = 0


Query: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60
           ME EE   +V E  +         +EMEETPSR+FPCLFCSRKFQ+SQALGGHQNAHKKE
Sbjct: 1   MEDEEQPLQVAESSS---------VEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKE 60

Query: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120
           RTA RKAKR+ DYS S  S  S+    VFA +QQ HHPA +LPHPVYIA HGANLHCFPN
Sbjct: 61  RTAVRKAKRLSDYSSSSSSSLSSRPLSVFAGNQQLHHPA-ILPHPVYIAAHGANLHCFPN 120

Query: 121 NQQLLY---------ENMVFCGGVCSSNRYH--QDEENLLNWERNIKNDLSRINHDKEKE 179
           NQQ+ Y         E+MV+ GGVCS NRY   +DE+++LNW+R+IK        DKEKE
Sbjct: 121 NQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEDHVLNWQRSIKK-------DKEKE 172

[Close]

BLAST of IVF0014038 vs. NCBI nr
Match: XP_008447640.1 (PREDICTED: protein LATE FLOWERING-like [Cucumis melo])

HSP 1 Score: 362 bits (929), Expect = 3.01e-126
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60
           MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE
Sbjct: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60

Query: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120
           RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN
Sbjct: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120

Query: 121 NQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 178
           NQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 178

[Close]

BLAST of IVF0014038 vs. NCBI nr
Match: XP_031739318.1 (protein LATE FLOWERING [Cucumis sativus])

HSP 1 Score: 343 bits (879), Expect = 1.23e-118
Identity = 170/178 (95.51%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60
           MEYEESLSKVVEIETN+N+IVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKE
Sbjct: 1   MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60

Query: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120
           RTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFPN
Sbjct: 61  RTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPN 120

Query: 121 NQQLLYENMVFCGGVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 178
           NQQLLYENMVFCGGVC SNRYHQDEENLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL 177

[Close]

BLAST of IVF0014038 vs. NCBI nr
Match: KAA0066236.1 (protein LATE FLOWERING-like [Cucumis melo var. makuwa])

HSP 1 Score: 316 bits (809), Expect = 2.42e-108
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 27  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 86
           MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS
Sbjct: 1   MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 60

Query: 87  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 146
           LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE
Sbjct: 61  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 120

Query: 147 NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 178
           NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL
Sbjct: 121 NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 152

[Close]

BLAST of IVF0014038 vs. NCBI nr
Match: XP_038888938.1 (protein LATE FLOWERING [Benincasa hispida])

HSP 1 Score: 290 bits (742), Expect = 9.06e-98
Identity = 152/184 (82.61%), Postives = 159/184 (86.41%), Query Frame = 0


Query: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60
           MEYEE LS+V E  TNNN     ++EMEETP+RVFPCLFCSRKFQSSQALGGHQNAHKKE
Sbjct: 1   MEYEEKLSQVAE--TNNN-----IVEMEETPTRVFPCLFCSRKFQSSQALGGHQNAHKKE 60

Query: 61  RTAARKAKRICDYSV---SPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHC 120
           RTAARKAKRI DYS    SPPSPF AP SLVF AS QQHHP GLLP PVYIATHG NLHC
Sbjct: 61  RTAARKAKRISDYSTNFSSPPSPFPAPPSLVFPASHQQHHP-GLLPQPVYIATHGTNLHC 120

Query: 121 FPNNQQLLYENMVFCGGVCSSNRYHQ---DEENLLNWERNIKNDLSRINHDKEKEQKLDL 178
           FPNNQQLLYENMV+CGGVC+SNRYHQ   DEENLLNWER+IK DLSRINHDKEKEQKLDL
Sbjct: 121 FPNNQQLLYENMVYCGGVCTSNRYHQCGADEENLLNWERSIKKDLSRINHDKEKEQKLDL 176

[Close]

BLAST of IVF0014038 vs. NCBI nr
Match: KAE8650843.1 (hypothetical protein Csa_017433, partial [Cucumis sativus])

HSP 1 Score: 236 bits (603), Expect = 2.28e-77
Identity = 118/124 (95.16%), Postives = 121/124 (97.58%), Query Frame = 0


Query: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60
           MEYEESLSKVVEIETN+N+IVEKV+EMEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKE
Sbjct: 1   MEYEESLSKVVEIETNDNNIVEKVVEMEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60

Query: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120
           RTAARKAKRICDYSVSPPSPF APTSLVFAASQQQHHP GLLPHPVYIATHGANLHCFPN
Sbjct: 61  RTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHP-GLLPHPVYIATHGANLHCFPN 120

Query: 121 NQQL 124
           NQQL
Sbjct: 121 NQQL 123

[Close]

BLAST of IVF0014038 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 69/165 (41.82%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 28  EETPS-RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 87
           E T S R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +     + P  
Sbjct: 27  ENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDFLHTLP-- 86

Query: 88  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVF-------------CG 147
            VF +S  QHH   +L +P       A++ CFP       ++ +F              G
Sbjct: 87  -VFLSSPSQHH-LTILGYPA-----SASVACFPTVHP---DHPIFKSSGSHVVLATSHQG 146

Query: 148 GVCSSNRYHQDEENLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 179
             C      Q   ++L+   N+      +N DK K+Q LDLSLHL
Sbjct: 147 RDCKGGYCCQQRVDILDHHYNV------VNSDKGKDQCLDLSLHL 173

[Close]

BLAST of IVF0014038 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 61.2 bits (147), Expect = 9.5e-10
Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 26  EMEETPS---RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI 71
           + ++ PS   RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Sbjct: 73  QQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120

[Close]

BLAST of IVF0014038 vs. TAIR 10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 29  ETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-------CDYSVSPPSPF 87
           E  +RVF C FC ++F +SQALGGHQNAHK+ER+ A++ K I         YS  PPS  
Sbjct: 61  EAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEINYPELSIYSQYPPSGL 120

[Close]

BLAST of IVF0014038 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 30  TPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTSLVF 89
           T  ++F C +C R F SSQALGGHQNAHK+ERT A++ +R+   + +   P+   + L F
Sbjct: 56  TEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGF-SPLPF 115

Query: 90  AASQQQHHPAGLLPHPV 107
                 H   G+  H +
Sbjct: 116 HGQYNNHRSLGIQAHSI 131

[Close]

BLAST of IVF0014038 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-09
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 33 RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK 67
          R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

The following BLAST results are available for this feature:

BLAST of IVF0014038 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKA9	2.4e-18	41.82	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39263	1.3e-08	60.42	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39262	3.0e-08	38.96	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q9FFX4	5.1e-08	73.53	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]
Q39261	8.7e-08	44.44	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of IVF0014038 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BIU8	6.1e-97	100.00	protein LATE FLOWERING-like OS=Cucumis melo OX=3656 GN=LOC103490048 PE=4 SV=1	[more]
A0A5A7VIQ7	3.8e-83	100.00	Protein LATE FLOWERING-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A0A0LE19	7.5e-79	96.71	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G624040 P...	[more]
A0A6J1HVN7	6.6e-51	69.38	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111467088 PE=4 SV=...	[more]
A0A6J1ETH7	6.6e-51	61.90	protein LATE FLOWERING OS=Cucurbita moschata OX=3662 GN=LOC111437406 PE=4 SV=1	[more]

BLAST of IVF0014038 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447640.1	3.01e-126	100.00	PREDICTED: protein LATE FLOWERING-like [Cucumis melo]	[more]
XP_031739318.1	1.23e-118	95.51	protein LATE FLOWERING [Cucumis sativus]	[more]
KAA0066236.1	2.42e-108	100.00	protein LATE FLOWERING-like [Cucumis melo var. makuwa]	[more]
XP_038888938.1	9.06e-98	82.61	protein LATE FLOWERING [Benincasa hispida]	[more]
KAE8650843.1	2.28e-77	95.16	hypothetical protein Csa_017433, partial [Cucumis sativus]	[more]

BLAST of IVF0014038 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48890.1	1.7e-19	41.82	C2H2-like zinc finger protein	[more]
AT1G66140.1	9.5e-10	60.42	zinc finger protein 4	[more]
AT5G01860.1	1.6e-09	49.23	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	2.1e-09	38.96	zinc finger protein 3	[more]
AT5G14010.1	3.6e-09	73.53	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 14..76 e-value: 8.0E-7 score: 30.8
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 28..178
None	No IPR available	PANTHER	PTHR45730:SF80	PROTEIN LATE FLOWERING	coord: 28..178
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 37..57
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 35..62 score: 10.969637
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 31..62

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0014038.1	IVF0014038.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane