IVF0013572 (gene) Melon (IVF77) v1

Overview


Name	IVF0013572
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	nucleolin 1 isoform X1
Location	chr04: 23224960 .. 23233498 (-)
RNA-Seq Expression	IVF0013572
Synteny	IVF0013572

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCATTTTCAATTTTTGTTTGTTGTTCATCTCAAATCTTCTCTCCCTCAGGCCTCAGCCATGTGCTCCGATAAAATCCGCTCTTTTTCCTGTTTAATTTCCATCCGCTTCCCTTAGTTGATCGCTCCGTCGAGTTTTCACAAGGAGTCGTTCTGGAACCAGCTAGGGTTCATGGAGGCTCCGTATTTGAGGGTTTCAATATCAATTGAACTCCGTTGTTAGTGTTTTAAAGTGAGCGTGTTTCTTCTTCTGTATATTGAAGTTTCGTGAAATGGACTCGTCGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGTACGGACTACTCTAGCCTTTTAACATTCCCGTACCTGAGTGGTTTTTGCCAAGCCATGAGATTATCGGTTTTCTGATGAGTCTGCCTGGGTGTCTTAGAATTTCTCTTAGGTTATTCATGTGGAGGCCATCTTCTTCTTCTTAACCGGTTGTTGAGGAATTTGTTTGGCTGAAGAAATGGGAATTTAGTATTCGCCCGGTTGTTATATATTTGCTAATGCCCAATGAAAATAACAAATAGTTCTGATTCTTTTATCTGCAAGTAATTACGTGCCTTAGGGGAAGTTTCTCTTATCTACTAAGGAATTCGCCGAAGGTTTATGGTTGATGTTAATGAGATGTATTCCAACTCAATGACGTATATTGTTCTTCATCCAAAGCAAACTGCATCTTTTAATGTGATATGGAATAGCCTATTTAAAATTTTGGTTAGCCGTTATCCTGTTTATCTGTCCGCCCCTCTTTCAGAAAACCTCTCTGTGCTAGGTGAACTTGCAACTGAGATAATTCTTTTAGCCTTTGATGGGCGGCTGTTCCCATTTCTCATCGATAAGATATAAGTACATTGAATTGTTGAAATGTATAAAAAAGGAAGATTCTAATTAGCAAACAAATAATAGTGAAGTTACAGACTAGCAGATAATTATAACCCAAATGTGATGATCAAAATATTGTTCTCCTAAATCAGCTAAGAAGAGTTGCTAATAACCTTGTAGAGACAAGAGGTTGAGATTGACGATTGGTTGAAAACATTTCCTGCTCTTTGTATTTGGATTAGATTTTTCTGTTGAGGGTGTATGAGAATATTATTATGAAGAAAGATCTTGGAGTACTTGTAATATCTTACATGAGGGTGTTTCAAGAGTTCTAAAAGAATTTAGTGGCAAATTCATCGTGTTTTTTATCTACTCGACTCCCAAAATATAAGATAGCCTTTATAATTTTCTCAACCCTAAAGTTAGCTTCTATCTAAACCAAATCGGTCCTGGGGGAACTTAGGTTGGGATCTGATCTGACTTGGTTTGGTTAAATTTTACCACCTGTTTCTTTGTGTATGGATACTGGAGAAAGCAGGAAATGCCTTTTGCATGTGTGTGGAAAGAGCTATTGTTATAGTCTCCTTCCCCTCTTGATATGTCTCCTCCTGCATACTATGTGATTTGTATCTTCACATCCAAAAATTTTCTTTCCAAATTTTCTGAGTTGGGATTTGAGATTAGTCTTAGAAGATTGGTAGCTTAAAGTAGGGAAAAGTTTTGCAAGTGGTCTAGAGCTTTGGGATCAACACGAACATCAGCTTTTCAGCAAGCTTTACATCTTCTTTAATTTGCAAATTAAACCATACCTCAAGGTTAAAGTGGAGTTCCACCAGCTTTTGGAAGTCTTTGAGAATTGTTGTTCTTGAGCCTCATATTTATATATTCTAAGGACAGGATCCCGTTTGATACCAGAAGATTCTTGAAGGGTTAATTGGTTGTTAGAGGAGGTGTTTTAACTCTAGAATTTGAGATTTTGAGGAACCAAGTATGGGGGAGTAGAATTTACTAACGATGAACAAAACAAGCCATGTTGGATCAAGTTAACTTGGCTCTTTTACAAGGGAAGGATATCAACGAGGAAGAGGTTGTCAATAACATTGTCAAGGAGCTTGGTGTTTTTGGCAGGGCTTTTGGAGGTGAATTTTTCTGTCTCTTCTAGAAGAAGAAAAAATAGCAGAGGAGAACATAATGCTTTAAGAGAAAGGTCAGCCATAACAAAGGTTCCCAAGATTTTCCAATTTTCTCAAAAAAGAAAACTTGACTGGGGCAACTTGACCAACATTTTTGTTTTATCACCGAGCTATAATTTTTATGGAAGCCATGGAATCCAATTTTTAAAGTCTTGCAAAATCTTCCACGCATGAAAAAATGCTTACGGAAGAATCAAGACTCGACTAGTTGAGGGACACGTTTATAATTTTTATCCATCCTTCATATGAAAGGGATGATAAATTCCTAGAATGCTTGATGGAGTCCAGCCTTCTCTTAGGTGGAGGAATCTAGATTGGTTCATCCTGCTGGATTTGAGGATTGCTGTATTACATGTACTGGTTGTGGCTATTACCTCTTGGAGAGTCGTGAGAGTTCTGTACTAGTTGTTCTTTTAGAGTTTTCTTCAAACCGCACTGGAGACATTCATCTTGACAAGAAGATGCCAGCTTTTAAGAGAGCATTAACCATAGCAATCTTGCTTATTCTTCTCTTACTTTTCTATTGTCTTAACTCTCAGTGCCCTTCTTTTTTACATTCTTTTGAAGATTGCATTTCCTTCGAACTTATTCTTCCAATTTTCACGTTCTTAAATCCCTGCCTTCTCAGAAAAAGTACTACGAACATGTGTTCGTCTTTTTGGAATTTGTGAGGCTTTTACTTGCTGTCTTGTGTACTTCTGAGTCACCTTAAGTAGAACACATTATTTAATATAATTGATGTCGATGGGATCCAGAGGAGTTAGATATCTCCACAAAAAGTACCAAGATCATTTTCTTTTTTGGAATCTTAGAGCCCTTTACTTGCTGTCCAGTGCACTCTTGAGTCACATTAAATAGAAGATGTTATAATCTACCTTAGGTATCTTTGAGGTATTCAAAGGCTTTTGAAGGCTGTGAATACTAGGTGAATTGGTTCATTCTGTTGTCTTGTTGCTAGATAAGGAAAGGTAATTGGAAAACGAGTTTATAATTGGCTGGGGAACTTTTTCCTCTATTTCTTGTTCCCCTGCCTTTACCATTCGTTTTCTTTCAAAAATTGTTTTGTGGCCTCTATTCTCTTGCCATTTGGGAGTTCCTCGTCTGTCTCTCTTGGACACAGTTGCTCCGCTTCTGATAGAGAATCTTCAGATATTATTGCTCTTCTAACCTTAATTGGTGATTTTGTTATTTGGGAGGGGAGAAGCTATCTTCGTTATGTAGCCCATTCCCTTTGGGTGGGTTTTCCTGTAGTTCTTCCTTTCATTGTCAGGTGAATTCTATGTCTTTAAGTCTTAGTATCTACTCACTTTTTTGGAAGATCATTGTCACAAAGAAGGCGAACTTTTTTGTGTTGTAGATAGCTTAAAAGGGTTACTATTCTGGATCGTGTTCGTAAGTTTGTGGCTAAAGTTGGGGTGTCTGGCCCAGTGTTACAAATGGGACTACCTGAGGACTTAGATCATCTTCATGTGGTCCTGTTTGTTTGCAAGATTGTTTTAGAGCAGCGTTTTTGAGTCATTCTTCTTCAGGTTTGCTTAGTGGAGAACTTGCAGTTCCATGTGCGAGGAGTTGCTCTCTCTGTCCTCTTTTCATGAACAAGGGTTGCGTGTTGTGGTTTGCATGTCTTTTATGCCTATTGTTTAGAGAGTTTGGATGGAAAGGAAAAATACAATTTTAAGTGGAGTGGAGCAATCTGTGGGTGAGGTTTGGTCCCTATTAGGTTGCATAGACATTCGAATGCTGCGAAAACTTTTTGTTTGTAAAGACTTTTGCAATTATCCTTCTTTGTCTCATTTTGTTTAACTGGAGCCCACTTAGAGTAGTTGGGATCTGATCTGGGGTTTCTTTTGTTGTATTTTTCGTGTATTCTTACATTTTTGTCAATGAAATCTTGGGTTCTTTTTTATATTAATTAAGAAAAGTAGTTCATAGAGCTGAATGCTTGGAAAATTATTGTGATATGTTGGCATTGTTTAGCCTTTGAATATTTTTTTTCCATTGTGAGGCGTTGCTGTATCAGATTGTGTAAACTTTCTTCTCTGTGTTTTTTATTTAATTTGGCATTATACTTCTGTATTCTTTTTAATATACTTGTTTGTTGCTAAAATTGTGTCCATGTTTCAATTTTTCTATATTTATCATAACATGGTTTGAATTTACTTCACAACTGGGATTTAGAGCCTCTGTTTGAAGAAATCAATTTTGATGAAATATAATGAATGCTATTTGATAGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGCCATTCTTTTGTATCTTGGTAATTTGATTCTCATCCCTCTTGTTCATATTTGTAATTTGTCTAGTAACTTGTGTCGAGTCATTCTTGCAGTCAGTTGACTAATTGTTTTAAGCTTCATTTCAATAGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATACGTGGAGCCGCCTGCTAAGTCTTCTGCCAATGAGGTGCCCAGACCAAAGTCTCCAGTAGCAGAACCAGATACAAGAAACAATTCTCACAATCTGGAGTCTGATTCAGAAAGAGGGAAGACTGAAAAATTATCTAGCAGACGACGTAATAGGGAATGGAGAGGAATTGCTAACGAGGAAACCCGTGTTATTCCTAAATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAATCATAGGAAAAGGAGCCGGCCTGACGATCAAGGCACTGAGGTTCACGATCTGACTTTTCTAATTTTGTACTAGCCGCAGTTAACTGGGTTTTAAAATGTGAAGTTTTTCTGGGAGGGGGAACCACCGGCCCCCAGGCCATATTATCTTCCTGGTTGTGAATGTATTCCTTTTGTTGTTTCCTATGAAAGTGAAAATTGATATTTTTTTCTTTTCCTTTTTGATAACGCAAAATTTAAATTGGTGAAAGGCAATGGGTGGTGGAGGGTTAGCTGAACAATTTCTTGTTGCTTCTCAGTTTTCAATACAATAGATTTGAAATCTTTAAAAACCCACAATTTTTTGTTTAAAACTGCATATCTTTATGTATTTAAAATTTTTAGTATCTCTGTTTAAATGAAGTCCTCAATTATGGTGTCTAAGACCTATCTCCCTCTTCTGCATGTCTCGTTTTTTTACCATGTTTGAACAAACTCTTAATTTCTTCTCCTTGACATGTCGATATGGCTATGCTTAAATTCAGGTTTTTCTTTATGTAACACAACTTTATTGTAATGCACCTTTTGGTGCTTTGGGAGCTTTCTCCTTCCATTCGTTTATCAATGAAATTGTTTCCCAATCCAAAAAAGGCATGCTTGATTAAATTTTGCGACACTGGTTTGATTGCTGTACTAAACTACCTTAGTTTCTGGTACTCTTAGTAATTGAAAATAACTTGGTCCAGAATATTGGATGGTTTATTGATATGCCTTATTCTAATGGGAAATAAATTCTCACGTATCTTGTTTTACAGAGGGAGGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAGGCCCTCTAATGCGGCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAGTCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTTATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCGCGTGATATGGATTTAACAGAGTCTAGTGGCCGACTTGGAGAATATGGAGTAACTTCTGTAGAGAACGACCAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAGAGAAGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTGCATCTGAAAATGAAGATGTTAATATTCGGGGTCACAGAGTATTTGATGATTCTTGGACTGCCGAATCTGGAGTAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGATAATTCTGATGATGAACGTGTGGCACAATATACACAGAAGGATCAACCTTCATTAGCTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGACCAAGGGCAAATTCCTGAACTTGCTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAGGGTACCAGATCTGCTGTGCAAGTTACGGAGAATGGCGAGCCAGTGACTCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAAAGGAGTTCCAGAAACCTCCTTTATCTGCTAATGGTGGGCTTTCTTTTCTGGTGTCTGGCTCTTCTATTTAAATAATAGTTTCCTTGCACGGCTCTTTTGTTTAGCTCTTTCTCATTCTATTTTTCCCGTATTTGATCATCAACAGTCTGTTTGGGCTCATACTTTATTATTCCCTTGTTAGTAATTCATTTTAAATAACTTTCTCTTGTTACCTAATGCAGGCCAATTTGCCAGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAACGTAAGAAGTCACTCTTTTTTTGCTTCTCTGAAGAAACTGGTGACTGTATATCATCTTACGATAATTTTTACATACAGGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTCTAAAAGTCATCATAGTAACCGACGCAACCACTGGGCAACCCAAAGGGTGAGGTGTTTCAGTTCTTTATTGTACCTCAGCTACCTTTAATCTCTATTTGTTTTCTCTACTGCAGACTACAAAAGTTTCCTATGTTACTTTTTAACAAATTGAGCATGATGTGATTGGAGCAGGTCGGCTTACGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCATTGTCTCTTGATGGGACCTCATTTATGTCTAGGATTCTAAAGGTACCCGTCGAATTTCTAACATTTTTCTTTGTAGTATGAAGCATTACTCAAAAAAGAAGTGTTGGCAAACTTAACCTTTGTTTTTTTATCCTTCATTTTCTTTACTTCAAGTTAGCATTCGTACCTTTAATATGCTTTTCTTCTTCTTCTATTTTTTCTTAGGAAGCTGTGAAGGAACCTGATATTCTTTCTTCTTTTTTTTTTAAATGGATTTTTGTTCAAGGATTTGGTTGCTTTTCGCATAATCATTGAATTTTTGCTGTTGCTGTTGTTCCATACCTAACTAAGCAGTGAGCGAAAGTTAAATAAAATTCTCATAAATAGTGAAATGAAAATGGATCTTGAAGCAAACATAAAAGATGTAATTTTCTTTCACTTTTGGGCTTTTGGTCAACTGTTCAACTAGTTTCTTCCACTGGTATTATTATTTGAACATCTTAATCGTGATGCAAAAGCCAGCATGATTAGAACGAACATTTTGTTGAGGTGTCTGCTGCATTATGTATGTAGTTAACGAATGAAGCTGCAAGTTTGATTGATTTGTCAATTGCAGGTCGTAAGGAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTACCTGGCCTCGTGCTGTGCGAGGCTCGCCATTTCCTACTTCGAGATTTACCAGAGTTCCATTCATGAGGGGTGTCCCTGGTGGATTTAGGGCTCGTCCCCCAATGAAACTCGGGGCCAGGAGCATGCAGTGGAAGCGTGATAATCAGACAGCAACTGCTGACAATGGTGCATCTCTCTCTGGTAATTCTATTCCCTCACCTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCAGACAAGTAGGAACCACTCGATTGTGAGAGAGTTGTTCAAAAATTATTTTGCAGAAAGAAAATCTCGCAGGTTCTCCCAAAATTTGTTTGTGTTTTGGTGATTCATGATTTTTTTGTGCGTCAGTGGAGGAGTTTGAGAAAGAAGACACCAGGTGGGGAAGTTTTAGCAGCAGTTTGTAGGAGGAGGGTTTTTTTTTTCCTTTTTGTTTCCTTTGGGGAATGGAAATTGGTGAGTTTTATAGGTAGGAAGAAACTGATGACGGCGGTTCGGATAAATTCATAATTTTGCTCCCCCTTCCGATTCTAGTAGATTAAAATTTGTGAATAGAGTAAGAGTAGAGACCTTTTCTTTTTTCTTTTTTCCCTTTCATTTTGTTTTAAGAGATATTGTGATATTTTGTAACTTTTGTTAATGTTGTGACAGAGGAGAGAAGGAAAAGAGGAAGAATACGAGTTTATATG

mRNA sequence

TTCTCATTTTCAATTTTTGTTTGTTGTTCATCTCAAATCTTCTCTCCCTCAGGCCTCAGCCATGTGCTCCGATAAAATCCGCTCTTTTTCCTGTTTAATTTCCATCCGCTTCCCTTAGTTGATCGCTCCGTCGAGTTTTCACAAGGAGTCGTTCTGGAACCAGCTAGGGTTCATGGAGGCTCCGTATTTGAGGGTTTCAATATCAATTGAACTCCGTTGTTAGTGTTTTAAAGTGAGCGTGTTTCTTCTTCTGTATATTGAAGTTTCGTGAAATGGACTCGTCGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGCCATTCTTTTGTATCTTGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATACGTGGAGCCGCCTGCTAAGTCTTCTGCCAATGAGGTGCCCAGACCAAAGTCTCCAGTAGCAGAACCAGATACAAGAAACAATTCTCACAATCTGGAGTCTGATTCAGAAAGAGGGAAGACTGAAAAATTATCTAGCAGACGACGTAATAGGGAATGGAGAGGAATTGCTAACGAGGAAACCCGTGTTATTCCTAAATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAATCATAGGAAAAGGAGCCGGCCTGACGATCAAGGCACTGAGAGGGAGGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAGGCCCTCTAATGCGGCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAGTCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTTATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCGCGTGATATGGATTTAACAGAGTCTAGTGGCCGACTTGGAGAATATGGAGTAACTTCTGTAGAGAACGACCAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAGAGAAGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTGCATCTGAAAATGAAGATGTTAATATTCGGGGTCACAGAGTATTTGATGATTCTTGGACTGCCGAATCTGGAGTAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGATAATTCTGATGATGAACGTGTGGCACAATATACACAGAAGGATCAACCTTCATTAGCTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGACCAAGGGCAAATTCCTGAACTTGCTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAGGGTACCAGATCTGCTGTGCAAGTTACGGAGAATGGCGAGCCAGTGACTCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAAAGGAGTTCCAGAAACCTCCTTTATCTGCTAATGGCCAATTTGCCAGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAACGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTCTAAAAGTCATCATAGTAACCGACGCAACCACTGGGCAACCCAAAGGGTCGGCTTACGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCATTGTCTCTTGATGGGACCTCATTTATGTCTAGGATTCTAAAGGTCGTAAGGAAAATGCTTCACAATTAGAAGGTGCTTCAACTGTTACCTGGCCTCGTGCTGTGCGAGGCTCGCCATTTCCTACTTCGAGATTTACCAGAGTTCCATTCATGAGGGGTGTCCCTGGTGGATTTAGGGCTCGTCCCCCAATGAAACTCGGGGCCAGGAGCATGCAGTGGAAGCGTGATAATCAGACAGCAACTGCTGACAATGGTGCATCTCTCTCTGGTAATTCTATTCCCTCACCTGGTGCTCGTAGTCTCACCTACGTTCGAACAGAACCTAAGCCAGCAGACAAGTAGGAACCACTCGATTGTGAGAGAGTTGTTCAAAAATTATTTTGCAGAAAGAAAATCTCGCAGGTTCTCCCAAAATTTGTTTGTGTTTTGGTGATTCATGATTTTTTTGTGCGTCAGTGGAGGAGTTTGAGAAAGAAGACACCAGGTGGGGAAGTTTTAGCAGCAGTTTGTAGGAGGAGGGTTTTTTTTTTCCTTTTTGTTTCCTTTGGGGAATGGAAATTGGTGAGTTTTATAGGTAGGAAGAAACTGATGACGGCGGTTCGGATAAATTCATAATTTTGCTCCCCCTTCCGATTCTAGTAGATTAAAATTTGTGAATAGAGTAAGAGTAGAGACCTTTTCTTTTTTCTTTTTTCCCTTTCATTTTGTTTTAAGAGATATTGTGATATTTTGTAACTTTTGTTAATGTTGTGACAGAGGAGAGAAGGAAAAGAGGAAGAATACGAGTTTATATG

Coding sequence (CDS)

ATGGACTCGTCGGAGATGGGGAGTGAGGATCGTGTCGATGATCGTACGTTCAAGGTTGATTTTACTGGCGAGGGAATGGCGAAGCTCAGAGAGAGGATAAAGCTGAAGATGAAGGAATTCATGGGCGATTATACTGACGACACTCTCGTGGAATACGTGATTGTCTTGTTGAGGAACGGCAGGCGCAGAGAAGAAGCACAGAATGAACTTAATGTCTTTTTGGCAGACGATAGCCATTCTTTTGTATCTTGGTTGTGGGACCATCTGGCTTCAAGTATGGATTTATACGTGGAGCCGCCTGCTAAGTCTTCTGCCAATGAGGTGCCCAGACCAAAGTCTCCAGTAGCAGAACCAGATACAAGAAACAATTCTCACAATCTGGAGTCTGATTCAGAAAGAGGGAAGACTGAAAAATTATCTAGCAGACGACGTAATAGGGAATGGAGAGGAATTGCTAACGAGGAAACCCGTGTTATTCCTAAATCTGAAGTTAGTCGTGTCAAGCATTCTTCTCCTGAACAAGTTCCTAATCATAGGAAAAGGAGCCGGCCTGACGATCAAGGCACTGAGAGGGAGGCTGCCTTTCAGGTAAGCATTGCTGCCCCTCGACGGCTGCTCCAGTTTGCAATGCGAGATGCTGTGGCCACCACGAGGCCCTCTAATGCGGCTAAGGAGCCCCATTCAAAACGTCTTCGTTCAGTAGTTTCTGCATCCAATAGTGACACAACTAATCGTCCTAGGAGGCTTCAGTCTGTTGCAAAAGTTCCAAATCCAATGGCAACTGTTATCAAGGCTGTGACGGAGGCATCTGAAGATGTGGTCAGAGTTAAATCCTCCAGTGTTTTTGACCGACTTGGTCGTCAATCGCGTGATATGGATTTAACAGAGTCTAGTGGCCGACTTGGAGAATATGGAGTAACTTCTGTAGAGAACGACCAATATGGGGATATGAATCATTCAGAGGATCGACCATACTCAGCTACCTATCTTGAGAGAAGCAATTATATTGGGAAATATTCTCGTGATGAGCCCATGTTTGAACCTGAAACTGGATTAGCATCAGATTCTGCATCTGAAAATGAAGATGTTAATATTCGGGGTCACAGAGTATTTGATGATTCTTGGACTGCCGAATCTGGAGTAAGAAAGGGAAGCAATTTACGGACTGTGGCATTCAGGGCAGTTGATAATTCTGATGATGAACGTGTGGCACAATATACACAGAAGGATCAACCTTCATTAGCTGCAAATTCCTCACGTGACATTGTAAATATCTCTGTGAATGTTAATACTTGGAAACCACCTCACTATCAGGACCAAGGGCAAATTCCTGAACTTGCTGGTCAAAAGTTTTTGCAGGAGAGTGAGTTACAGGGTACCAGATCTGCTGTGCAAGTTACGGAGAATGGCGAGCCAGTGACTCTTGTTAACCAACGGAAAACACCAGCATCTAACCTTCAAAAGGAGTTCCAGAAACCTCCTTTATCTGCTAATGGCCAATTTGCCAGCACTCGTCCTTTAGAGGAAGCTGATGCTCGAACCATTTTTGTGAGCAACGTTCACTTTGCTGCAACGAAGGATAGCCTGTCTAGGCATTTTAACAAGTTTGGAGAAGTTCTAAAAGTCATCATAGTAACCGACGCAACCACTGGGCAACCCAAAGGGTCGGCTTACGTGGAGTTCATGAGAAAAGAATCTGCAGAGAATGCATTGTCTCTTGATGGGACCTCATTTATGTCTAGGATTCTAAAGGTCGTAAGGAAAATGCTTCACAATTAG

Protein sequence

MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRKMLHN

Homology

[Close]

BLAST of IVF0013572 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.8e-16
Identity = 55/150 (36.67%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 445 ELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQK------PPLSAN 504
           EL G + +++ EL+  ++ V+  E         +       LQ E +K      PP +A 
Sbjct: 98  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 157

Query: 505 GQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAY 564
               S     EADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 158 PVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAY 217

Query: 565 VEFMRKESAENALSLDGTSFMSRILKVVRK 589
           +EF  KES   +L+LD + F  R +KVV K
Sbjct: 218 IEFCDKESVRTSLALDESLFRGRQIKVVPK 238

[Close]

BLAST of IVF0013572 vs. ExPASy Swiss-Prot
Match: Q7ZXB8 (Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.8e-16
Identity = 55/150 (36.67%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 445 ELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQK------PPLSAN 504
           EL G + +++ EL+  ++ V+  E         +       LQ E +K      PP +A 
Sbjct: 97  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 156

Query: 505 GQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAY 564
               S     EADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 157 PVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAY 216

Query: 565 VEFMRKESAENALSLDGTSFMSRILKVVRK 589
           +EF  KES   +L+LD + F  R +KVV K
Sbjct: 217 IEFSDKESVRTSLALDESLFRGRQIKVVPK 237

[Close]

BLAST of IVF0013572 vs. ExPASy Swiss-Prot
Match: Q6NVP7 (Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 7.6e-16
Identity = 55/150 (36.67%), Postives = 78/150 (52.00%), Query Frame = 0


Query: 445 ELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQK------PPLSAN 504
           EL G + +++ EL+  ++ V+  E         +       LQ E +K      PP +A 
Sbjct: 98  ELTGDQTIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMSPPPGNAG 157

Query: 505 GQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAY 564
               S     EADAR+I+V NV + AT + L  HF+  G V +V I+ D  TG PKG AY
Sbjct: 158 PVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAY 217

Query: 565 VEFMRKESAENALSLDGTSFMSRILKVVRK 589
           +EF  KES   +L+LD + F  R +KVV K
Sbjct: 218 IEFSDKESVRTSLALDESLFRGRQIKVVPK 238

[Close]

BLAST of IVF0013572 vs. ExPASy Swiss-Prot
Match: Q28165 (Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 4.2e-14
Identity = 52/157 (33.12%), Postives = 79/157 (50.32%), Query Frame = 0


Query: 438 QDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEFQK----- 497
           ++ G +    G   +++ EL+  ++ V+  E         +       LQ E +K     
Sbjct: 100 EESGLVEGDPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEVEKQMNMS 159

Query: 498 -PPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTG 557
            PP +A     S     EADAR+I+V NV + AT + L  HF+  G V +V I+ D  +G
Sbjct: 160 PPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 219

Query: 558 QPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589
            PKG AY+EF  KES   +L+LD + F  R +KV+ K
Sbjct: 220 HPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPK 247

[Close]

BLAST of IVF0013572 vs. ExPASy Swiss-Prot
Match: Q86U42 (Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 4.2e-14
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 435 PHYQDQGQIPELA----GQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPASNLQKEF 494
           P  Q++ + P L     G   +++ EL+  ++ V+  E         +       LQ E 
Sbjct: 93  PGSQEEEEEPGLVEGDPGDGAIEDPELEAIKARVREME---------EEAEKLKELQNEV 152

Query: 495 QK------PPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 554
           +K      PP +A     S     EADAR+I+V NV + AT + L  HF+  G V +V I
Sbjct: 153 EKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTI 212

Query: 555 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589
           + D  +G PKG AY+EF  KES   +L+LD + F  R +KV+ K
Sbjct: 213 LCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPK 247

[Close]

BLAST of IVF0013572 vs. ExPASy TrEMBL
Match: A0A5A7U3W4 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00490 PE=4 SV=1)

HSP 1 Score: 1130.9 bits (2924), Expect = 0.0e+00
Identity = 588/588 (100.00%), Postives = 588/588 (100.00%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240
           RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS
Sbjct: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240

Query: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300
           DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR
Sbjct: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300

Query: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360
           LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN
Sbjct: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360

Query: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420
           EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR
Sbjct: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420

Query: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480
           DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK
Sbjct: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480

Query: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540
           TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL
Sbjct: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540

Query: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589
           KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 588

[Close]

BLAST of IVF0013572 vs. ExPASy TrEMBL
Match: A0A1S3CFE4 (nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1130.9 bits (2924), Expect = 0.0e+00
Identity = 588/588 (100.00%), Postives = 588/588 (100.00%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240
           RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS
Sbjct: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240

Query: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300
           DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR
Sbjct: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300

Query: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360
           LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN
Sbjct: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360

Query: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420
           EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR
Sbjct: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420

Query: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480
           DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK
Sbjct: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480

Query: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540
           TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL
Sbjct: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540

Query: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589
           KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 588

[Close]

BLAST of IVF0013572 vs. ExPASy TrEMBL
Match: A0A0A0L9I7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV=1)

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 566/589 (96.10%), Postives = 576/589 (97.79%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+SSEMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP  KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360
           R  EYG T VEND+YGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420
           NEDVNI+GHRVFDDSWTAESGVRKGSNLRTVAFRAV+NSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQR 480
           RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQV ENGEPVTLVNQR
Sbjct: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQR 480

Query: 481 KTPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540
           KTPASNLQ+EFQKPPLSANGQFA TRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV
Sbjct: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540

Query: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589
           LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589

[Close]

BLAST of IVF0013572 vs. ExPASy TrEMBL
Match: A0A5D3BPZ5 (Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00280 PE=4 SV=1)

HSP 1 Score: 1056.2 bits (2730), Expect = 5.0e-305
Identity = 560/588 (95.24%), Postives = 560/588 (95.24%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240
           RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS
Sbjct: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240

Query: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300
           DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR
Sbjct: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300

Query: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360
           LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN
Sbjct: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360

Query: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420
           EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR
Sbjct: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420

Query: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480
           DI                            FLQESELQGTRSAVQVTENGEPVTLVNQRK
Sbjct: 421 DI----------------------------FLQESELQGTRSAVQVTENGEPVTLVNQRK 480

Query: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540
           TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL
Sbjct: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540

Query: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589
           KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 560

[Close]

BLAST of IVF0013572 vs. ExPASy TrEMBL
Match: A0A1S3CFZ8 (uncharacterized protein LOC103500309 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1)

HSP 1 Score: 1056.2 bits (2730), Expect = 5.0e-305
Identity = 560/588 (95.24%), Postives = 560/588 (95.24%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240
           RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS
Sbjct: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240

Query: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300
           DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR
Sbjct: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300

Query: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360
           LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN
Sbjct: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360

Query: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420
           EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR
Sbjct: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420

Query: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480
           DI                            FLQESELQGTRSAVQVTENGEPVTLVNQRK
Sbjct: 421 DI----------------------------FLQESELQGTRSAVQVTENGEPVTLVNQRK 480

Query: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540
           TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL
Sbjct: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540

Query: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589
           KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 560

[Close]

BLAST of IVF0013572 vs. NCBI nr
Match: XP_008461790.1 (PREDICTED: nucleolin 1 isoform X1 [Cucumis melo] >KAA0048335.1 nucleolin 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1138 bits (2943), Expect = 0.0
Identity = 588/588 (100.00%), Postives = 588/588 (100.00%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240
           RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS
Sbjct: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240

Query: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300
           DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR
Sbjct: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300

Query: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360
           LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN
Sbjct: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360

Query: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420
           EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR
Sbjct: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420

Query: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480
           DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK
Sbjct: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480

Query: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540
           TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL
Sbjct: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540

Query: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 588
           KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 588

[Close]

BLAST of IVF0013572 vs. NCBI nr
Match: XP_011651783.1 (nucleolin 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 1095 bits (2831), Expect = 0.0
Identity = 566/589 (96.10%), Postives = 576/589 (97.79%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           M+SSEMGSEDRVDDRTFKVDFTG+GMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MNSSEMGSEDRVDDRTFKVDFTGDGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAK+SANEVP  KSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKASANEVPTQKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRR REWRGIANEETRV+P+SEVSRVKHSSPEQVP HRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRTREWRGIANEETRVVPRSEVSRVKHSSPEQVPGHRK 180

Query: 181 RSRPDD-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 240
           RSRPDD QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNA+KEPHSKRLRSVVSASN
Sbjct: 181 RSRPDDHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNASKEPHSKRLRSVVSASN 240

Query: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300
           SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG
Sbjct: 241 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSG 300

Query: 301 RLGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASE 360
           R  EYG T VEND+YGDMNHSEDRPYSATYLER NYIGKYSRDEPMFEPETGLASDS SE
Sbjct: 301 RPSEYGATFVENDEYGDMNHSEDRPYSATYLERGNYIGKYSRDEPMFEPETGLASDSTSE 360

Query: 361 NEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSS 420
           NEDVNI+GHRVFDDSWTAESGVRKGSNLRTVAFRAV+NSDDERVAQYTQKDQPSLAANSS
Sbjct: 361 NEDVNIQGHRVFDDSWTAESGVRKGSNLRTVAFRAVENSDDERVAQYTQKDQPSLAANSS 420

Query: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQR 480
           RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQV ENGEPVTLVNQR
Sbjct: 421 RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVMENGEPVTLVNQR 480

Query: 481 KTPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540
           KTPASNLQ+EFQKPPLSANGQFA TRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV
Sbjct: 481 KTPASNLQEEFQKPPLSANGQFAGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV 540

Query: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 588
           LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 LKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589

[Close]

BLAST of IVF0013572 vs. NCBI nr
Match: XP_008461791.1 (PREDICTED: uncharacterized protein LOC103500309 isoform X2 [Cucumis melo] >TYK01130.1 nucleolin 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1063 bits (2749), Expect = 0.0
Identity = 560/588 (95.24%), Postives = 560/588 (95.24%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240
           RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS
Sbjct: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240

Query: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300
           DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR
Sbjct: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300

Query: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360
           LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN
Sbjct: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360

Query: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420
           EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR
Sbjct: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420

Query: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480
           DI                            FLQESELQGTRSAVQVTENGEPVTLVNQRK
Sbjct: 421 DI----------------------------FLQESELQGTRSAVQVTENGEPVTLVNQRK 480

Query: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540
           TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL
Sbjct: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540

Query: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 588
           KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 560

[Close]

BLAST of IVF0013572 vs. NCBI nr
Match: XP_008461792.1 (PREDICTED: uncharacterized protein LOC103500309 isoform X3 [Cucumis melo])

HSP 1 Score: 1056 bits (2730), Expect = 0.0
Identity = 557/588 (94.73%), Postives = 557/588 (94.73%), Query Frame = 0


Query: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60
           MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG
Sbjct: 1   MDSSEMGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNG 60

Query: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120
           RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT
Sbjct: 61  RRREEAQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDT 120

Query: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180
           RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK
Sbjct: 121 RNNSHNLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRK 180

Query: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240
           RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS
Sbjct: 181 RSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNS 240

Query: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300
           DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR
Sbjct: 241 DTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGR 300

Query: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360
           LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN
Sbjct: 301 LGEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASEN 360

Query: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420
           EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR
Sbjct: 361 EDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSR 420

Query: 421 DIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRK 480
           DI                               ESELQGTRSAVQVTENGEPVTLVNQRK
Sbjct: 421 DI-------------------------------ESELQGTRSAVQVTENGEPVTLVNQRK 480

Query: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540
           TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL
Sbjct: 481 TPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVL 540

Query: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 588
           KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 KVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 557

[Close]

BLAST of IVF0013572 vs. NCBI nr
Match: XP_038904558.1 (nucleolin 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1043 bits (2696), Expect = 0.0
Identity = 538/584 (92.12%), Postives = 560/584 (95.89%), Query Frame = 0


Query: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65
           MGSED VDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRR+EE
Sbjct: 1   MGSEDPVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRKEE 60

Query: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125
           AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPP KSSANEVPRPKSPVAEPDT NNSH
Sbjct: 61  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPTKSSANEVPRPKSPVAEPDTINNSH 120

Query: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185
           NLESDSERGK+EKLSSRRRNREWRGIAN+ETRV+P+SEVSRVKHSSPEQVP+HRKRSR D
Sbjct: 121 NLESDSERGKSEKLSSRRRNREWRGIANDETRVVPRSEVSRVKHSSPEQVPSHRKRSRAD 180

Query: 186 D-QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASNSDTTN 245
           D QGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPS+AAKEPHSKRLRSVVS SNSDTTN
Sbjct: 181 DHQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSSAAKEPHSKRLRSVVSTSNSDTTN 240

Query: 246 RPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSSSVFDRLGRQSRDMDLTESSGRLGEY 305
            PRRLQSVAKVPNPMATVIKAVTEA+EDVVRVKSSSVFDRLGRQSRDMDLTESSG+L EY
Sbjct: 241 CPRRLQSVAKVPNPMATVIKAVTEAAEDVVRVKSSSVFDRLGRQSRDMDLTESSGQLAEY 300

Query: 306 GVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGLASDSASENEDVN 365
           GVTSVEND+YGDMNH+EDRPYSATYLER+NY GKY+ +E MFEPET LASDSASENEDVN
Sbjct: 301 GVTSVENDKYGDMNHTEDRPYSATYLERNNYSGKYALNEAMFEPETELASDSASENEDVN 360

Query: 366 IRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAANSSRDIVN 425
           I+GHR+F+DSWTAESGVR+G NLRTV FRAV+NSDDERV QY QKDQPSL ANSSRDIVN
Sbjct: 361 IQGHRIFEDSWTAESGVRRGGNLRTVPFRAVENSDDERVTQYKQKDQPSLVANSSRDIVN 420

Query: 426 ISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQVTENGEPVTLVNQRKTPAS 485
           ISVNVNTWKPPHYQD GQIPELAGQKFLQESELQ TRSAVQV ENGEPVTLVNQRK PA 
Sbjct: 421 ISVNVNTWKPPHYQDPGQIPELAGQKFLQESELQRTRSAVQVMENGEPVTLVNQRKRPAP 480

Query: 486 NLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVII 545
           +LQKEFQKPPLSANGQF  TRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEV+KVII
Sbjct: 481 DLQKEFQKPPLSANGQFPGTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVVKVII 540

Query: 546 VTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 588
           VTDATTGQP+GSAYVEFMRKESAENALSLDGTSFMSRILKVVRK
Sbjct: 541 VTDATTGQPRGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 584

[Close]

BLAST of IVF0013572 vs. TAIR 10
Match: AT3G12640.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 382.9 bits (982), Expect = 4.7e-106
Identity = 258/591 (43.65%), Postives = 348/591 (58.88%), Query Frame = 0


Query: 6   MGSEDRVDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREE 65
           MGS D VDDRTF  DF+ EG+AKL+E +K K+KE+MGDYTDD LVEYVIVLLRNGRR+EE
Sbjct: 1   MGSADLVDDRTFNGDFSVEGVAKLKEMVKDKLKEYMGDYTDDILVEYVIVLLRNGRRKEE 60

Query: 66  AQNELNVFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPVAEPDTRNNSH 125
           A NEL +FL DDS SFV+WLWDHLA S+D Y      SS  E    KS +          
Sbjct: 61  ANNELKIFLGDDSDSFVAWLWDHLAESVDEYF-----SSNVEGTTIKSSLISSHEDKALV 120

Query: 126 NLESDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHRKRSRPD 185
            L+S+ ++G+++K +  RR R+WR            + VS +      +  + RKRSR D
Sbjct: 121 PLDSEYDKGRSDKSNGARRGRQWRS---------QPTNVSEIPPLLSSEAQSQRKRSRTD 180

Query: 186 DQGTE-REAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSAS--NSDT 245
           D   E REA   VS    RRLLQFA+RDA+A +RP+N++ E   KRLRSVVS S  NS  
Sbjct: 181 DSRNEQREAKPDVS----RRLLQFAVRDALAISRPANSSTESSLKRLRSVVSTSTQNSSD 240

Query: 246 TNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSS-SVFDRLGRQSRDMDLTESSGRL 305
            +  R+++SVA+V NPMATV+KAV EA+ED  + KS  SVFDR+   S   +  + +  L
Sbjct: 241 PDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRIS-HSTGSETLDQNMVL 300

Query: 306 GEYGVTSVENDQYGDMNHSEDRPYSATYLERSNYIGKYSRDE----PMFEPETGLASDSA 365
           GE      E+  +     +    Y+ +      Y    + ++    P F  + G    S 
Sbjct: 301 GEVSPKDEESRNFSQGQEAVQLQYTQSLANNGVYFENMTTNDTGLNPDFSSDRGRLGSSV 360

Query: 366 SENEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQPSLAAN 425
           + +      G+R+              +N  ++  R VD+S   +   Y Q   P +A  
Sbjct: 361 NVSHPSTYLGNRI--------------NNPNSLQHRLVDDSKRVKGTNY-QNRLPEVA-- 420

Query: 426 SSRDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQV-TENGEPVTLV 485
           +     + S N++T K    ++Q +IP++  Q+++ E  L  + +  Q+ T+     T+ 
Sbjct: 421 TKHKTASFSGNIDTGKTVKLEEQRKIPDVGLQRYMDEGRLVSSEATTQLSTQKILGDTIG 480

Query: 486 NQRKTPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKF 545
           N    PA+++ KE      S  G  ++TRPLE+A +RTIFV+NVHF ATKDSLSRHFNKF
Sbjct: 481 NGNVKPAASV-KEESTTNKSVPGTLSTTRPLEDASSRTIFVANVHFGATKDSLSRHFNKF 540

Query: 546 GEVLKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVR 588
           GEVLK  IVTD  TGQP GSAY+EF RKE+AENALSLDGTSFMSRILK+V+
Sbjct: 541 GEVLKAFIVTDPATGQPSGSAYIEFTRKEAAENALSLDGTSFMSRILKIVK 554

[Close]

BLAST of IVF0013572 vs. TAIR 10
Match: AT2G24350.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 92.8 bits (229), Expect = 9.8e-19
Identity = 155/600 (25.83%), Postives = 249/600 (41.50%), Query Frame = 0


Query: 12  VDDRTFKVDFTGEGMAKLRERIKLKMKEFMGDYTDDTLVEYVIVLLRNGRRREEAQNELN 71
           VD  TF +    E  ++L+  I   +  F  DY+DD L EYV VL+ NG+ + +A  +L 
Sbjct: 5   VDGLTFPMSRVSESASRLKTIISDMLPRFTDDYSDD-LSEYVTVLVCNGKSQRQASEDLE 64

Query: 72  VFLADDSHSFVSWLWDHLASSMDLYVEPPAKSSANEVPRPKSPV--AEPDT--------- 131
            FL + S  FV  LW+ L             S +N    PK+ V     DT         
Sbjct: 65  AFLKEQSWKFVVCLWELLVKYF---------SQSNSASGPKTDVDFGSNDTLIKQGLSSR 124

Query: 132 RNNSHNLE-SDSERGKTEKLSSRRRNREWRGIANEETRVIPKSEVSRVKHSSPEQVPNHR 191
           + + ++ + +D      E+L S         I + E  V PK  V ++K S  E + +  
Sbjct: 125 KYDDYDCKAADGTNSMNEQLIS-----VTAPIDDIEAPVSPK--VEKMKMSRQELIDSPC 184

Query: 192 KRSRPDDQGTEREAAFQVSIAAPRRLLQFAMRDAVATTRPSNAAKEPHSKRLRSVVSASN 251
            R+R       R+     S    R++L+  +  A       N AK   S   RS      
Sbjct: 185 TRAR------RRKKENWNSSGYSRKVLRSVIVSATQQPCDRNPAKYEKSMNERS------ 244

Query: 252 SDTTNRPRRLQSVAKVPNPMATVIKAVTEASEDVVRVKSS----SVFDRLGRQSRDMDLT 311
              T + R      ++ +  A   +AV+    D    + +    SV+DRLGR S +  L 
Sbjct: 245 --RTLKKRPYSPERELDSRFAPSGRAVSARYHDASLHQETEPHVSVWDRLGRASSECVLD 304

Query: 312 ESSGRLGEYGVTSVE---NDQYGDMNHSEDRPYSATYLERSNYIGKYSRDEPMFEPETGL 371
             S  L ++G+ + E   + Q+G +  +      +   +R      Y    P F+ +   
Sbjct: 305 TESRTLSKFGIQTRETKVHQQHGPVFPAAYSEQHSEIFQREVLAVGYRHRVPQFDKDRKP 364

Query: 372 ASDSASENEDVNIRGHRVFDDSWTAESGVRKGSNLRTVAFRAVDNSDDERVAQYTQKDQ- 431
            S++ +  E      H  ++ S       RK    R     + ++ +   V QY Q +Q 
Sbjct: 365 KSETITSTEP-----HIAYNLS-------RK----RRYGMVSPNSGEFSYVPQYKQAEQD 424

Query: 432 ---PSLAANSS--RDIVNISVNVNTWKPPHYQDQGQIPELAGQKFLQESELQGTRSAVQV 491
              PSL ++ S  +DI +   NV                   ++ +QE EL+        
Sbjct: 425 FEKPSLLSHQSTKQDIFSEIKNV-------------------KEKMQELELR-------- 484

Query: 492 TENGEPVTLVNQRKTPASNLQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATK 551
                    + Q K       +E +  P S   Q+      + +++R I V+NV++AA K
Sbjct: 485 ---------IIQSKQLKKQKVEERKPSPQSGESQYQE----DVSESRVIHVTNVYYAAKK 517

Query: 552 DSLSRHF-NKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKV 586
           +++S  F +K G V  VI+VTD  T  PKG+A+V F  KES   A++L GT F SR +KV
Sbjct: 545 EAISMFFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSGTMFYSRPIKV 517

[Close]

BLAST of IVF0013572 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 73.2 bits (178), Expect = 8.0e-13
Identity = 38/81 (46.91%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 508 EEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESA 567
           EE DAR++FV NV +A T + + +HF   G V +V I+TD   GQPKG AYVEF+  E+ 
Sbjct: 87  EEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTD-KFGQPKGFAYVEFVEVEAV 146

Query: 568 ENALSLDGTSFMSRILKVVRK 589
           + AL L+ +    R LKV++K
Sbjct: 147 QEALQLNESELHGRQLKVLQK 166

[Close]

BLAST of IVF0013572 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 70.5 bits (171), Expect = 5.2e-12
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 486 LQKEFQKPPLSANGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIV 545
           L+ E++K  +++     S    EE D+R+I+V NV +A T + + +HF   G V +V I+
Sbjct: 117 LEFEYEKEIINSG---VSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTIL 176

Query: 546 TDATTGQPKGSAYVEFMRKESAENALSLDGTSFMSRILKVVRK 589
           TD   GQPKG AYVEF+  E+ +N+L L+ +    R +KV  K
Sbjct: 177 TD-KFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAK 215

[Close]

BLAST of IVF0013572 vs. TAIR 10
Match: AT5G51120.3 (polyadenylate-binding protein 1 )

HSP 1 Score: 70.1 bits (170), Expect = 6.8e-12
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 0


Query: 498 NGQFASTRPLEEADARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSA 557
           +G   S    EE D+R+I+V NV +A T + + +HF   G V +V I+TD   GQPKG A
Sbjct: 3   HGGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD-KFGQPKGFA 62

Query: 558 YVEFMRKESAENALSLDGTSFMSRILKVVRK 589
           YVEF+  E+ +N+L L+ +    R +KV  K
Sbjct: 63  YVEFVEVEAVQNSLILNESELHGRQIKVSAK 92

The following BLAST results are available for this feature:

BLAST of IVF0013572 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9DDY9	5.8e-16	36.67	Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=...	[more]
Q7ZXB8	5.8e-16	36.67	Polyadenylate-binding protein 2-B OS=Xenopus laevis OX=8355 GN=pabpn1-b PE=2 SV=...	[more]
Q6NVP7	7.6e-16	36.67	Polyadenylate-binding protein 2 OS=Xenopus tropicalis OX=8364 GN=pabpn1 PE=2 SV=...	[more]
Q28165	4.2e-14	33.12	Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3	[more]
Q86U42	4.2e-14	33.54	Polyadenylate-binding protein 2 OS=Homo sapiens OX=9606 GN=PABPN1 PE=1 SV=3	[more]

BLAST of IVF0013572 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U3W4	0.0e+00	100.00	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2...	[more]
A0A1S3CFE4	0.0e+00	100.00	nucleolin 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500309 PE=4 SV=1	[more]
A0A0A0L9I7	0.0e+00	96.10	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G697930 PE=4 SV...	[more]
A0A5D3BPZ5	5.0e-305	95.24	Nucleolin 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]
A0A1S3CFZ8	5.0e-305	95.24	uncharacterized protein LOC103500309 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of IVF0013572 vs. NCBI nr


Match Name	Identity	Description
XP_008461790.1	100.00	PREDICTED: nucleolin 1 isoform X1 [Cucumis melo] >KAA0048335.1 nucleolin 1 isofo...	[more]
XP_011651783.1	96.10	nucleolin 1 isoform X1 [Cucumis sativus]	[more]
XP_008461791.1	95.24	PREDICTED: uncharacterized protein LOC103500309 isoform X2 [Cucumis melo] >TYK01...	[more]
XP_008461792.1	94.73	PREDICTED: uncharacterized protein LOC103500309 isoform X3 [Cucumis melo]	[more]
XP_038904558.1	92.12	nucleolin 1 isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0013572 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12640.1	4.7e-106	43.65	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G24350.1	9.8e-19	25.83	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G65260.1	8.0e-13	46.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G51120.2	5.2e-12	38.83	polyadenylate-binding protein 1	[more]
AT5G51120.3	6.8e-12	41.76	polyadenylate-binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 514..586 e-value: 3.2E-21 score: 86.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 515..583 e-value: 1.5E-17 score: 63.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 513..585 score: 16.926517
None	No IPR available	GENE3D	1.20.1390.10	PWI domain	coord: 12..96 e-value: 5.0E-10 score: 41.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..247
None	No IPR available	PANTHER	PTHR14738:SF32	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 6..589
IPR002483	PWI domain	PFAM	PF01480	PWI	coord: 29..92 e-value: 3.7E-7 score: 30.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 454..589 e-value: 3.3E-24 score: 87.6
IPR040366	Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14	PANTHER	PTHR14738	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 6..589
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 506..586

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013572.7	IVF0013572.7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900364	negative regulation of mRNA polyadenylation
biological_process	GO:0043488	regulation of mRNA stability
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008143	poly(A) binding
molecular_function	GO:0003676	nucleic acid binding