IVF0013964 (gene) Melon (IVF77) v1

Overview


Name	IVF0013964
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Envelope-like protein
Location	chr11: 10579484 .. 10579870 (-)
RNA-Seq Expression	IVF0013964
Synteny	IVF0013964

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAACACCCGGAAAGGTAATTATTAGGCTAAATTGTCTAAAGTAGTTCATGAAGCTCTAGCTTCAAAGTCTACCATGCATGGTGTACGAATGTGAGGTCGTCGTTTCAAAAGCACTCCGCTACGAAGACCGTATTGACTTCCGTCAGAAAAATCTCAGGTACATGCCTCCGAAAGTTATCATCTGCCTAAGCATGAAAAGGTTGCTGATGGAAGTGCTGCAAAAGGTGTTGGAAATGCACCAAGTGTCTCTGAGACTCACATTTCAGACATGGATTCGGATGAGAAAGATGATGTTCCGCTGGCTAGACTATTGAAGAAAGGTTTTGCTTTCAATGTCGCTTCTGCAAAATCTACCGATCTTGTCATATCAGCTCGTTCTTAA

mRNA sequence

ATGGTGAACACCCGGAAAGAAAAATCTCAGGTACATGCCTCCGAAAGTTATCATCTGCCTAAGCATGAAAAGGTTGCTGATGGAAGTGCTGCAAAAGGTGTTGGAAATGCACCAAGTGTCTCTGAGACTCACATTTCAGACATGGATTCGGATGAGAAAGATGATGTTCCGCTGGCTAGACTATTGAAGAAAGGTTTTGCTTTCAATGTCGCTTCTGCAAAATCTACCGATCTTGTCATATCAGCTCGTTCTTAA

Coding sequence (CDS)

ATGGTGAACACCCGGAAAGAAAAATCTCAGGTACATGCCTCCGAAAGTTATCATCTGCCTAAGCATGAAAAGGTTGCTGATGGAAGTGCTGCAAAAGGTGTTGGAAATGCACCAAGTGTCTCTGAGACTCACATTTCAGACATGGATTCGGATGAGAAAGATGATGTTCCGCTGGCTAGACTATTGAAGAAAGGTTTTGCTTTCAATGTCGCTTCTGCAAAATCTACCGATCTTGTCATATCAGCTCGTTCTTAA

Protein sequence

MVNTRKEKSQVHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNVASAKSTDLVISARS

Homology

[Close]

BLAST of IVF0013964 vs. ExPASy TrEMBL
Match: A0A5D3CE78 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold458G00080 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 11 VHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNV 70
          VHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNV
Sbjct: 4  VHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNV 63

Query: 71 ASAKSTDLVISARS 85
          ASAKSTDLVISARS
Sbjct: 64 ASAKSTDLVISARS 77

[Close]

BLAST of IVF0013964 vs. ExPASy TrEMBL
Match: A0A5A7V2P0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1836G00020 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 5   RKEKSQVHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKK 64
           RKEKSQVHA ESYH+PKHE++  GSAAKGV NAPSVS+THISDMDSD++D+VPL RLLKK
Sbjct: 21  RKEKSQVHAFESYHVPKHEEITTGSAAKGVENAPSVSKTHISDMDSDKQDNVPLVRLLKK 80

Query: 65  GFAFNVASAKSTDLVISARS 85
           GFA NVA AKS D  ISARS
Sbjct: 81  GFASNVAPAKSADPTISARS 100

[Close]

BLAST of IVF0013964 vs. ExPASy TrEMBL
Match: A0A5D3DLB4 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001690 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-18
Identity = 54/77 (70.13%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 8   KSQVHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFA 67
           KS +H    YH+ +H+ VA GSAAKGV NAPSVSETHISDMD DE+DDV LARLLKKG A
Sbjct: 52  KSTMHGVRIYHVTEHDDVATGSAAKGVENAPSVSETHISDMDLDEQDDVLLARLLKKGVA 111

Query: 68  FNVASAKSTDLVISARS 85
            NV   KS DLVISA S
Sbjct: 112 SNVVPTKSVDLVISAHS 128

[Close]

BLAST of IVF0013964 vs. ExPASy TrEMBL
Match: A0A5A7TIP8 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G001030 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-18
Identity = 54/77 (70.13%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 8   KSQVHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFA 67
           KS +H    YH+ +H+ VA GSAAKGV NAPSVSETHISDMD DE+DDV LARLLKKG A
Sbjct: 52  KSTMHGVRIYHVTEHDDVATGSAAKGVENAPSVSETHISDMDLDEQDDVLLARLLKKGVA 111

Query: 68  FNVASAKSTDLVISARS 85
            NV   KS DLVISA S
Sbjct: 112 SNVVPTKSVDLVISAHS 128

[Close]

BLAST of IVF0013964 vs. ExPASy TrEMBL
Match: A0A5A7SU78 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00070 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.9e-18
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 34 VGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNVASAKSTDLVISARS 85
          VGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNVASAKSTDLVISARS
Sbjct: 33 VGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNVASAKSTDLVISARS 83

[Close]

BLAST of IVF0013964 vs. NCBI nr
Match: TYK09582.1 (uncharacterized protein E5676_scaffold458G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 145 bits (365), Expect = 2.43e-43
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 11 VHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNV 70
          VHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNV
Sbjct: 4  VHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNV 63

Query: 71 ASAKSTDLVISARS 84
          ASAKSTDLVISARS
Sbjct: 64 ASAKSTDLVISARS 77

[Close]

BLAST of IVF0013964 vs. NCBI nr
Match: KAA0060145.1 (uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK19510.1 uncharacterized protein E5676_scaffold1836G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 123 bits (308), Expect = 1.82e-32
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 0


Query: 5   RKEKSQVHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKK 64
           RKEKSQVHA ESYH+PKHE++  GSAAKGV NAPSVS+THISDMDSD++D+VPL RLLKK
Sbjct: 21  RKEKSQVHAFESYHVPKHEEITTGSAAKGVENAPSVSKTHISDMDSDKQDNVPLVRLLKK 80

Query: 65  GFAFNVASAKSTDLVISARS 84
           GFA NVA AKS D  ISARS
Sbjct: 81  GFASNVAPAKSADPTISARS 100

[Close]

BLAST of IVF0013964 vs. NCBI nr
Match: KAA0034784.1 (uncharacterized protein E6C27_scaffold213G00070 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (248), Expect = 2.01e-25
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 34 VGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNVASAKSTDLVISARS 84
          VGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNVASAKSTDLVISARS
Sbjct: 33 VGNAPSVSETHISDMDSDEKDDVPLARLLKKGFAFNVASAKSTDLVISARS 83

[Close]

BLAST of IVF0013964 vs. NCBI nr
Match: TYK24384.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 101 bits (251), Expect = 4.26e-23
Identity = 54/77 (70.13%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 8   KSQVHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFA 67
           KS +H    YH+ +H+ VA GSAAKGV NAPSVSETHISDMD DE+DDV LARLLKKG A
Sbjct: 52  KSTMHGVRIYHVTEHDDVATGSAAKGVENAPSVSETHISDMDLDEQDDVLLARLLKKGVA 111

Query: 68  FNVASAKSTDLVISARS 84
            NV   KS DLVISA S
Sbjct: 112 SNVVPTKSVDLVISAHS 128

[Close]

BLAST of IVF0013964 vs. NCBI nr
Match: KAA0041511.1 (envelope-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 101 bits (251), Expect = 4.62e-23
Identity = 54/77 (70.13%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 8   KSQVHASESYHLPKHEKVADGSAAKGVGNAPSVSETHISDMDSDEKDDVPLARLLKKGFA 67
           KS +H    YH+ +H+ VA GSAAKGV NAPSVSETHISDMD DE+DDV LARLLKKG A
Sbjct: 52  KSTMHGVRIYHVTEHDDVATGSAAKGVENAPSVSETHISDMDLDEQDDVLLARLLKKGVA 111

Query: 68  FNVASAKSTDLVISARS 84
            NV   KS DLVISA S
Sbjct: 112 SNVVPTKSVDLVISAHS 128

The following BLAST results are available for this feature:

BLAST of IVF0013964 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0013964 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CE78	2.7e-31	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V2P0	1.1e-24	78.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DLB4	4.5e-18	70.13	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold20...	[more]
A0A5A7TIP8	4.5e-18	70.13	Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G...	[more]
A0A5A7SU78	5.9e-18	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of IVF0013964 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK09582.1	2.43e-43	100.00	uncharacterized protein E5676_scaffold458G00080 [Cucumis melo var. makuwa]	[more]
KAA0060145.1	1.82e-32	78.75	uncharacterized protein E6C27_scaffold542G00020 [Cucumis melo var. makuwa] >TYK1...	[more]
KAA0034784.1	2.01e-25	100.00	uncharacterized protein E6C27_scaffold213G00070 [Cucumis melo var. makuwa]	[more]
TYK24384.1	4.26e-23	70.13	envelope-like protein [Cucumis melo var. makuwa]	[more]
KAA0041511.1	4.62e-23	70.13	envelope-like protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0013964 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013964.1	IVF0013964.1	mRNA