IVF0013885 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTGGCATTGTCAATCAACACCTTTGCTTTCATGTCTCACTTATAAAACTCCGATTCCACATATTCTTTTCTTTTCAATCCCCACAAGATAACTCATTAAATTATCAAGTCCCCAAAACATAAAACACAAATCGCAATTTTACAAAGCCGCGCAGAGCAACAATAACCAAAAGCAATGTGTTACCCACACCATTTCCTGCCTCGCACGGACTTTTTGTCTCCCCAATGCAATTGGGTTCTCTTTCAGACCGTACCGGCGGAGGAGACGACAGCGGCGATTGAGAGTTGCGGCGATGAGTCGGGGAAAAGGCGGTGTTTGTGCTCGCCGACGACGCACCCAGGGTCTTTTCGTTGCAGGTTACACCGAAGTGAGTACGTTTGGGTTGCGCGGCGGAGGACGGTAAAAAATGTATCGGCGGAGGTTAAAGTACTGACGAACGATAAGTAATTACTTTTGGTGGTCTCTGTAAAAGTAATATGAATGAGTTTGTGTGTATTATATATAACCATAATTGGGATTGCATGCAATTGCATATGGATGAATATTAGTTGTGGCTTTTAACTTGGTTAAGGTTTTTGGAACTAAATTTTTATGATAGAAGTCCAATGTCCCCTTGGATATTTTGAGAGGTTGAATTTTAGTTAAAGAAGTGGAATGTCCATTTTCGAGTCTATGTTATTACTGTGCTATGCATGTGAAGTTTTATGTATTATGAAAATAAAAATATAAAACCAACGAAGATCCGTTACCGTATGTATGCTCTAAAATAATCATGGAAATTTTAAAAGTTCTTTTTTTTTTTTTTTAAACATTTTTCTATTAACTTTTTCCTGTCTCGTTGCTCTGGCTCGTATTCCTCATTTGTTTTTCTTGCTCTAGCTCTTTAGTCTCGCTTGGTTTTGTACACCTTCAATATTTGAATGTTAAAAGTTTTATGGTAAGAGAGAAAAAAGACGAGAATGACAACTAGAGATCTAAAATTAATGAAATTTTTCCAAAAGAAGAGAGGAATCAACAAATCAAAAATTATATAACCCTACTTTCTAATATCGACCTAGTATTTTGAACCAACAATACAATTATCTAAAAAAACATACTTGATCTCATAAAGAGAGCATGAGAAACGTCCATGAGGACAGCCATTTGAGTTCCATGAAACCTTTGTAGGAC GTTTGGCATTGTCAATCAACACCTTTGCTTTCATGTCTCACTTATAAAACTCCGATTCCACATATTCTTTTCTTTTCAATCCCCACAAGATAACTCATTAAATTATCAAGTCCCCAAAACATAAAACACAAATCGCAATTTTACAAAGCCGCGCAGAGCAACAATAACCAAAAGCAATGTGTTACCCACACCATTTCCTGCCTCGCACGGACTTTTTGTCTCCCCAATGCAATTGGGTTCTCTTTCAGACCGTACCGGCGGAGGAGACGACAGCGGCGATTGAGAGTTGCGGCGATGAGTCGGGGAAAAGGCGGTGTTTGTGCTCGCCGACGACGCACCCAGGGTCTTTTCGTTGCAGGTTACACCGAAGTGAGTACGTTTGGGTTGCGCGGCGGAGGACGGTAAAAAATGTATCGGCGGAGGTTAAAGTACTGACGAACGATAAGTAATTACTTTTGGTGGTCTCTGTAAAAGTAATATGAATGAGTTTGTGTGTATTATATATAACCATAATTGGGATTGCATGCAATTGCATATGGATGAATATTAGTTGTGGCTTTTAACTTGGTTAAGGTTTTTGGAACTAAATTTTTATGATAGAAGTCCAATGTCCCCTTGGATATTTTGAGAGGTTGAATTTTAGTTAAAGAAGTGGAATGTCCATTTTCGAGTCTATGTTATTACTGTGCTATGCATGTGAAGTTTTATGTATTATGAAAATAAAAATATAAAACCAACGAAGATCCGTTACCGTATGTATGCTCTAAAATAATCATGGAAATTTTAAAAGTTCTTTTTTTTTTTTTTTAAACATTTTTCTATTAACTTTTTCCTGTCTCGTTGCTCTGGCTCGTATTCCTCATTTGTTTTTCTTGCTCTAGCTCTTTAGTCTCGCTTGGTTTTGTACACCTTCAATATTTGAATGTTAAAAGTTTTATGGTAAGAGAGAAAAAAGACGAGAATGACAACTAGAGATCTAAAATTAATGAAATTTTTCCAAAAGAAGAGAGGAATCAACAAATCAAAAATTATATAACCCTACTTTCTAATATCGACCTAGTATTTTGAACCAACAATACAATTATCTAAAAAAACATACTTGATCTCATAAAGAGAGCATGAGAAACGTCCATGAGGACAGCCATTTGAGTTCCATGAAACCTTTGTAGGAC ATGTGTTACCCACACCATTTCCTGCCTCGCACGGACTTTTTGTCTCCCCAATGCAATTGGGTTCTCTTTCAGACCGTACCGGCGGAGGAGACGACAGCGGCGATTGAGAGTTGCGGCGATGAGTCGGGGAAAAGGCGGTGTTTGTGCTCGCCGACGACGCACCCAGGGTCTTTTCGTTGCAGGTTACACCGAAGTGAGTACGTTTGGGTTGCGCGGCGGAGGACGGTAAAAAATGTATCGGCGGAGGTTAAAGTACTGACGAACGATAAGTAA MCYPHHFLPRTDFLSPQCNWVLFQTVPAEETTAAIESCGDESGKRRCLCSPTTHPGSFRCRLHRSEYVWVARRRTVKNVSAEVKVLTNDK Homology
BLAST of IVF0013885 vs. ExPASy TrEMBL
Match: A0A5A7TXE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001380 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.9e-47 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of IVF0013885 vs. ExPASy TrEMBL
Match: A0A0A0LZG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G369510 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.9e-38 Identity = 76/90 (84.44%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of IVF0013885 vs. ExPASy TrEMBL
Match: A0A7J7DQF6 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW04G00558 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.5e-08 Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of IVF0013885 vs. ExPASy TrEMBL
Match: A0A4P1RQR0 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_04528 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.9e-07 Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of IVF0013885 vs. ExPASy TrEMBL
Match: V4TV07 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10010038mg PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07 Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 0
BLAST of IVF0013885 vs. NCBI nr
Match: KAA0046597.1 (hypothetical protein E6C27_scaffold114G001380 [Cucumis melo var. makuwa]) HSP 1 Score: 195 bits (496), Expect = 4.69e-63 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of IVF0013885 vs. NCBI nr
Match: KGN65356.1 (hypothetical protein Csa_020011 [Cucumis sativus]) HSP 1 Score: 166 bits (420), Expect = 1.86e-51 Identity = 76/90 (84.44%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of IVF0013885 vs. NCBI nr
Match: KAG6589902.1 (hypothetical protein SDJN03_15325, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 111 bits (278), Expect = 7.68e-30 Identity = 57/91 (62.64%), Postives = 62/91 (68.13%), Query Frame = 0
BLAST of IVF0013885 vs. NCBI nr
Match: KAF5748600.1 (hypothetical protein HS088_TW04G00558 [Tripterygium wilfordii]) HSP 1 Score: 67.0 bits (162), Expect = 2.67e-12 Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of IVF0013885 vs. NCBI nr
Match: KAG6669361.1 (hypothetical protein CIPAW_01G239000 [Carya illinoinensis] >KAG6733751.1 hypothetical protein I3842_01G240100 [Carya illinoinensis] >KAG7997856.1 hypothetical protein I3843_01G230700 [Carya illinoinensis]) HSP 1 Score: 65.5 bits (158), Expect = 1.35e-11 Identity = 37/82 (45.12%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of IVF0013885 vs. TAIR 10
Match: AT1G52342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 2.9e-07 Identity = 22/42 (52.38%), Postives = 29/42 (69.05%), Query Frame = 0
BLAST of IVF0013885 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 1.9e-06 Identity = 19/22 (86.36%), Postives = 20/22 (90.91%), Query Frame = 0
BLAST of IVF0013885 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). ) HSP 1 Score: 49.3 bits (116), Expect = 1.9e-06 Identity = 19/22 (86.36%), Postives = 20/22 (90.91%), Query Frame = 0
BLAST of IVF0013885 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related ) HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06 Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = 0
BLAST of IVF0013885 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related ) HSP 1 Score: 47.8 bits (112), Expect = 5.5e-06 Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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