IVF0012061 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGTTTAATTAATATTTTTTTGTTTTGTTAATTATAATTAACTAGCATTCATTCATTCATTAATTTTTCTTTCTTTGAACCTCTTCCTTTTTTCCATTTCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAAACCATTTCTCTCCTAATGTTCTTTTGATTTTTCCCTATGGCTTCTTTCCACCTTCTTTTCCCGCTTTTCCCCCTCCATTTAGGGTTTCGTTTCAACAGGTAATACTTTTTTTTTTTTTAAATATATATATATATTTTATATATATACTTATACCTAATTAATTAAGTTTTTTTTTGTGGCTCAGTTTTGAAGAACCTCTCCTCAAGGCTTGGATTTGAATTCCAACACAATCATCTTCCCCAAAAGCAAAGTTCAACAAAATCTCACAATTTCTTCATTTTTCAATCCAAAAGAGAAAAAAGAAAAAGAAGAAATGTCTAATAATAAAATGAAAGGCCTTCTGAAAGGCCTCAGATACATTTCTCAAATATTCGGTATGCTAAATCATATTATCCAACAACAACCCTTCTTTTTCTATAACAAAACTAAAATCAAAATTAAACTTTAAAGAATTTTGTTTTTTTTTTTTTGAATACTTGGATGCAGATAATGAGAAAGAACCTGAAATGCAGATTGGGTTTCCAACAGATGTGAAACATGTTGCTCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGGTATATATAATAATATGGAAAAATTATACTAATATATCTTCTTTCTTTTCTTTTTAATTTCCATGCATTTTAATCCCCCCCAAAAAAAGGGCCTAAATTTAAAATAAAATAAAAGGTTTTTAATTTCTTATGAGGAATTGAATGCAGATGAATGAATTCAAACATCCAAACAATGGAGATATCCAACAAGATTCCTCTGCTCAATGGGCTTCTCAAGGTATCATTTACTTCTTTTTTATATCATCTTAATATATTTTATAATTTTGATTTTACTCAGCTTTTTTTTTTTTTAATTCCTAATTTTGTATTAGATACAATAATAGGATGGAGCACTCCCTCAAAATTTATTAGAGATTTAAACTTTATAAATGAAGGCAAAATGCACTTTGTTTGAGAAATGGTTATAAAGTGGTCTTTAAAGCTAATCAAATTGACTAATGGTTGAGTGATGTTTTTCCTCGGTGATTTGGAAATTCTATTAATTTAATACTATCTTTTTAAATCACGTGGGTTCATTCTTTCCCTCTTCACACCATTATCTTCTTCAACCCTCATCTGTCAAACACCACCATCGTTGCCTCAAACATATTTGTAAACAAGCTCCTGGGTCCAACAATTTCGCTCTTTGCTTCAATCTTTTCTCTCCTGATCTAATTCTGTTTAAGGACATAATTAAAGAGGAAGGTGTGAAGTTTGCAGGGGTTTCTATTTGTTAAGCCGTTCTCTATAGCATATAAAAAAGAAGAAGGTAAAAGGACACCAACTTCAAGTCGAAAGCGATATATGTTGTACCCTCAAATCTCTCAAAAACTCAGACCTATACAATATGACCTTACATTCTGACCCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTACTTTTGCCTATCTCTCTCACCCTCTTTAATTTCTTCACTGTCGGCTCGGCTAGTGTTGAGTTTAATTAAAACAAAACCTACATGGATTCGGATGGGAAAGGAACAGAGATAAACAAGAATCAGTCATGAATCTAATCCAATCCCAATCAAAGGTATAGTAATCTTGTTCGTGGAATAGATAGATCTAGTAATGGGAAAAAAATGGAAATGGGTTTGTGCAAATTAGTCAACCAACGGTCTAATTAGCTTGGATGAACTATTTTTTGAACTTCAAGGACATAATTATTTGGTTTGAAACTATAGGACTAAAATTAAATAGACATCATGTATAGACGTTATGGATCAAAAGTACACTTTACCCCATGGATTAACTACATTTTTTAAGTTTATTCAGTATTAGAAAAATGCTAACACCTATTTTATACAATTGAAAGAAATTCTTTTTAAGAATAATAATAAAAAAAAAAAATTTACTACACTTTTGTGAGATGAAGTAATTAAAATATTTTATCCACCTTGTCATTTTTACGATCCTGCTGATGTAAAATTGTAAAGCTATTCTCTTCGTATTTTGTACTTTCATTTGTATGTTTATTGAGTATAATTGTTTAGACAAATTTCAAAACAAACAAACTCTTAAAAACACGGAGGTATGGAGGAGAAATTAATTATGAGTATGAAATTGGAATAGATTCAACAAGAGACATGGCAGTTACAAGTCGGGACTTGCCGGAGCTACCAAAATCATCGAGACGGCAGTCGTCGACCCTCGGGGGAACCGTGGCGGAGTCTCCGACGATGAGAGATAAATCGGAGAAGGCAAAGTCAAAGAAGTCTTCAAAGGCCAAGGAATCTTCTTCATCGGATATCATGGGACCCTCGCGCCGGAATTCCGATCTGAACCAAGGCTGTGAATCGACGACGGAAAGCCTCCCCGGAGTTCCGAAGAAAGCGCGGCGGAAGAAATCAAAGGAGGAAGGATCAACGAGATCGAGATCCAAAGCCACGGCGGCGGAGAGTTGCTCGTCTCAGTTCTCCAATAACGGATCGGACGTGGGATCCATCTCCAGATCCAACGACGATGACTTGTTGACCGGAGACGGGGTTTTACATGAAAATTAATTAATAAAATATTTGCTTTTGGGGGGG AAGAGTTTAATTAATATTTTTTTGTTTTGTTAATTATAATTAACTAGCATTCATTCATTCATTAATTTTTCTTTCTTTGAACCTCTTCCTTTTTTCCATTTCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAAACCATTTCTCTCCTAATGTTCTTTTGATTTTTCCCTATGGCTTCTTTCCACCTTCTTTTCCCGCTTTTCCCCCTCCATTTAGGGTTTCGTTTCAACAGTTTTGAAGAACCTCTCCTCAAGGCTTGGATTTGAATTCCAACACAATCATCTTCCCCAAAAGCAAAGTTCAACAAAATCTCACAATTTCTTCATTTTTCAATCCAAAAGAGAAAAAAGAAAAAGAAGAAATGTCTAATAATAAAATGAAAGGCCTTCTGAAAGGCCTCAGATACATTTCTCAAATATTCGATAATGAGAAAGAACCTGAAATGCAGATTGGGTTTCCAACAGATGTGAAACATGTTGCTCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGATGAATGAATTCAAACATCCAAACAATGGAGATATCCAACAAGATTCCTCTGCTCAATGGGCTTCTCAAGATTCAACAAGAGACATGGCAGTTACAAGTCGGGACTTGCCGGAGCTACCAAAATCATCGAGACGGCAGTCGTCGACCCTCGGGGGAACCGTGGCGGAGTCTCCGACGATGAGAGATAAATCGGAGAAGGCAAAGTCAAAGAAGTCTTCAAAGGCCAAGGAATCTTCTTCATCGGATATCATGGGACCCTCGCGCCGGAATTCCGATCTGAACCAAGGCTGTGAATCGACGACGGAAAGCCTCCCCGGAGTTCCGAAGAAAGCGCGGCGGAAGAAATCAAAGGAGGAAGGATCAACGAGATCGAGATCCAAAGCCACGGCGGCGGAGAGTTGCTCGTCTCAGTTCTCCAATAACGGATCGGACGTGGGATCCATCTCCAGATCCAACGACGATGACTTGTTGACCGGAGACGGGGTTTTACATGAAAATTAATTAATAAAATATTTGCTTTTGGGGGGG ATGTCTAATAATAAAATGAAAGGCCTTCTGAAAGGCCTCAGATACATTTCTCAAATATTCGATAATGAGAAAGAACCTGAAATGCAGATTGGGTTTCCAACAGATGTGAAACATGTTGCTCATATTGGATGGGATGGTCCTTCAGTCAATTCTCCAAGCTGGATGAATGAATTCAAACATCCAAACAATGGAGATATCCAACAAGATTCCTCTGCTCAATGGGCTTCTCAAGATTCAACAAGAGACATGGCAGTTACAAGTCGGGACTTGCCGGAGCTACCAAAATCATCGAGACGGCAGTCGTCGACCCTCGGGGGAACCGTGGCGGAGTCTCCGACGATGAGAGATAAATCGGAGAAGGCAAAGTCAAAGAAGTCTTCAAAGGCCAAGGAATCTTCTTCATCGGATATCATGGGACCCTCGCGCCGGAATTCCGATCTGAACCAAGGCTGTGAATCGACGACGGAAAGCCTCCCCGGAGTTCCGAAGAAAGCGCGGCGGAAGAAATCAAAGGAGGAAGGATCAACGAGATCGAGATCCAAAGCCACGGCGGCGGAGAGTTGCTCGTCTCAGTTCTCCAATAACGGATCGGACGTGGGATCCATCTCCAGATCCAACGACGATGACTTGTTGACCGGAGACGGGGTTTTACATGAAAATTAA MSNNKMKGLLKGLRYISQIFDNEKEPEMQIGFPTDVKHVAHIGWDGPSVNSPSWMNEFKHPNNGDIQQDSSAQWASQDSTRDMAVTSRDLPELPKSSRRQSSTLGGTVAESPTMRDKSEKAKSKKSSKAKESSSSDIMGPSRRNSDLNQGCESTTESLPGVPKKARRKKSKEEGSTRSRSKATAAESCSSQFSNNGSDVGSISRSNDDDLLTGDGVLHEN Homology
BLAST of IVF0012061 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.2e-28 Identity = 105/222 (47.30%), Postives = 134/222 (60.36%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy Swiss-Prot
Match: Q1PF35 (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.1e-27 Identity = 94/210 (44.76%), Postives = 120/210 (57.14%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy Swiss-Prot
Match: F4J424 (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana OX=3702 GN=RIC5 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19 Identity = 65/167 (38.92%), Postives = 95/167 (56.89%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 6.1e-19 Identity = 64/162 (39.51%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy Swiss-Prot
Match: Q9ZWB8 (CRIB domain-containing protein RIC8 OS=Arabidopsis thaliana OX=3702 GN=RIC8 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.3e-18 Identity = 84/194 (43.30%), Postives = 109/194 (56.19%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy TrEMBL
Match: A0A1S3BHX9 (CRIB domain-containing protein RIC6-like OS=Cucumis melo OX=3656 GN=LOC103490063 PE=4 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103 Identity = 216/262 (82.44%), Postives = 216/262 (82.44%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy TrEMBL
Match: A0A0A0L7D1 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G374200 PE=4 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.1e-99 Identity = 197/216 (91.20%), Postives = 207/216 (95.83%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy TrEMBL
Match: A0A6J1DMX0 (CRIB domain-containing protein RIC7 OS=Momordica charantia OX=3673 GN=LOC111022701 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 5.4e-71 Identity = 164/223 (73.54%), Postives = 184/223 (82.51%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy TrEMBL
Match: A0A6J1HR56 (CRIB domain-containing protein RIC7-like OS=Cucurbita maxima OX=3661 GN=LOC111467023 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 3.0e-69 Identity = 156/221 (70.59%), Postives = 184/221 (83.26%), Query Frame = 0
BLAST of IVF0012061 vs. ExPASy TrEMBL
Match: A0A6J1HJD0 (CRIB domain-containing protein RIC7-like OS=Cucurbita moschata OX=3662 GN=LOC111464092 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 1.3e-67 Identity = 156/221 (70.59%), Postives = 181/221 (81.90%), Query Frame = 0
BLAST of IVF0012061 vs. NCBI nr
Match: XP_008447656.1 (PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo]) HSP 1 Score: 387 bits (993), Expect = 6.15e-134 Identity = 216/263 (82.13%), Postives = 216/263 (82.13%), Query Frame = 0
BLAST of IVF0012061 vs. NCBI nr
Match: KGN57890.1 (hypothetical protein Csa_011162 [Cucumis sativus]) HSP 1 Score: 373 bits (958), Expect = 2.59e-129 Identity = 197/217 (90.78%), Postives = 207/217 (95.39%), Query Frame = 0
BLAST of IVF0012061 vs. NCBI nr
Match: XP_031737542.1 (CRIB domain-containing protein RIC6 [Cucumis sativus]) HSP 1 Score: 367 bits (941), Expect = 1.24e-126 Identity = 197/223 (88.34%), Postives = 207/223 (92.83%), Query Frame = 0
BLAST of IVF0012061 vs. NCBI nr
Match: XP_038888498.1 (CRIB domain-containing protein RIC7-like [Benincasa hispida] >XP_038888499.1 CRIB domain-containing protein RIC7-like [Benincasa hispida]) HSP 1 Score: 330 bits (846), Expect = 3.30e-112 Identity = 184/224 (82.14%), Postives = 197/224 (87.95%), Query Frame = 0
BLAST of IVF0012061 vs. NCBI nr
Match: XP_022155608.1 (CRIB domain-containing protein RIC7 [Momordica charantia] >XP_022155609.1 CRIB domain-containing protein RIC7 [Momordica charantia] >XP_022155610.1 CRIB domain-containing protein RIC7 [Momordica charantia]) HSP 1 Score: 279 bits (713), Expect = 4.51e-92 Identity = 164/224 (73.21%), Postives = 184/224 (82.14%), Query Frame = 0
BLAST of IVF0012061 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29 Identity = 105/222 (47.30%), Postives = 134/222 (60.36%), Query Frame = 0
BLAST of IVF0012061 vs. TAIR 10
Match: AT2G20430.1 (ROP-interactive CRIB motif-containing protein 6 ) HSP 1 Score: 124.0 bits (310), Expect = 1.5e-28 Identity = 94/210 (44.76%), Postives = 120/210 (57.14%), Query Frame = 0
BLAST of IVF0012061 vs. TAIR 10
Match: AT3G23380.1 (ROP-interactive CRIB motif-containing protein 5 ) HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20 Identity = 65/167 (38.92%), Postives = 95/167 (56.89%), Query Frame = 0
BLAST of IVF0012061 vs. TAIR 10
Match: AT2G33460.1 (ROP-interactive CRIB motif-containing protein 1 ) HSP 1 Score: 95.9 bits (237), Expect = 4.3e-20 Identity = 64/162 (39.51%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of IVF0012061 vs. TAIR 10
Match: AT1G03982.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19 Identity = 84/194 (43.30%), Postives = 109/194 (56.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|