IVF0012885 (gene) Melon (IVF77) v1

Overview


Name	IVF0012885
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protodermal factor 1
Location	chr11: 2414050 .. 2415477 (+)
RNA-Seq Expression	IVF0012885
Synteny	IVF0012885

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCATCTCTTAAATTCTCCTTTTCATTTTCCCCATCTTTAAATTCTTTCAACTACATCATCATCCCCATTCCCATGGATCCTCTCTTCAAGTTCAAGCTTTGCTTTCTTGCCTTATCTCTTTTTTCGGCCACCGCGTATGGATACACTGTCGTCTCTGGCTTTGTCTTTTGTGATAAATGTAAAGATGGCCAAGTATCTATATTCGATTTCGATTATCCCATCAATGGTATGATTAATTTGTTCACTAATGCTTCAAATGATGTTTTGAAATTTAGAAAGGAATTCAAATGTTTTGGATCATCCCAAAAAATTAAGTTATAGTTTAGTGTTTGAAGATGTTGTACTAAGTAACATTTTCGATCTTTGCAGGAGTTAAAGTTAAGATAGCTTGTGGGGATGGAAAAGGAGGAGTTACTGATTTGAGAGAGGAACCCACAAATTTTTTTGGAGGCTATACGATGAGTTTCGAAGGAACGCCTGACCTTAGCGGTTGCACTGCGACGGTTACTGGACCCGCACAGGGAGCGATGACAAACTGTAGCGCAGGTGGTGGACCGCCAAGGAGTCTTAAGTTGCTGTTTAGGTTGCTTGACCTGGAAATGTATGGGGTTGATCCTTTGGTATCTCAACCTGATCAACCAATGTCGTTTTGTTCGTCTCGTTCGGCTCCGGTTCCTGGGCCAAAACCACCATCTCCACCTTCTCTTCCGTCACTTCCGAAACTGCCGCCACTTCCAAAACTGCCGCCACTTCCACCATTTCCGCCGATGCGTCAGATGCCGCATACGCCGTTCTTGGAAGCTTCTGCTTGCCAACATGAGTGAGTGAAGTTTAATTACATTGTGATTCTTTTGTATATTTCTTTTCCCAAAAGTAACTTTGATCAAATTTGTTTTTCAGGAATTGGACAAACCCAGATTACAAATGCTATTGGAGGGCAGTGAACCCAGACACAAAGGTAGCGGTTATTTTTGGGGCAATAGCAGCGGAGCGATACGGAACAGACATGACCCTATGGAAGGGGCTACAAGGACGAGGGGACCCTTATAAGACCCTTTTAAGGGAAGCCATAACCGCGTTTCTCAATTCCTATAGTTCCCTTCATTTCCCCTACCATTCACTTTCTGTTGTCCAACACTTCAATTTGGCCTTAATGGACGGCTCTGAACGCTCCGTCCTCCACGCTGCCCTTCGCTTCAAACACGCCAACTCCGGCAACGGCCACGTCACCTGTAAATTCGATCCTTGCAAGTGACGTCATGATCATCGTACAAATTTTACCTTTTAGTTTCTAAGTTTTGGAAAATAAGTTTGTTTGGTAGTTAGTATTTTTAGTTTCCAGTTTTGAAAAATAAGTTTGTTTGGTAATTAGATTTTAGTATGTGTACTTTTGATCTCCAAATTTTTATGAATAAGAGCATCCGAT

mRNA sequence

AACCATCTCTTAAATTCTCCTTTTCATTTTCCCCATCTTTAAATTCTTTCAACTACATCATCATCCCCATTCCCATGGATCCTCTCTTCAAGTTCAAGCTTTGCTTTCTTGCCTTATCTCTTTTTTCGGCCACCGCGTATGGATACACTGTCGTCTCTGGCTTTGTCTTTTGTGATAAATGTAAAGATGGCCAAGTATCTATATTCGATTTCGATTATCCCATCAATGGAGTTAAAGTTAAGATAGCTTGTGGGGATGGAAAAGGAGGAGTTACTGATTTGAGAGAGGAACCCACAAATTTTTTTGGAGGCTATACGATGAGTTTCGAAGGAACGCCTGACCTTAGCGGTTGCACTGCGACGGTTACTGGACCCGCACAGGGAGCGATGACAAACTGTAGCGCAGGTGGTGGACCGCCAAGGAGTCTTAAGTTGCTGTTTAGGTTGCTTGACCTGGAAATGTATGGGGTTGATCCTTTGGTATCTCAACCTGATCAACCAATGTCGTTTTGTTCGTCTCGTTCGGCTCCGGTTCCTGGGCCAAAACCACCATCTCCACCTTCTCTTCCGTCACTTCCGAAACTGCCGCCACTTCCAAAACTGCCGCCACTTCCACCATTTCCGCCGATGCGTCAGATGCCGCATACGCCGTTCTTGGAAGCTTCTGCTTGCCAACATGAGAATTGGACAAACCCAGATTACAAATGCTATTGGAGGGCAGTGAACCCAGACACAAAGGTAGCGGTTATTTTTGGGGCAATAGCAGCGGAGCGATACGGAACAGACATGACCCTATGGAAGGGGCTACAAGGACGAGGGGACCCTTATAAGACCCTTTTAAGGGAAGCCATAACCGCGTTTCTCAATTCCTATAGTTCCCTTCATTTCCCCTACCATTCACTTTCTGTTGTCCAACACTTCAATTTGGCCTTAATGGACGGCTCTGAACGCTCCGTCCTCCACGCTGCCCTTCGCTTCAAACACGCCAACTCCGGCAACGGCCACGTCACCTGTAAATTCGATCCTTGCAAGTGACGTCATGATCATCGTACAAATTTTACCTTTTAGTTTCTAAGTTTTGGAAAATAAGTTTGTTTGGTAGTTAGTATTTTTAGTTTCCAGTTTTGAAAAATAAGTTTGTTTGGTAATTAGATTTTAGTATGTGTACTTTTGATCTCCAAATTTTTATGAATAAGAGCATCCGAT

Coding sequence (CDS)

ATGGATCCTCTCTTCAAGTTCAAGCTTTGCTTTCTTGCCTTATCTCTTTTTTCGGCCACCGCGTATGGATACACTGTCGTCTCTGGCTTTGTCTTTTGTGATAAATGTAAAGATGGCCAAGTATCTATATTCGATTTCGATTATCCCATCAATGGAGTTAAAGTTAAGATAGCTTGTGGGGATGGAAAAGGAGGAGTTACTGATTTGAGAGAGGAACCCACAAATTTTTTTGGAGGCTATACGATGAGTTTCGAAGGAACGCCTGACCTTAGCGGTTGCACTGCGACGGTTACTGGACCCGCACAGGGAGCGATGACAAACTGTAGCGCAGGTGGTGGACCGCCAAGGAGTCTTAAGTTGCTGTTTAGGTTGCTTGACCTGGAAATGTATGGGGTTGATCCTTTGGTATCTCAACCTGATCAACCAATGTCGTTTTGTTCGTCTCGTTCGGCTCCGGTTCCTGGGCCAAAACCACCATCTCCACCTTCTCTTCCGTCACTTCCGAAACTGCCGCCACTTCCAAAACTGCCGCCACTTCCACCATTTCCGCCGATGCGTCAGATGCCGCATACGCCGTTCTTGGAAGCTTCTGCTTGCCAACATGAGAATTGGACAAACCCAGATTACAAATGCTATTGGAGGGCAGTGAACCCAGACACAAAGGTAGCGGTTATTTTTGGGGCAATAGCAGCGGAGCGATACGGAACAGACATGACCCTATGGAAGGGGCTACAAGGACGAGGGGACCCTTATAAGACCCTTTTAAGGGAAGCCATAACCGCGTTTCTCAATTCCTATAGTTCCCTTCATTTCCCCTACCATTCACTTTCTGTTGTCCAACACTTCAATTTGGCCTTAATGGACGGCTCTGAACGCTCCGTCCTCCACGCTGCCCTTCGCTTCAAACACGCCAACTCCGGCAACGGCCACGTCACCTGTAAATTCGATCCTTGCAAGTGA

Protein sequence

MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACGDGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK

Homology

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BLAST of IVF0012885 vs. ExPASy TrEMBL
Match: A0A5D3BLG6 (Protodermal factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001410 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 9.6e-186
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
           MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG
Sbjct: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60

Query: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
           DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL
Sbjct: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120

Query: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP 180
           LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP
Sbjct: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP 180

Query: 181 PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL 240
           PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL
Sbjct: 181 PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL 240

Query: 241 WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR 300
           WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR
Sbjct: 241 WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR 300

Query: 301 FKHANSGNGHVTCKFDPCK 320
           FKHANSGNGHVTCKFDPCK
Sbjct: 301 FKHANSGNGHVTCKFDPCK 319

[Close]

BLAST of IVF0012885 vs. ExPASy TrEMBL
Match: A0A1S3C647 (uncharacterized protein LOC103497304 OS=Cucumis melo OX=3656 GN=LOC103497304 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 9.6e-186
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
           MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG
Sbjct: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60

Query: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
           DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL
Sbjct: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120

Query: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP 180
           LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP
Sbjct: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP 180

Query: 181 PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL 240
           PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL
Sbjct: 181 PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL 240

Query: 241 WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR 300
           WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR
Sbjct: 241 WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR 300

Query: 301 FKHANSGNGHVTCKFDPCK 320
           FKHANSGNGHVTCKFDPCK
Sbjct: 301 FKHANSGNGHVTCKFDPCK 319

[Close]

BLAST of IVF0012885 vs. ExPASy TrEMBL
Match: E5GC12 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 1.0e-134
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 82  MSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQ 141
           MSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQ
Sbjct: 1   MSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQ 60

Query: 142 PMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQH 201
           PMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQH
Sbjct: 61  PMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQH 120

Query: 202 ENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITA 261
           ENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITA
Sbjct: 121 ENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITA 180

Query: 262 FLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK 320
           FLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK
Sbjct: 181 FLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK 238

[Close]

BLAST of IVF0012885 vs. ExPASy TrEMBL
Match: A0A6J1JC51 (uncharacterized protein LOC111483701 OS=Cucurbita maxima OX=3661 GN=LOC111483701 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 5.5e-125
Identity = 226/322 (70.19%), Postives = 259/322 (80.43%), Query Frame = 0


Query: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
           MD L K  LCFLA +L SATA+GY VV+G VFCD+CKDGQ+S+  FDYP+NGVKV +ACG
Sbjct: 1   MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISM--FDYPMNGVKVMVACG 60

Query: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
           DG GGVT LREE TN FG +TM F+G PDLSGC ATV G  +GA T+C   G PPRSL+L
Sbjct: 61  DGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRL 120

Query: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKP---PSPPSLPSLPKLPPLPKLP 180
           +FRL  +EMY VD L+SQP QPMSFCS+   PVP P P   P PP+LP   K+PPLP+LP
Sbjct: 121 MFRLFSMEMYVVDSLLSQPTQPMSFCSASVHPVPAPAPVVMPPPPNLPPPLKMPPLPQLP 180

Query: 181 PLPPFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTD 240
           PLPP P   Q+P  PFLE SACQHENWTNPDYKCYWRAVNPDTKV V+FG +AA RYGTD
Sbjct: 181 PLPPLP---QLPPMPFLEVSACQHENWTNPDYKCYWRAVNPDTKVGVVFGLLAANRYGTD 240

Query: 241 MTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHA 300
           +TLW GLQGRGDPY+TLLREAITAFLNSY+S+HFPY +LSVV+  N AL+ GS+R+VLH 
Sbjct: 241 LTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEGLNWALL-GSQRAVLHT 300

Query: 301 ALRFKHANSGNGHVTCKFDPCK 320
           ALRFK ANSGN HVTCKFDPC+
Sbjct: 301 ALRFKRANSGNSHVTCKFDPCQ 316

[Close]

BLAST of IVF0012885 vs. ExPASy TrEMBL
Match: A0A6J1FXU0 (uncharacterized protein LOC111448725 OS=Cucurbita moschata OX=3662 GN=LOC111448725 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.6e-122
Identity = 225/322 (69.88%), Postives = 256/322 (79.50%), Query Frame = 0


Query: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
           MD L    LCFLA +L SATA+GY VV+G VFCD+CKDGQ+S+  FDYPINGVKV +ACG
Sbjct: 1   MDSLTNLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISM--FDYPINGVKVMVACG 60

Query: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
           DG GGVT LREE TN FG +TM F+G PDLSGC ATV G  +GA T+C   G PPRSL+L
Sbjct: 61  DGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRL 120

Query: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKP---PSPPSLPSLPKLPPLPKLP 180
           +FRL  +EMY VD L+SQP Q MSFCS+   PVP P P   PSPP+LP   K+ PLP+LP
Sbjct: 121 MFRLFSMEMYVVDSLLSQPAQSMSFCSASVHPVPVPAPVVMPSPPNLPPPSKMLPLPQLP 180

Query: 181 PLPPFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTD 240
           PLPP PPM      PFLEASACQHENWTNP YKCYWRAVNPD KV V+FG +AA RYGTD
Sbjct: 181 PLPPLPPM------PFLEASACQHENWTNPRYKCYWRAVNPDMKVGVVFGVLAANRYGTD 240

Query: 241 MTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHA 300
           +TLW GLQGRGDPY+TLLREAITAFLNSY+S+HFPY +LSVV+  N AL+ GS+R+VLH 
Sbjct: 241 LTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPALSVVEGLNWALL-GSQRAVLHT 300

Query: 301 ALRFKHANSGNGHVTCKFDPCK 320
           ALRFK ANSGNGHVTCKFDPC+
Sbjct: 301 ALRFKRANSGNGHVTCKFDPCQ 313

[Close]

BLAST of IVF0012885 vs. NCBI nr
Match: XP_008457656.1 (PREDICTED: uncharacterized protein LOC103497304 [Cucumis melo] >KAA0045709.1 protodermal factor 1 [Cucumis melo var. makuwa] >TYJ99571.1 protodermal factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 652 bits (1681), Expect = 3.54e-236
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
           MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG
Sbjct: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60

Query: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
           DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL
Sbjct: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120

Query: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP 180
           LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP
Sbjct: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLP 180

Query: 181 PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL 240
           PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL
Sbjct: 181 PFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTL 240

Query: 241 WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR 300
           WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR
Sbjct: 241 WKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALR 300

Query: 301 FKHANSGNGHVTCKFDPCK 319
           FKHANSGNGHVTCKFDPCK
Sbjct: 301 FKHANSGNGHVTCKFDPCK 319

[Close]

BLAST of IVF0012885 vs. NCBI nr
Match: ADN34010.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 484 bits (1246), Expect = 3.52e-171
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 82  MSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQ 141
           MSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQ
Sbjct: 1   MSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKLLFRLLDLEMYGVDPLVSQPDQ 60

Query: 142 PMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQH 201
           PMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQH
Sbjct: 61  PMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPPLPPFPPMRQMPHTPFLEASACQH 120

Query: 202 ENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITA 261
           ENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITA
Sbjct: 121 ENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITA 180

Query: 262 FLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK 319
           FLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK
Sbjct: 181 FLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCKFDPCK 238

[Close]

BLAST of IVF0012885 vs. NCBI nr
Match: XP_004147066.3 (protodermal factor 1 [Cucumis sativus] >KAE8651890.1 hypothetical protein Csa_006283 [Cucumis sativus])

HSP 1 Score: 453 bits (1165), Expect = 2.43e-157
Identity = 238/336 (70.83%), Postives = 266/336 (79.17%), Query Frame = 0


Query: 1   MDPLFKFKLCFLALSLFSAT-AYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIAC 60
           MD LFKFKLCFL  SL SAT AYG  ++SG VFCD+CKDGQ+S FDFD P+NGVKV +AC
Sbjct: 1   MDLLFKFKLCFLVASLLSATTAYGAAIISGTVFCDQCKDGQISFFDFDLPVNGVKVTLAC 60

Query: 61  GDGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLK 120
           GDGKGG  ++R++ TNF G + M  +GTPDL GCTA V+G A G+ TNC+  G PPRSLK
Sbjct: 61  GDGKGGFFNVRDDVTNFLGSFVMKVDGTPDLRGCTAKVSGAAPGSRTNCTVPGSPPRSLK 120

Query: 121 LLFRLLDLEMYG-VDPLVSQPDQPMSFCSSRSAPVPGPKPPSPPSLPSLPKLPPLPKLPP 180
           L+FRLL+LEMY  V PLVSQP QP  FCS R  PVPGPKPPSPPSLP +PKLPPLP LP 
Sbjct: 121 LVFRLLNLEMYSLVGPLVSQPAQPKPFCS-RHVPVPGPKPPSPPSLPPIPKLPPLPPLPQ 180

Query: 181 LPPFP-------------PMRQMPHTPFLEAS-ACQHENWTNPDYKCYWRAVNPDTKVAV 240
           LPP P             PMRQMPH P+LEAS ACQHENWTNPDYKCYWRAVNPDTKVAV
Sbjct: 181 LPPLPQLPPLPPLPSFPPPMRQMPHMPYLEASSACQHENWTNPDYKCYWRAVNPDTKVAV 240

Query: 241 IFGAIAAERYGTDMTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNL 300
           +FG IAA+RYGTD+TL KGLQGRGDPYKTLLREAITA LNSY+SLHFPY  LSVV+HFN 
Sbjct: 241 VFGVIAAKRYGTDLTLEKGLQGRGDPYKTLLREAITALLNSYNSLHFPYPPLSVVKHFNW 300

Query: 301 ALMDGSERSVLHAALRFKHANSGN-GHVTCKFDPCK 319
           AL+  S+RSVL  AL FKHANSG   HV+CKF+ CK
Sbjct: 301 ALLS-SQRSVLLTALHFKHANSGGYSHVSCKFERCK 334

[Close]

BLAST of IVF0012885 vs. NCBI nr
Match: XP_022985735.1 (uncharacterized protein LOC111483701 [Cucurbita maxima])

HSP 1 Score: 450 bits (1157), Expect = 2.11e-156
Identity = 226/322 (70.19%), Postives = 259/322 (80.43%), Query Frame = 0


Query: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
           MD L K  LCFLA +L SATA+GY VV+G VFCD+CKDGQ+S+FD  YP+NGVKV +ACG
Sbjct: 1   MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFD--YPMNGVKVMVACG 60

Query: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
           DG GGVT LREE TN FG +TM F+G PDLSGC ATV G  +GA T+C   G PPRSL+L
Sbjct: 61  DGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGTGEGATTDCGGAGSPPRSLRL 120

Query: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKP---PSPPSLPSLPKLPPLPKLP 180
           +FRL  +EMY VD L+SQP QPMSFCS+   PVP P P   P PP+LP   K+PPLP+LP
Sbjct: 121 MFRLFSMEMYVVDSLLSQPTQPMSFCSASVHPVPAPAPVVMPPPPNLPPPLKMPPLPQLP 180

Query: 181 PLPPFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTD 240
           PLPP P   Q+P  PFLE SACQHENWTNPDYKCYWRAVNPDTKV V+FG +AA RYGTD
Sbjct: 181 PLPPLP---QLPPMPFLEVSACQHENWTNPDYKCYWRAVNPDTKVGVVFGLLAANRYGTD 240

Query: 241 MTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHA 300
           +TLW GLQGRGDPY+TLLREAITAFLNSY+S+HFPY +LSVV+  N AL+ GS+R+VLH 
Sbjct: 241 LTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEGLNWALL-GSQRAVLHT 300

Query: 301 ALRFKHANSGNGHVTCKFDPCK 319
           ALRFK ANSGN HVTCKFDPC+
Sbjct: 301 ALRFKRANSGNSHVTCKFDPCQ 316

[Close]

BLAST of IVF0012885 vs. NCBI nr
Match: XP_023513005.1 (uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444 bits (1142), Expect = 4.04e-154
Identity = 224/322 (69.57%), Postives = 259/322 (80.43%), Query Frame = 0


Query: 1   MDPLFKFKLCFLALSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKIACG 60
           MD L K  LCFLA +L SATA+GY VV+G VFCD+CKDGQ+S+FD  YPINGVKV +ACG
Sbjct: 1   MDSLSKLHLCFLAAALLSATAHGYAVVTGTVFCDQCKDGQISMFD--YPINGVKVMVACG 60

Query: 61  DGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVTGPAQGAMTNCSAGGGPPRSLKL 120
           +G GGVT LREE TN FG +TM F+G PDLSGC ATV G  +GA T+C   G PPRSL+L
Sbjct: 61  NGNGGVTYLREETTNLFGSFTMRFDGMPDLSGCYATVGGIGEGATTDCGGAGSPPRSLRL 120

Query: 121 LFRLLDLEMYGVDPLVSQPDQPMSFCSSRSAPVPGPKP---PSPPSLPSLPKLPPLPKLP 180
           +FRL  +EMY VD L+SQP QPMSFCS+   PVP P P   P PP++P   K+PPLP+LP
Sbjct: 121 MFRLFSMEMYVVDSLLSQPAQPMSFCSASVHPVPVPAPVVMPPPPNVPPPFKMPPLPQLP 180

Query: 181 PLPPFPPMRQMPHTPFLEASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTD 240
           P+PP P   Q+P  PFLEASACQHENWTNPDYKCYWRAVNPD KV V+FG +AA RYGTD
Sbjct: 181 PIPPLP---QLPPMPFLEASACQHENWTNPDYKCYWRAVNPDMKVGVVFGVLAANRYGTD 240

Query: 241 MTLWKGLQGRGDPYKTLLREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHA 300
           +TLW GLQGRGDPY+TLLREAITAFLNSY+S+HFPY +LSVV+  N AL+ GS+R+VLH 
Sbjct: 241 LTLWNGLQGRGDPYRTLLREAITAFLNSYNSVHFPYPTLSVVEGLNWALL-GSQRAVLHT 300

Query: 301 ALRFKHANSGNGHVTCKFDPCK 319
           ALRFK ANSGN HVTCKFDPC+
Sbjct: 301 ALRFKRANSGNSHVTCKFDPCQ 316

[Close]

BLAST of IVF0012885 vs. TAIR 10
Match: AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 277.3 bits (708), Expect = 1.5e-74
Identity = 164/364 (45.05%), Postives = 211/364 (57.97%), Query Frame = 0


Query: 1   MDPLFKFKLCFLA---LSLFSATAYGYTVVSGFVFCDKCKDGQVSIFDFDYPINGVKVKI 60
           MDP     L F+A   L L +    GY  V+G VFCD+CKDG+ S+FDF  P++G+K+ +
Sbjct: 1   MDPNHNNLLIFVAFFVLCLATNGVTGYATVTGSVFCDQCKDGERSLFDF--PVSGIKISV 60

Query: 61  ACGDGKGGVTDLREEPTNFFGGYTMSFEGTPDLSGCTATVT-GPAQGAMTNCSAGGGPPR 120
            C D  G V   REE TN+ GGY M F+GTPDLS C A V+    Q   ++CS   GP +
Sbjct: 61  TCADENGQVYMSREETTNWLGGYVMRFDGTPDLSNCYAQVSDNGVQQDPSSCSIASGPAQ 120

Query: 121 SLKLLFRLLDLEMYGVDPLVSQPDQPMSFCSS-------------------------RSA 180
            LKL+F    +E +  D L++QP QP SFC                              
Sbjct: 121 KLKLMFSFFGIETFAADALLAQPVQPSSFCPKPPTAPVMPPPQVPVMPPPQVPVKPHPKV 180

Query: 181 PVPGPKPPS---PPSLPSL---------PKLPPLPKLPPL--PP---FPPMRQMPHTPFL 240
           PV  P PP+   PP +P +         P L P+  LPP+  PP    PP+ Q+P  PF+
Sbjct: 181 PVISPDPPATLPPPKVPVISPDPPTTLPPPLVPVINLPPVTSPPQFKLPPLPQIPPMPFV 240

Query: 241 EASACQHENWTNPDYKCYWRAVNPDTKVAVIFGAIAAERYGTDMTLWKGLQGRGDPYKTL 300
           E SAC H+ W  P+Y+CYWRA+ PDTKVAV FG +A   YGTDMT+ + L GRG+ YKTL
Sbjct: 241 EPSACSHQLWMKPEYRCYWRAIGPDTKVAVAFGLVAGRIYGTDMTVREALDGRGEAYKTL 300

Query: 301 LREAITAFLNSYSSLHFPYHSLSVVQHFNLALMDGSERSVLHAALRFKHANSGNGHVTCK 319
           LREA TA LNSY+SL FPY+S++V+ + NLAL+  SE  VL  A+RF  ANSG    TC+
Sbjct: 301 LREATTALLNSYNSLGFPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKANSG----TCR 358

The following BLAST results are available for this feature:

BLAST of IVF0012885 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0012885 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BLG6	9.6e-186	100.00	Protodermal factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123...	[more]
A0A1S3C647	9.6e-186	100.00	uncharacterized protein LOC103497304 OS=Cucumis melo OX=3656 GN=LOC103497304 PE=...	[more]
E5GC12	1.0e-134	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A6J1JC51	5.5e-125	70.19	uncharacterized protein LOC111483701 OS=Cucurbita maxima OX=3661 GN=LOC111483701...	[more]
A0A6J1FXU0	2.6e-122	69.88	uncharacterized protein LOC111448725 OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]

BLAST of IVF0012885 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457656.1	3.54e-236	100.00	PREDICTED: uncharacterized protein LOC103497304 [Cucumis melo] >KAA0045709.1 pro...	[more]
ADN34010.1	3.52e-171	100.00	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_004147066.3	2.43e-157	70.83	protodermal factor 1 [Cucumis sativus] >KAE8651890.1 hypothetical protein Csa_00...	[more]
XP_022985735.1	2.11e-156	70.19	uncharacterized protein LOC111483701 [Cucurbita maxima]	[more]
XP_023513005.1	4.04e-154	69.57	uncharacterized protein LOC111777579 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0012885 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16630.1	1.5e-74	45.05	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 27..99 e-value: 1.8E-7 score: 31.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..184
None	No IPR available	PANTHER	PTHR33210:SF24	OS05G0346700 PROTEIN	coord: 9..317
IPR039923	Protodermal factor 1	PANTHER	PTHR33210	PROTODERMAL FACTOR 1	coord: 9..317

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012885.1	IVF0012885.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane