IVF0013558 (gene) Melon (IVF77) v1

Overview


Name	IVF0013558
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Wound-responsive family protein
Location	chr01: 2655736 .. 2656529 (-)
RNA-Seq Expression	IVF0013558
Synteny	IVF0013558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACCTTGTATAAAACGAAAAGCCCAACTCTACCCTCTCACCCCACTAAGAAAACACCGGTTTCGAGGGGCAACATCGTCCAGTAAAGAAAAGAGAATCCAGCCCGTCCACCGAAATAAAAAAACCAGGGGGCAGTTTCGAAATATATAAACAGCTCAACCCCATTGCACAATCAAGTTCGAAAACCGCAAAACTTTGAGAATTGAAGGGAAAAAGGAAGACGAAAAGAATGAGTTCATCAAGAAGAGCCTGGATTGTAGCCGCCAGTGTGGGCGTGGTGGAAGCATTAAAGGATCAAGGAATTTGCCGATGGAATCACACCATTAGATCGGCACATCAATACGCTAGAAACCATGTCAGATCGGTGCCTCAGGCCACTAGATTGACTGGTTCCTCCGCCGCCGTGGTTTCCAGCAAGCCACAGCAGAAGCAATCGGAAGAATCTTTGAGAACCGTCATGTATTTGAGCTGTTGGGGTCCCAATTAAAGTCCCTTTTTGTTCAAGATTTAGAGTCTGATACTAAAATCAGCCGCCGCCAGAGAGGATCTCGGCGAGGCTTTATATTTCCCTCTTGAACCACAGTGGGGTTGGGCGAAAAAAATCGCCGGTAGGGGATGTGTACTGTAACGATGTATATGAATTGGGTATTTGGTGTCAATGGAAATCATACAATTACCGGACTTGTTCAGTTCTCACTCCTTTTTATTTTCTTGCACAATAATTTTGATTTCTCGTTCTTCCACGAAAAGAGAGAGAGAAACCAATGGAACATGGAACAATCAAAATTTGGGAG

mRNA sequence

CTACCTTGTATAAAACGAAAAGCCCAACTCTACCCTCTCACCCCACTAAGAAAACACCGGTTTCGAGGGGCAACATCGTCCAGTAAAGAAAAGAGAATCCAGCCCGTCCACCGAAATAAAAAAACCAGGGGGCAGTTTCGAAATATATAAACAGCTCAACCCCATTGCACAATCAAGTTCGAAAACCGCAAAACTTTGAGAATTGAAGGGAAAAAGGAAGACGAAAAGAATGAGTTCATCAAGAAGAGCCTGGATTGTAGCCGCCAGTGTGGGCGTGGTGGAAGCATTAAAGGATCAAGGAATTTGCCGATGGAATCACACCATTAGATCGGCACATCAATACGCTAGAAACCATGTCAGATCGGTGCCTCAGGCCACTAGATTGACTGGTTCCTCCGCCGCCGTGGTTTCCAGCAAGCCACAGCAGAAGCAATCGGAAGAATCTTTGAGAACCGTCATGTATTTGAGCTGTTGGGGTCCCAATTAAAGTCCCTTTTTGTTCAAGATTTAGAGTCTGATACTAAAATCAGCCGCCGCCAGAGAGGATCTCGGCGAGGCTTTATATTTCCCTCTTGAACCACAGTGGGGTTGGGCGAAAAAAATCGCCGGTAGGGGATGTGTACTGTAACGATGTATATGAATTGGGTATTTGGTGTCAATGGAAATCATACAATTACCGGACTTGTTCAGTTCTCACTCCTTTTTATTTTCTTGCACAATAATTTTGATTTCTCGTTCTTCCACGAAAAGAGAGAGAGAAACCAATGGAACATGGAACAATCAAAATTTGGGAG

Coding sequence (CDS)

ATGAGTTCATCAAGAAGAGCCTGGATTGTAGCCGCCAGTGTGGGCGTGGTGGAAGCATTAAAGGATCAAGGAATTTGCCGATGGAATCACACCATTAGATCGGCACATCAATACGCTAGAAACCATGTCAGATCGGTGCCTCAGGCCACTAGATTGACTGGTTCCTCCGCCGCCGTGGTTTCCAGCAAGCCACAGCAGAAGCAATCGGAAGAATCTTTGAGAACCGTCATGTATTTGAGCTGTTGGGGTCCCAATTAA

Protein sequence

MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVVSSKPQQKQSEESLRTVMYLSCWGPN

Homology

[Close]

BLAST of IVF0013558 vs. ExPASy TrEMBL
Match: A0A5D3C6J9 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003730 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.5e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKPQQKQSEESLRTVMYLSCWGPN 86
          SSKPQQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of IVF0013558 vs. ExPASy TrEMBL
Match: A0A1S3C1F8 (uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.5e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKPQQKQSEESLRTVMYLSCWGPN 86
          SSKPQQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of IVF0013558 vs. ExPASy TrEMBL
Match: A0A0A0K296 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046660 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.2e-31
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYA+NHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKPQQKQSEESLRT 76
          SSK QQKQSEESLRT
Sbjct: 61 SSKQQQKQSEESLRT 75

[Close]

BLAST of IVF0013558 vs. ExPASy TrEMBL
Match: A0A6J1HXF9 (uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28
Identity = 66/85 (77.65%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYA+NHVRSV QA +L+ +S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SSKPQQKQSEESLRTVMYLSCWGPN 86
          S + + KQSEESLRTVMYLSCWGPN
Sbjct: 61 SDQ-KWKQSEESLRTVMYLSCWGPN 84

[Close]

BLAST of IVF0013558 vs. ExPASy TrEMBL
Match: A0A6J1D1Q0 (uncharacterized protein LOC111016790 OS=Momordica charantia OX=3673 GN=LOC111016790 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.3e-28
Identity = 67/86 (77.91%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSS RR W+VAASVGVVEALKDQGICRWNH IRSA QYA++HVRSV QA +L+  SAA V
Sbjct: 1  MSSGRRGWVVAASVGVVEALKDQGICRWNHAIRSAQQYAKSHVRSVSQAKKLSSPSAAAV 60

Query: 61 S-SKPQQKQSEESLRTVMYLSCWGPN 86
          S S  + KQSEESLRTVMYLSCWGPN
Sbjct: 61 SVSDKKLKQSEESLRTVMYLSCWGPN 86

[Close]

BLAST of IVF0013558 vs. NCBI nr
Match: XP_008455356.1 (PREDICTED: uncharacterized protein LOC103495543 [Cucumis melo] >KAA0031603.1 Wound-responsive family protein [Cucumis melo var. makuwa] >TYK07055.1 Wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 172 bits (437), Expect = 3.30e-54
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85
          SSKPQQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of IVF0013558 vs. NCBI nr
Match: XP_011658732.1 (uncharacterized protein LOC101213259 [Cucumis sativus])

HSP 1 Score: 168 bits (426), Expect = 1.58e-52
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYA+NHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85
          SSK QQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of IVF0013558 vs. NCBI nr
Match: XP_038888463.1 (uncharacterized protein LOC120078299 [Benincasa hispida])

HSP 1 Score: 162 bits (410), Expect = 4.36e-50
Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWN +IRSAHQYA+NHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85
          S K QQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SGKQQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of IVF0013558 vs. NCBI nr
Match: XP_022969311.1 (uncharacterized protein LOC111468355 [Cucurbita maxima])

HSP 1 Score: 135 bits (341), Expect = 1.47e-39
Identity = 66/85 (77.65%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYA+NHVRSV QA +L+ +S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85
          S + + KQSEESLRTVMYLSCWGPN
Sbjct: 61 SDQ-KWKQSEESLRTVMYLSCWGPN 84

[Close]

BLAST of IVF0013558 vs. NCBI nr
Match: XP_023554652.1 (uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 hypothetical protein SDJN03_29066, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011949.1 hypothetical protein SDJN02_26857, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135 bits (339), Expect = 2.97e-39
Identity = 66/85 (77.65%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYA+NHVRSV QA +L+  S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85
          S + + KQSEESLRTVMYLSCWGPN
Sbjct: 61 SDQ-KWKQSEESLRTVMYLSCWGPN 84

[Close]

BLAST of IVF0013558 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 108.2 bits (269), Expect = 3.2e-24
Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQ-GICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAV 60
          MSS+ + W+VAAS+G VEALKDQ G+CRWN+ IRSA+QY RN++RSV QA +L+ SS   
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSS--- 60

Query: 61 VSSKPQQKQSEESLRTVMYLSCWGPN 86
          +    + KQ+EESLRTVMYLSCWGP+
Sbjct: 61 IDYTNKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of IVF0013558 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 105.1 bits (261), Expect = 2.7e-23
Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQ-GICRWNHTIRSAHQYARNHVRSVPQATRLTGS--SA 60
          MSS+ +AW VA S+G VEALKDQ G+CRWN+ +RS +Q+ RN+VRSV Q  R + S  SA
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 AVVSS--KPQQKQSEESLRTVMYLSCWGPN 86
          AV SS    + K++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of IVF0013558 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09
Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 2  SSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATR----LTGSSA 61
          +  + +W VA ++  VE LKDQG+ RWN+  R  H+ A   VR++   +R     + SSA
Sbjct: 3  AGKQASWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSA 62

Query: 62 AVVSSKP-QQKQSEESLRTVMYLSCWGP 85
            + SKP      E S    M LSC+GP
Sbjct: 63 TSIRSKPLSTTPFETSFEKAMGLSCFGP 90

The following BLAST results are available for this feature:

BLAST of IVF0013558 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0013558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6J9	9.5e-40	100.00	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C1F8	9.5e-40	100.00	uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=...	[more]
A0A0A0K296	6.2e-31	97.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046660 PE=4 SV=1	[more]
A0A6J1HXF9	1.3e-28	77.65	uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355...	[more]
A0A6J1D1Q0	8.3e-28	77.91	uncharacterized protein LOC111016790 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of IVF0013558 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455356.1	3.30e-54	100.00	PREDICTED: uncharacterized protein LOC103495543 [Cucumis melo] >KAA0031603.1 Wou...	[more]
XP_011658732.1	1.58e-52	97.65	uncharacterized protein LOC101213259 [Cucumis sativus]	[more]
XP_038888463.1	4.36e-50	94.12	uncharacterized protein LOC120078299 [Benincasa hispida]	[more]
XP_022969311.1	1.47e-39	77.65	uncharacterized protein LOC111468355 [Cucurbita maxima]	[more]
XP_023554652.1	2.97e-39	77.65	uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 ...	[more]

BLAST of IVF0013558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	3.2e-24	62.79	Wound-responsive family protein	[more]
AT4G10270.1	2.7e-23	62.22	Wound-responsive family protein	[more]
AT4G33560.1	2.3e-09	37.50	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..84 e-value: 3.4E-32 score: 111.3
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 1..85
None	No IPR available	PANTHER	PTHR33090:SF50	FAMILY PROTEIN, PUTATIVE-RELATED	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0013558.1	IVF0013558.1	mRNA