IVF0012735 (gene) Melon (IVF77) v1

Overview


Name	IVF0012735
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein LITTLE ZIPPER 1-like
Location	chr09: 21421194 .. 21421711 (+)
RNA-Seq Expression	IVF0012735
Synteny	IVF0012735

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAGGCAAAAGTTAAGAAGCTGCCATAGAAGAATAATGTGCGTCAGTGCAACACAAAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAAGAGAAGTTCAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGGTTGCTTTTTCACACAACCCCATCGAACCTTTTTGATGGTTTTTTAGAAGACTTTTGTTGATGGGTTTTTTTCTTTTCTTTTTTCTTTTAAATTTTAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAGGAAATTGAGCTGAAGAATCTGCAGCTATATCTGGAGAACCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCGCATTTGGAACAGAGAAAGTGATGGGAATCATCAAAAGAGTGCATGGTTTTATTTCTGTTCTGAGTGATTTTTAGATGTATTGAACTCTTTATTCAATATATATGTGCCA

mRNA sequence

AAGAAAGGCAAAAGTTAAGAAGCTGCCATAGAAGAATAATGTGCGTCAGTGCAACACAAAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAAGAGAAGTTCAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAGGAAATTGAGCTGAAGAATCTGCAGCTATATCTGGAGAACCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCGCATTTGGAACAGAGAAAGTGATGGGAATCATCAAAAGAGTGCATGGTTTTATTTCTGTTCTGAGTGATTTTTAGATGTATTGAACTCTTTATTCAATATATATGTGCCA

Coding sequence (CDS)

ATGTGCGTCAGTGCAACACAAAGTGTTCTGTTTCATACAATTCAGAGTTCAAAGAACAAGAGAAGTTCAAAAAGATCAAAATTTCAAGTTCTGAGGCTTACAAGCAGGAGGAGATGTGAAGAGAAGCTGGGGAAGGAAATTGAGCTGAAGAATCTGCAGCTATATCTGGAGAACCAGACCATAATTGAAGAGAATGAGAAACTAAGAGAGAAAGCCAATATCCTTCATCAAGAGAATTTGGCTTTATTGACTGAGTTTCAGAAAAAATTCCCGCATTTGGAACAGAGAAAGTGA

Protein sequence

MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQTIIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK

Homology

[Close]

BLAST of IVF0012735 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 21 RSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQTIIEENEKLREKANILHQENL 80
          +S  ++  ++L LT RRR   K  KE+E++NL+L++ENQ+II ENE L++KA +LH EN 
Sbjct: 28 KSKTQTHLRILNLTRRRRL-LKEQKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENN 87

Query: 81 ALLTEFQKKF 91
          AL      K+
Sbjct: 88 ALFALLHPKY 96

[Close]

BLAST of IVF0012735 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-05
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 1   MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
           MC+S++++  F    +        +S  ++ RL+ RRR   +  K++E+ NL+LY+ENQ 
Sbjct: 44  MCLSSSET--FSDTPTRLVLYLKTQSHVRIPRLSRRRRMWRE-EKKMEMINLKLYVENQN 103

Query: 61  IIEENEKLREKANILHQENLALLTEFQKK 90
           II ENEKL++KA +LHQEN  L +  Q K
Sbjct: 104 IIRENEKLKKKALLLHQENKTLFSLLQTK 129

[Close]

BLAST of IVF0012735 vs. ExPASy TrEMBL
Match: A0A0A0KKF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.2e-39
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0


Query: 1  MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
          MCVSATQSVLFHTIQSSKN+RSSKRS FQVLRLT RRRCEEKLGK+IELKNLQLYLENQT
Sbjct: 1  MCVSATQSVLFHTIQSSKNRRSSKRSNFQVLRLT-RRRCEEKLGKDIELKNLQLYLENQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK
Sbjct: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 96

[Close]

BLAST of IVF0012735 vs. ExPASy TrEMBL
Match: A0A6J1E3C5 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.2e-35
Identity = 82/97 (84.54%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
          MC+SATQS+LFH IQ+SKN+R SKRSK QVLRLT RRRCEEKLGK+IELKNLQLYL+NQT
Sbjct: 1  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 98
          II+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of IVF0012735 vs. ExPASy TrEMBL
Match: A0A6J1DZF5 (protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 75/96 (78.12%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 1   MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRC-EEKLGKEIELKNLQLYLENQ 60
           MC+SAT+S  FH I +SKN+R  KRSK QV RLTSRRRC EEK+GK+IELKNLQLYLENQ
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTSRRRCTEEKVGKDIELKNLQLYLENQ 76

Query: 61  TIIEENEKLREKANILHQENLALLTEFQKKFPHLEQ 96
           TIIEENEKLRE+ANILHQENLAL+TE QKKF HL++
Sbjct: 77  TIIEENEKLRERANILHQENLALMTELQKKFQHLDR 112

[Close]

BLAST of IVF0012735 vs. ExPASy TrEMBL
Match: A0A6J1E319 (protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-28
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 1   MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
           MC+SAT+S  FH I +SKN+R  KRSK QV RLT RR  EEK+GK+IELKNLQLYLENQT
Sbjct: 17  MCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTRRRCTEEKVGKDIELKNLQLYLENQT 76

Query: 61  IIEENEKLREKANILHQENLALLTEFQKKFPHLEQ 96
           IIEENEKLRE+ANILHQENLAL+TE QKKF HL++
Sbjct: 77  IIEENEKLRERANILHQENLALMTELQKKFQHLDR 111

[Close]

BLAST of IVF0012735 vs. ExPASy TrEMBL
Match: A0A6P9E725 (protein LITTLE ZIPPER 1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109010615 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.8e-22
Identity = 59/93 (63.44%), Postives = 76/93 (81.72%), Query Frame = 0


Query: 1  MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
          MC +  + +   T++SS+ K+ SKRSK QV  LT R+ CEEK+ K++ELKNL+LYLEN++
Sbjct: 1  MCTNNAEKIPPGTVRSSERKQRSKRSKVQVQWLTCRKNCEEKVDKDVELKNLKLYLENKS 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHL 94
          IIEENEKLR KAN+LHQENLAL++EFQKKFP L
Sbjct: 61 IIEENEKLRRKANLLHQENLALMSEFQKKFPDL 93

[Close]

BLAST of IVF0012735 vs. NCBI nr
Match: KAE8647881.1 (hypothetical protein Csa_000025 [Cucumis sativus])

HSP 1 Score: 175 bits (444), Expect = 6.72e-55
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
          MCVSATQSVLFHTIQSSKN+RSSKRS FQVLRLTSRRRCEEKLGK+IELKNLQLYLENQT
Sbjct: 1  MCVSATQSVLFHTIQSSKNRRSSKRSNFQVLRLTSRRRCEEKLGKDIELKNLQLYLENQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97
          IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK
Sbjct: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97

[Close]

BLAST of IVF0012735 vs. NCBI nr
Match: XP_022922429.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata])

HSP 1 Score: 155 bits (391), Expect = 7.91e-47
Identity = 82/97 (84.54%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
          MC+SATQS+LFH IQ+SKN+R SKRSK QVLRLT RRRCEEKLGK+IELKNLQLYL+NQT
Sbjct: 1  MCISATQSILFHQIQTSKNRRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97
          II+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of IVF0012735 vs. NCBI nr
Match: KAG6579456.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016928.1 Protein LITTLE ZIPPER 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154 bits (389), Expect = 1.60e-46
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
          MC+ ATQS+LFH IQ+SKNKR SKRSK QVLRLT RRRCEEKLGK+IELKNLQLYL+NQT
Sbjct: 1  MCIRATQSILFHQIQTSKNKRRSKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLKNQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97
          II+EN+KLREKANILHQEN+AL+TEFQKKFPHL QRK
Sbjct: 61 IIKENDKLREKANILHQENIALMTEFQKKFPHLNQRK 96

[Close]

BLAST of IVF0012735 vs. NCBI nr
Match: XP_023534553.1 (protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141 bits (356), Expect = 1.77e-41
Identity = 75/97 (77.32%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 1  MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
          MC++ATQ +LFH I +SKN+R  KRSK QV RL+ RR  EEK GK+IELKNLQLYLENQT
Sbjct: 1  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSRRRSFEEKQGKDIELKNLQLYLENQT 60

Query: 61 IIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97
          IIEENEKLREKANILHQENLAL+TEF KKFPH +QRK
Sbjct: 61 IIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK 97

[Close]

BLAST of IVF0012735 vs. NCBI nr
Match: KAG7036101.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 141 bits (356), Expect = 1.82e-41
Identity = 77/98 (78.57%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRC-EEKLGKEIELKNLQLYLENQ 60
          MC++ATQ +LFH I +SKN+R  KRSK QV RL+SRRR  EEK GK+IELKNLQLYLENQ
Sbjct: 1  MCITATQRILFHQIHTSKNRRRLKRSKLQVQRLSSRRRSFEEKQGKDIELKNLQLYLENQ 60

Query: 61 TIIEENEKLREKANILHQENLALLTEFQKKFPHLEQRK 97
          TIIEENEKLREKANILHQENLAL+TEF KKFPH +QRK
Sbjct: 61 TIIEENEKLREKANILHQENLALMTEFHKKFPHFDQRK 98

[Close]

BLAST of IVF0012735 vs. TAIR 10
Match: AT3G60890.2 (protein binding )

HSP 1 Score: 58.5 bits (140), Expect = 3.4e-09
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 21 RSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQTIIEENEKLREKANILHQENL 80
          +S  ++  ++L LTSRRR   K  KE+E++NL+L++ENQ+II ENE L++KA +LH EN 
Sbjct: 28 KSKTQTHLRILNLTSRRRRLLKEQKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENN 87

Query: 81 ALLTEFQKKF 91
          AL      K+
Sbjct: 88 ALFALLHPKY 97

[Close]

BLAST of IVF0012735 vs. TAIR 10
Match: AT3G60890.1 (protein binding )

HSP 1 Score: 53.9 bits (128), Expect = 8.3e-08
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 21 RSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQTIIEENEKLREKANILHQENL 80
          +S  ++  ++L LT RRR   K  KE+E++NL+L++ENQ+II ENE L++KA +LH EN 
Sbjct: 28 KSKTQTHLRILNLTRRRRL-LKEQKEMEMRNLKLFVENQSIIRENEALKKKALLLHHENN 87

Query: 81 ALLTEFQKKF 91
          AL      K+
Sbjct: 88 ALFALLHPKY 96

[Close]

BLAST of IVF0012735 vs. TAIR 10
Match: AT2G45450.1 (protein binding )

HSP 1 Score: 50.4 bits (119), Expect = 9.2e-07
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 1   MCVSATQSVLFHTIQSSKNKRSSKRSKFQVLRLTSRRRCEEKLGKEIELKNLQLYLENQT 60
           MC+S++++  F    +        +S  ++ RL+ RRR   +  K++E+ NL+LY+ENQ 
Sbjct: 44  MCLSSSET--FSDTPTRLVLYLKTQSHVRIPRLSRRRRMWRE-EKKMEMINLKLYVENQN 103

Query: 61  IIEENEKLREKANILHQENLALLTEFQKK 90
           II ENEKL++KA +LHQEN  L +  Q K
Sbjct: 104 IIRENEKLKKKALLLHQENKTLFSLLQTK 129

The following BLAST results are available for this feature:

BLAST of IVF0012735 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZX5	1.2e-06	45.71	Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1	[more]
F4IG60	1.3e-05	40.45	Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1	[more]

BLAST of IVF0012735 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKF8	3.2e-39	95.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1	[more]
A0A6J1E3C5	6.2e-35	84.54	protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 ...	[more]
A0A6J1DZF5	1.3e-29	78.13	protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1E319	2.5e-28	75.79	protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6P9E725	7.8e-22	63.44	protein LITTLE ZIPPER 1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC10901061...	[more]

BLAST of IVF0012735 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647881.1	6.72e-55	96.91	hypothetical protein Csa_000025 [Cucumis sativus]	[more]
XP_022922429.1	7.91e-47	84.54	protein LITTLE ZIPPER 1-like [Cucurbita moschata]	[more]
KAG6579456.1	1.60e-46	84.54	Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG701...	[more]
XP_023534553.1	1.77e-41	77.32	protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]	[more]
KAG7036101.1	1.82e-41	78.57	Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of IVF0012735 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60890.2	3.4e-09	47.14	protein binding	[more]
AT3G60890.1	8.3e-08	45.71	protein binding	[more]
AT2G45450.1	9.2e-07	40.45	protein binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 58..85
None	No IPR available	PANTHER	PTHR33601:SF21	OS09G0520500 PROTEIN	coord: 1..94
IPR039312	Protein LITTLE ZIPPER	PANTHER	PTHR33601	PROTEIN LITTLE ZIPPER 4	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0012735.1	IVF0012735.1	mRNA