IVF0013647 (gene) Melon (IVF77) v1

Overview


Name	IVF0013647
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein CHUP1, chloroplastic isoform X2
Location	chr12: 730697 .. 733855 (-)
RNA-Seq Expression	IVF0013647
Synteny	IVF0013647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCAAGCAAACCATAATAGTTTGGCTTCTCCTTTAGCCCATTTATTAAAAAATAAAGGAGAATGCCGAAGGAAAAGGATGAAGAATTGGCTATGGAGATCGATTGCTTGAAAAAAGATTTGGAAATTTCTCTACAAAAATCAATTTTCCTCGAAAGAGAAAATCAAGAACTCAGACTGGAATTGAATCGATTGAAATCCCAAATTCAGTCATTGAAAGCGCTCAACAATGAGAGAAAGTCCATTCTCTGGAAGAAATTTCATAGCTCCATGGATATGGCCGTCGCCGGAGCTGACTCCCCGCCGCTCAACCCTGCCACGGCGGCGGGTGATAAACGGGAGGTGACCAAATTCCCGAAACAGAGTAGTTGGGATGATGTGAAAGAGAGTCAGAGAATGACGGCGGTACCGGCATCGGCACCACCGCCGCCTCCGCCGCCACTTCCGAAGAAGCTGCTCGGAGGATCGAAGGCAGTGCGGCGTGTTCCGGAGGTGTTGGATTTGTATCGTACACTGACGAAAAGGGATGCACAGAAGGAAAATAAAGTGGCACACGGCGGAGCTCCGGTAGTGGCGTTCACTAAAAACATGATCGGCGAAATTGAAAACCGATCGGCCTATCTCTCGGCGGTATGTATTTATTATAATTAACGGATATTTATGGGGTGGTGACGTTCGAAAATTTTGAAAATAAATTGAATTTTATATTTGATAGAGTTCTAAACTTTTAATTTACTCGTTTATTTTTTATGAATAATAGAAATGAAATTTCATAATCATTCGAAGTCCAACTCAAATTTAAATATTTTACAAGTTTATGTGTGTGTCAGTGCACTTCAAATTTAAGAGTTTTTTTTTTTTCTTTTTTCGGTTTCTTTTTTACCATATACTTGGGGATGATTATGATATCCAAATTGATATTACATGGCAATGGTTGAGCTATGATCATTGGAGTTAAAAGACTTAGAAAGTTTTTTATATGGTAACGCACTTTTTTATCTTAAATTACTTATTTGTTCGACTATACTATAAATAATTGAAAATTTGTTCAACAAATAAAATTGAATTGTAAATATTTATCCATGGAAACTAATTAAATTAAATTATTGTTCAACAAATAAAATTGAATTGTAAATATTTATCCATGGAAACTAATTAAATAAAAATCTTTGTTAGGTTGATGTTAATAGATTTAAAATTCTTGAGGCAAAAAACTATGGCTTTATTTGCATATACTTGAATCTATGAACATATTAATTTAAGTGAGTAAGAAAAAAAAAATCACACAAAAAGTCTATCAAGAAGTCATACAAGTTAATAAAAGTTAGTGATACATCCCTCTTTGGTTAGTGATTCCCCACCTATTCGAGTTTCACCGGTTAGTAACTCTAAAACATGATTGAAGTATTTTCATTTAAGTTTTAAAAGATAAAAAATCAAAAGGCTAGATTGTCTAAAATATTAAAAATGGAACACATGGCAGATAAAATCTGAGGTAGAAACACATGGAGAGTTTGTGAACTGGTTGATCAAAGAAGTAGAAATGATAGCACCAAGAGACATATCAGAGGCGGAAAAGTTCGTGAAGTGGCTTGACGTGAAATTGGCATCACTGGTGGACGAGAGAGCAGTGCTAAAGCACTTCCCACGGTGGCCAGAGGCAAAAGCAGATGCGCTACGAGAGGCAGCATTCAGCTACCGAGACCTCAAGAGCTTAGAGAGCAAAGTGTGTATGTTTAGAGACAATCCAAAGGAAGAGATGAATGTTGTGTTGAAGAGAGCTCAAGCATTGCAAGACAGGCGAGAATGTACAATCAATTCGTTATTTTTGTTGTGCAATGTTTATTGTTTTGGTAGGTAGTTGATTTTTGAATGATGAATTTATGAGAATTTTGTTGCTTTAAAACGTGCAGGGTGGAGCAGAGTGTGAGTAATATGGAGAGGACGAGGGAGTTCAATTGTAAGAAGTATCAAGCTTTTCAAATCCCCTGCCAATGGATGTTCGATTCCGCTTTGCCTACTCAGGTATCCAACATTAACACATTAAATAGCACTAATTATCACTTCAAGGTTCAAAATTGACTTTCTAACATCTTTTTAAGTGTCCTTCAAGTTTATGCATAAAAATAGTCTACAATCATTAATGTTTGCAAAACTCACATACTAAACCAGAACTCACATACTAAACGTAAATTGTACGAGATATACAAGTCAAATTGTATAATTCATCAATTAATTTAAGATTTTGAACCTCCAAAGCTCAGCATCTATTTTAAGAAACAGAAATCTAGATACCAAATTAAGAGTTCATAAAAACTTACTTGATAATTGCTATAGTTAAGGAAACAATTAGGCACAACCCTTCCAAGACCGAACTTATAATTTGAGGGGAAAAACAAATTACAGAGTTACAAACTTAAAGCAGATTCAGCAAAATATTTTTCTAATCTTTTTAAGATCAAAGAACACAAATGAAATTAAAGACAATTTTGGATAGACTGTGCCTCAGGACAACAACCAGGTTGATAGTGAGTCTTAACCACAAAAACTAATTGAATTTTCTTAGAATATAATCTAACACTCAAGTTTCAGAACCAAATTTAAAATAACTAATAATAATATGCTTAGAAAATGAATATACATGAGCATTTCAATACACACCAAAAGAAAACCAAAACATCTCGAATCATCAAGAAAATGAGACGAATAAAAAAGCCCCAACTCAAGTCTATTGAATTGCAGATAAAGTTGAGCACATTGAGGCTGGCAAAGGAATACATGATAAGGATAACAAGAGAACTACGATCAACCGAAACCTCACAAGCAGAAAACCTTTTCCTCCAAGGGGTTCGCTTTGCATACAGGGTTCATCAGGTAAACCAGAACAATTCACTAATTCAAACACATTGTTTTGACAATGACTAACCAATCAGAACCCTTTTTAGTATGCAGGTGGTTTCGATTCGGAGGCTATAGAGGCTTTTGAAGGACTGAAGAAAGCTGGGCTGAGTAGTCAAAGAAAATAGGCTCGAGTGTAAATTATAGGGAATGAATATTGTTGTCTGTTGCCAACTCAAATGCAGAATACATATTCAAATAGATGATGTAATATAACTGCTTGAATGGAAGTTTATATATATAATCAAACCCTATGCATC

mRNA sequence

AAAATCAAGCAAACCATAATAGTTTGGCTTCTCCTTTAGCCCATTTATTAAAAAATAAAGGAGAATGCCGAAGGAAAAGGATGAAGAATTGGCTATGGAGATCGATTGCTTGAAAAAAGATTTGGAAATTTCTCTACAAAAATCAATTTTCCTCGAAAGAGAAAATCAAGAACTCAGACTGGAATTGAATCGATTGAAATCCCAAATTCAGTCATTGAAAGCGCTCAACAATGAGAGAAAGTCCATTCTCTGGAAGAAATTTCATAGCTCCATGGATATGGCCGTCGCCGGAGCTGACTCCCCGCCGCTCAACCCTGCCACGGCGGCGGGTGATAAACGGGAGGTGACCAAATTCCCGAAACAGAGTAGTTGGGATGATGTGAAAGAGAGTCAGAGAATGACGGCGGTACCGGCATCGGCACCACCGCCGCCTCCGCCGCCACTTCCGAAGAAGCTGCTCGGAGGATCGAAGGCAGTGCGGCGTGTTCCGGAGGTGTTGGATTTGTATCGTACACTGACGAAAAGGGATGCACAGAAGGAAAATAAAGTGGCACACGGCGGAGCTCCGGTAGTGGCGTTCACTAAAAACATGATCGGCGAAATTGAAAACCGATCGGCCTATCTCTCGGCGATAAAATCTGAGGTAGAAACACATGGAGAGTTTGTGAACTGGTTGATCAAAGAAGTAGAAATGATAGCACCAAGAGACATATCAGAGGCGGAAAAGTTCGTGAAGTGGCTTGACGTGAAATTGGCATCACTGGTGGACGAGAGAGCAGTGCTAAAGCACTTCCCACGGTGGCCAGAGGCAAAAGCAGATGCGCTACGAGAGGCAGCATTCAGCTACCGAGACCTCAAGAGCTTAGAGAGCAAAGTGTGTATGTTTAGAGACAATCCAAAGGAAGAGATGAATGTTGTGTTGAAGAGAGCTCAAGCATTGCAAGACAGGCGAGAATGGTGGAGCAGAGTGTGAGTAATATGGAGAGGACGAGGGAGTTCAATTGTAAGAAGTATCAAGCTTTTCAAATCCCCTGCCAATGGATGTTCGATTCCGCTTTGCCTACTCAGATAAAGTTGAGCACATTGAGGCTGGCAAAGGAATACATGATAAGGATAACAAGAGAACTACGATCAACCGAAACCTCACAAGCAGAAAACCTTTTCCTCCAAGGGGTTCGCTTTGCATACAGGGTTCATCAGGTAAACCAGAACAATTCACTAATTCAAACACATTGTTTTGACAATGACTAACCAATCAGAACCCTTTTTAGTATGCAGGTGGTTTCGATTCGGAGGCTATAGAGGCTTTTGAAGGACTGAAGAAAGCTGGGCTGAGTAGTCAAAGAAAATAGGCTCGAGTGTAAATTATAGGGAATGAATATTGTTGTCTGTTGCCAACTCAAATGCAGAATACATATTCAAATAGATGATGTAATATAACTGCTTGAATGGAAGTTTATATATATAATCAAACCCTATGCATC

Coding sequence (CDS)

ATGCCGAAGGAAAAGGATGAAGAATTGGCTATGGAGATCGATTGCTTGAAAAAAGATTTGGAAATTTCTCTACAAAAATCAATTTTCCTCGAAAGAGAAAATCAAGAACTCAGACTGGAATTGAATCGATTGAAATCCCAAATTCAGTCATTGAAAGCGCTCAACAATGAGAGAAAGTCCATTCTCTGGAAGAAATTTCATAGCTCCATGGATATGGCCGTCGCCGGAGCTGACTCCCCGCCGCTCAACCCTGCCACGGCGGCGGGTGATAAACGGGAGGTGACCAAATTCCCGAAACAGAGTAGTTGGGATGATGTGAAAGAGAGTCAGAGAATGACGGCGGTACCGGCATCGGCACCACCGCCGCCTCCGCCGCCACTTCCGAAGAAGCTGCTCGGAGGATCGAAGGCAGTGCGGCGTGTTCCGGAGGTGTTGGATTTGTATCGTACACTGACGAAAAGGGATGCACAGAAGGAAAATAAAGTGGCACACGGCGGAGCTCCGGTAGTGGCGTTCACTAAAAACATGATCGGCGAAATTGAAAACCGATCGGCCTATCTCTCGGCGATAAAATCTGAGGTAGAAACACATGGAGAGTTTGTGAACTGGTTGATCAAAGAAGTAGAAATGATAGCACCAAGAGACATATCAGAGGCGGAAAAGTTCGTGAAGTGGCTTGACGTGAAATTGGCATCACTGGTGGACGAGAGAGCAGTGCTAAAGCACTTCCCACGGTGGCCAGAGGCAAAAGCAGATGCGCTACGAGAGGCAGCATTCAGCTACCGAGACCTCAAGAGCTTAGAGAGCAAAGTGTGTATGTTTAGAGACAATCCAAAGGAAGAGATGAATGTTGTGTTGAAGAGAGCTCAAGCATTGCAAGACAGGCGAGAATGGTGGAGCAGAGTGTGA

Protein sequence

MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKSILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAPPPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRREWWSRV

Homology

[Close]

BLAST of IVF0013647 vs. ExPASy Swiss-Prot
Match: Q9LI74 (Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36
Identity = 91/188 (48.40%), Postives = 117/188 (62.23%), Query Frame = 0


Query: 116 PASAPPPPPPPLPKKL---LGGSKAVRRVPEVLDLYRTLTKRDAQKE---NKVAHGGAPV 175
           P   PPPPPPP P  L    GG   V R PE+++ Y++L KR+++KE   + ++ G    
Sbjct: 694 PGGGPPPPPPP-PGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNS 753

Query: 176 VAFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVK 235
            A   NMIGEIENRS +L A+K++VET G+FV  L  EV   +  DI +   FV WLD +
Sbjct: 754 SAARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEE 813

Query: 236 LASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRA 295
           L+ LVDERAVLKHF  WPE KADALREAAF Y+DL  LE +V  F D+P       LK+ 
Sbjct: 814 LSFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKM 873

Query: 296 QALQDRRE 298
             L ++ E
Sbjct: 874 YKLLEKVE 879

[Close]

BLAST of IVF0013647 vs. ExPASy TrEMBL
Match: A0A5D3BE56 (Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00800 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.3e-159
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 298
           KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR E
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVE 297

[Close]

BLAST of IVF0013647 vs. ExPASy TrEMBL
Match: A0A1S3C5E9 (protein CHUP1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497059 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.3e-159
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 298
           KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR E
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVE 297

[Close]

BLAST of IVF0013647 vs. ExPASy TrEMBL
Match: A0A1S3C4V9 (protein CHUP1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497059 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.3e-159
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 298
           KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR E
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVE 297

[Close]

BLAST of IVF0013647 vs. ExPASy TrEMBL
Match: A0A5A7V2M1 (Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00750 PE=4 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 3.6e-158
Identity = 293/297 (98.65%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKEKDEELAMEI+CLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS
Sbjct: 1   MPKEKDEELAMEINCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSSMDMAVAGADSPPLNPAT AGDKREVTKFPKQSSWDDVKESQRMTAVPASAP
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATVAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDIS+ EKFVKWLDVKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISDVEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 298
           KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 297

[Close]

BLAST of IVF0013647 vs. ExPASy TrEMBL
Match: A0A0A0LVK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532360 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.3e-143
Identity = 267/297 (89.90%), Postives = 280/297 (94.28%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKE+DE LAMEI+CLKK+LEISLQKSIFLE+ENQELR ELNRL+SQIQS KA NNERKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSS+D++VAGADSPPL+PAT AGDKRE TK PKQSSWDDVKES RMT VPAS P
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKVAHGGAP VAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE IAPRDISE E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 298
           K+FPRWPEAKADALREAAFSYRDLK LESKVCMFRDNPKEEMNVVLKRAQALQDR E
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVE 297

[Close]

BLAST of IVF0013647 vs. NCBI nr
Match: XP_008457350.1 (PREDICTED: protein CHUP1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 570 bits (1468), Expect = 5.47e-203
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 297
           KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR E
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVE 297

[Close]

BLAST of IVF0013647 vs. NCBI nr
Match: XP_008457349.1 (PREDICTED: protein CHUP1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 570 bits (1468), Expect = 1.09e-202
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 297
           KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR E
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVE 297

[Close]

BLAST of IVF0013647 vs. NCBI nr
Match: TYJ97286.1 (protein CHUP1 [Cucumis melo var. makuwa])

HSP 1 Score: 570 bits (1468), Expect = 1.46e-202
Identity = 296/297 (99.66%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 297
           KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDR E
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVE 297

[Close]

BLAST of IVF0013647 vs. NCBI nr
Match: KAA0060029.1 (protein CHUP1 [Cucumis melo var. makuwa])

HSP 1 Score: 566 bits (1460), Expect = 2.59e-201
Identity = 293/297 (98.65%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKEKDEELAMEI+CLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS
Sbjct: 1   MPKEKDEELAMEINCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSSMDMAVAGADSPPLNPAT AGDKREVTKFPKQSSWDDVKESQRMTAVPASAP
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATVAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDIS+ EKFVKWLDVKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISDVEKFVKWLDVKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 297
           KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 297

[Close]

BLAST of IVF0013647 vs. NCBI nr
Match: XP_011658695.1 (protein CHUP1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 517 bits (1331), Expect = 3.95e-182
Identity = 267/297 (89.90%), Postives = 280/297 (94.28%), Query Frame = 0


Query: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60
           MPKE+DE LAMEI+CLKK+LEISLQKSIFLE+ENQELR ELNRL+SQIQS KA NNERKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120
           ILWKKFHSS+D++VAGADSPPL+PAT AGDKRE TK PKQSSWDDVKES RMT VPAS P
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKVAHGGAP VAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE IAPRDISE E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 297
           K+FPRWPEAKADALREAAFSYRDLK LESKVCMFRDNPKEEMNVVLKRAQALQDR E
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVE 297

[Close]

BLAST of IVF0013647 vs. TAIR 10
Match: AT1G07120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-61
Identity = 129/282 (45.74%), Postives = 179/282 (63.48%), Query Frame = 0


Query: 16  LKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKSILWKKFHSSMDMAVA 75
           L K+L+  L ++  LE+EN ELR E+ RL++Q+ +LK+  NERKS+LWKK  SS D +  
Sbjct: 14  LVKELQAYLVRNDKLEKENHELRQEVARLRAQVSNLKSHENERKSMLWKKLQSSYDGSNT 73

Query: 76  GADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAPPPPPPPLPKKLLGGS 135
              +     +  +  K +  + P             +     +  PPPPPPLP K   G 
Sbjct: 74  DGSNLKAPESVKSNTKGQEVRNP--------NPKPTIQGQSTATKPPPPPPLPSKRTLGK 133

Query: 136 KAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEIENRSAYLSAIKSEVE 195
           ++VRR PEV++ YR LTKR++   NK+   G    AF +NMIGEIENRS YLS IKS+ +
Sbjct: 134 RSVRRAPEVVEFYRALTKRESHMGNKINQNGVLSPAFNRNMIGEIENRSKYLSDIKSDTD 193

Query: 196 THGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVLKHFPRWPEAKADALR 255
            H + ++ LI +VE     DISE E FVKW+D +L+SLVDERAVLKHFP+WPE K D+LR
Sbjct: 194 RHRDHIHILISKVEAATFTDISEVETFVKWIDEELSSLVDERAVLKHFPKWPERKVDSLR 253

Query: 256 EAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRE 298
           EAA +Y+  K+L +++  F+DNPK+ +   L+R Q+LQDR E
Sbjct: 254 EAACNYKRPKNLGNEILSFKDNPKDSLTQALQRIQSLQDRLE 287

[Close]

BLAST of IVF0013647 vs. TAIR 10
Match: AT4G18570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 2.6e-44
Identity = 99/191 (51.83%), Postives = 127/191 (66.49%), Query Frame = 0


Query: 114 AVPASAPPPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVA-- 173
           +V  + PPPPPPP PK L   S  VRRVPEV++ Y +L +RD+    + + GG    A  
Sbjct: 329 SVSKAPPPPPPPPPPKSLSIASAKVRRVPEVVEFYHSLMRRDSTNSRRDSTGGGNAAAEA 388

Query: 174 -----FTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWL 233
                  ++MIGEIENRS YL AIK++VET G+F+ +LIKEV   A  DI +   FVKWL
Sbjct: 389 ILANSNARDMIGEIENRSVYLLAIKTDVETQGDFIRFLIKEVGNAAFSDIEDVVPFVKWL 448

Query: 234 DVKLASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVL 293
           D +L+ LVDERAVLKHF  WPE KADALREAAF Y DLK L S+   FR++P++  +  L
Sbjct: 449 DDELSYLVDERAVLKHF-EWPEQKADALREAAFCYFDLKKLISEASRFREDPRQSSSSAL 508

Query: 294 KRAQALQDRRE 298
           K+ QAL ++ E
Sbjct: 509 KKMQALFEKLE 518

[Close]

BLAST of IVF0013647 vs. TAIR 10
Match: AT3G25690.1 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 91/188 (48.40%), Postives = 117/188 (62.23%), Query Frame = 0


Query: 116 PASAPPPPPPPLPKKL---LGGSKAVRRVPEVLDLYRTLTKRDAQKE---NKVAHGGAPV 175
           P   PPPPPPP P  L    GG   V R PE+++ Y++L KR+++KE   + ++ G    
Sbjct: 694 PGGGPPPPPPP-PGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNS 753

Query: 176 VAFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVK 235
            A   NMIGEIENRS +L A+K++VET G+FV  L  EV   +  DI +   FV WLD +
Sbjct: 754 SAARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEE 813

Query: 236 LASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRA 295
           L+ LVDERAVLKHF  WPE KADALREAAF Y+DL  LE +V  F D+P       LK+ 
Sbjct: 814 LSFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKM 873

Query: 296 QALQDRRE 298
             L ++ E
Sbjct: 874 YKLLEKVE 879

[Close]

BLAST of IVF0013647 vs. TAIR 10
Match: AT3G25690.2 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 91/188 (48.40%), Postives = 117/188 (62.23%), Query Frame = 0


Query: 116 PASAPPPPPPPLPKKL---LGGSKAVRRVPEVLDLYRTLTKRDAQKE---NKVAHGGAPV 175
           P   PPPPPPP P  L    GG   V R PE+++ Y++L KR+++KE   + ++ G    
Sbjct: 694 PGGGPPPPPPP-PGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNS 753

Query: 176 VAFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVK 235
            A   NMIGEIENRS +L A+K++VET G+FV  L  EV   +  DI +   FV WLD +
Sbjct: 754 SAARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEE 813

Query: 236 LASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRA 295
           L+ LVDERAVLKHF  WPE KADALREAAF Y+DL  LE +V  F D+P       LK+ 
Sbjct: 814 LSFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKM 873

Query: 296 QALQDRRE 298
             L ++ E
Sbjct: 874 YKLLEKVE 879

[Close]

BLAST of IVF0013647 vs. TAIR 10
Match: AT3G25690.3 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37
Identity = 91/188 (48.40%), Postives = 117/188 (62.23%), Query Frame = 0


Query: 116 PASAPPPPPPPLPKKL---LGGSKAVRRVPEVLDLYRTLTKRDAQKE---NKVAHGGAPV 175
           P   PPPPPPP P  L    GG   V R PE+++ Y++L KR+++KE   + ++ G    
Sbjct: 553 PGGGPPPPPPP-PGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISSGTGNS 612

Query: 176 VAFTKNMIGEIENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVK 235
            A   NMIGEIENRS +L A+K++VET G+FV  L  EV   +  DI +   FV WLD +
Sbjct: 613 SAARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVSWLDEE 672

Query: 236 LASLVDERAVLKHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRA 295
           L+ LVDERAVLKHF  WPE KADALREAAF Y+DL  LE +V  F D+P       LK+ 
Sbjct: 673 LSFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEPALKKM 732

Query: 296 QALQDRRE 298
             L ++ E
Sbjct: 733 YKLLEKVE 738

The following BLAST results are available for this feature:

BLAST of IVF0013647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LI74	1.5e-36	48.40	Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1	[more]

BLAST of IVF0013647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BE56	4.3e-159	99.66	Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00800 ...	[more]
A0A1S3C5E9	4.3e-159	99.66	protein CHUP1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497059 ...	[more]
A0A1S3C4V9	4.3e-159	99.66	protein CHUP1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497059 ...	[more]
A0A5A7V2M1	3.6e-158	98.65	Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00750 ...	[more]
A0A0A0LVK7	3.3e-143	89.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532360 PE=4 SV=1	[more]

BLAST of IVF0013647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457350.1	5.47e-203	99.66	PREDICTED: protein CHUP1, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_008457349.1	1.09e-202	99.66	PREDICTED: protein CHUP1, chloroplastic isoform X1 [Cucumis melo]	[more]
TYJ97286.1	1.46e-202	99.66	protein CHUP1 [Cucumis melo var. makuwa]	[more]
KAA0060029.1	2.59e-201	98.65	protein CHUP1 [Cucumis melo var. makuwa]	[more]
XP_011658695.1	3.95e-182	89.90	protein CHUP1, chloroplastic isoform X2 [Cucumis sativus]	[more]

BLAST of IVF0013647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07120.1	2.4e-61	45.74	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G18570.1	2.6e-44	51.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G25690.1	1.1e-37	48.40	Hydroxyproline-rich glycoprotein family protein	[more]
AT3G25690.2	1.1e-37	48.40	Hydroxyproline-rich glycoprotein family protein	[more]
AT3G25690.3	1.1e-37	48.40	Hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..133
None	No IPR available	PANTHER	PTHR31342:SF48	CHUP1-LIKE PROTEIN	coord: 4..297
IPR040265	Protein CHUP1-like	PANTHER	PTHR31342	PROTEIN CHUP1, CHLOROPLASTIC	coord: 4..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013647.3	IVF0013647.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0009707	chloroplast outer membrane