IVF0011513 (gene) Melon (IVF77) v1

Overview
NameIVF0011513
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTwinkle-like protein, chloroplastic/mitochondrial
Locationchr11: 19322822 .. 19328301 (+)
RNA-Seq ExpressionIVF0011513
SyntenyIVF0011513
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTTTCAATATTACCAATTTAGCCCACCTTTCATTTTCCCCTTACCCAAGTTGACACTCCCATCTTTCGTCTTCTTACTCTTCTCCGGTTTTCCATTTTCCATCTTTCGTCCATACATACGCAACACCATGTCTAAATCTTTCTCTCTCACCATTCTTCTCCTCTACCATTCCATTTGAGCAATTCCGCTGTCTGAGATCATTCGTTTTTGGAGTAACTCTAAATTTTGTGAGTCCTCTGTGGCTTGTGGTGGCAGCCACCCTTTCTTCGCCTTCCCCTTCTCTCGGTAGCTTTTTCTACGAGGAAGAGGAATCGAAAGATTCAAGCAATGTATTATCTTAATCTTTACCATTTTAATCTGTCTTCTTTTTTGCTGAAGGAGCTTCCGCTTTCGGTTTCTTAACCACTTGTCTTGTCTTTGGCGAGTTTTCTATAATTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTTCTGTTCTGGTGTTGAAATCTTGTGATTTCTTCCTCTCACTGGTGAATTTTTTTGTGATTGCAGCATGGGCATCAACGGATTAGAGTTTATGATTCCACCATTCTTTGCGGGTACAGGGTAAAAAGAGCAATTATTAATATATAGTAGAGGATCTTAATTAATCCCAATCTTAATTATTTTCTCAAATTATATATATCTATGTGCAAGTAATAATGAAATACACATTATAGTGAATATTGATTATTGATTGTAACGAACTAAACAGAGTAAGAGTAGCAAATGAGCTGGGAGGCGGCAATGGAAAAGGAGCCAAGTTTGCAGCCATTGTGTCATCAACAACATCATTAGTAATTGGCATTCTCTTTTGTTGTTTAATTGTAATATCTAACGACAAATTTGGTCTTCTTTTTTCCTCTACCGACATTGTTATTCAAGAAGTCAATAAACTTAGTATCCTCTTGGCCTTCACTATCCTCTTCAACAATGTCCAGCCAGTCCTCTCCGGTATGACAATTTTACTATAATGTACTAATTTGTATTTCAAAATTAACTATCTTTTCATAAATATTTAATTTGCTGTGATCTAAATATATAGGAGCGGCGGTTGGAACAGGTTGGCAGTCTTATTTAACTTGTATAAATTTGGGTTGCTATTATTTCATTGGTTTGCCTCTTGGCATTTTCTGAGACTGAGACTAATTAGTTTTAGCAATTCACCATTTGAGATGCAAAATTTCACTCTCATTCCTCACTGTTCTTTTTCATTCCATAGCATATCAATCAATACAATGGATGAAGCAAGTATTCTTTTTATATGCACTGCCAGTATTCTTTTTCATCTCAAAAGAGTGACTTAGTAAAGAGTTATTTTAAACATTATCGCTTAACTTAACTTCCAAAGTTTTCTTTTCTACTTAAAGTTCTATTAAGATCCTTTCTAGCTCTTTCTCAACGTCTTGGATTAGTTTATAATCCATGAGAATTCCCTCATTGTAGTTTGAGACTGATTAAAAGTGTTTGAATTGAGTTTTAAGGCTATTTTTGCAGGCACGACCATACTCGACCAAGATTTGTTCTATAAGTTTAGGGTACTAAGGCTAATGCTATTTTGAAGGTAAGAACCTGTTCATTGGGCATTTTTGTAGTTTGATTAAGGTTTTCCAACTAGTATTGCCTCTTAAACTTTGTTCTTATTGTTTAGGTTTTTAGGAGCACAATGAGTAGAATTCTAAGCATACAATGGGTAGCTGTTTTTTTTTTGTTGATATTGATTTCATGGGCTGAGTAATGATTTTTGAGATTTGAATTACAACATCCTTGTGGGTTTTTGTTATTGTTTTGCTTTGTTTTAGCTGTTGGTTTATTTGACTAGTGGTTTGCATGAGATTTTGTGATCATGAGGGCTGAATCATAAAGAGAGAATTTTGCTTCATTGTACTTCGTATTAGTGAAACATTTTGATAAGCTTTCTGAATTAATTTGAAGTATTTTTCAATGGGTTTCATTTTCACTGTTTGTGATTCTAAGGTACAAAAAGGGGACTTCCTATTTGTAGAAAGTTTGTATGTTGTGTTTTGATTCATGTTAATTTTATTGTTTATAGTTTGAAAGAAATAATGTTTTGCCATTTAAATTATCGATTACTAAGGACTAAAATGTGTTTCTCCGTATTTTGCTTTTTGATTTTCTGATGTGCAGTCTTCATCTGTATGACCAACATTGTGGGCTGATACATTATGTAATTAAGTTTTCCTTTTTTGGGTTATTTTGCAGGATTCTGAAAGTGAGAACAAAAAGAATGCTCGTGATTATTCTGACTAGGTGTGAAAATGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTCGATTGGTAATTGACCCTTATAGTGAGCTTGACCATCAACGGCTTCCAAATCAGTGAGTTTTATCATTATGTTAGTTCTTTGAAGATGGAGTAACCCATGATATCTCCAGTAGTTTTCAACCACTGTGACTGATGGCTATGGTTTCTTTGATCTCAGTGATAATTTTTTTATTTTCCTGTTATTTATTTGTTCAATTTTTGGGTTGTGATGATCCCTTGTATTCCTGAAAAGATTTTGCATCCCTTGGGTGCTAGAATTGTATCATGTTTGATCAATAGGAGCAGGAATGGGTCTTTAAAATTCACCCAGATATTTTAATGGACAATGGGGCTTGGTTTTTTTTTTCTTTTTTCGGTTAATGAGTTTTTTTTCTAGTCTTATGGGCTTGGGTTTTTTTTTCTTTGTTCTGTTAATGAGTTTAAAGCTCCCATTGTTGTCTATTTATACTGATGTGGGATTTCATGTCATGGGGTTAGCGGTTCATTTTTTTGCAAGTTGGAATATCTGAATCTCTCCCTGGTTTTCCTTTTCCTTTGTGATTGAATAACAGCAGAAAGGAATATAACTTTCAGGACATTCCCTTTTGAACCCAAAACACGATTTTTTTTTATTTAGGAAAAACACAATAACACTATGATTGATGTGCTAACAACGATCAATAGGTTCATTTCAACTGTTTTCTCTCTTCAACTACTACGCTAACATGGCACATCACTGCAGGCATTGTATTCTTGCAGTCTGGTTGGTATAAACTTCACAGAACTTTCTCTAGAGAAGAAAGTAGATTAACCTTCTTATTTCAGCAAATAGTTGAACGTTTGATTATGTGCTTTTGCATCTTGTTTTTCTCTAATTTCAGAAAATGTATCTAACACATTTGTCAACAGTTTTTGGTAATTTTTGGTATAACTAGTTTTTCCAACTTGTGGTTTCATGTTCCTGGAAAATGAAGGGTCTCAAAAGCTATGCTTTTTTGTTTCTTGTGTTTGATGCATCACTTAGGTACCTAGATTAGCTGGGTATGACAGCCAAGTACAAAACAAAGGTCTAAAATGCAATAATCTTTGTTGGTTTAGAGAAGTTTGAGATTTACGACTCTTCATTGTGTAATTCTTTCGGTTGTTGTGAATTTGTTTGATCACTCAATTGGTTTATTCTTTATTTCATACTTCATTGTGTTTTTTCTTATGGTAAAAAGTCTGATCTGTTGTTTATGAAGTTTGAATTTAGGATTATTGTTTGAGGTTAGAATATTTACAAGGACTAAAATGGTTTTTAGTTGAAGTTTAAAGACTTTTTCTGTTTATTGAGAACATCATTTAAATTTTTTGATATTGACAGGTTTTGTTGATGGTTTGGAGATGGGAAATAACACAAAGGTACAAAATTAGTTCTAAATAAATTTAAAAGGTAACTTACATAGTTACAACAAGGTTGGTTAGGAACCCAAAAGCTTTGATGTTGGATGAGATTATCAACTATGTGCAGTCATTACAACACCAAGTTGAGGTAATTATATTTTAGAATAAAATTAGGAAAAAAAATGTGGTCCACATTGCCGTTTCAAATTATATTTTTGCCTTTAAGACATGGCTAGAAAAGTAGATCGCCAACCTGACATAAAACTTAGACGTGAGAAGTAGATAACAAAGTAAGAAATTCATTGCTGGAAAATGGTGTTTATAGGCTTAATTTTCAAAATCTAAAAATACACAAATCATTAAAGGAGCTTTGGTTTTACTATTTTTTTCCTTGGAACAAAAATGCACTACCTATATGCAGCTATGCGAATATTGGCGTGTTTAAAATGTAGTGGCTTGCACAGAAGCCTTGGAACACATATATCAAAGGTAATGCTCACCTTTCCGAAGATGAAGATTATGGTTTGCATTTCTTTAAATGTGTCACCGGAATAAAAGTTATTTTATGTAATTTTCTAGTTATGCTAAAGCTAAGGTTGGTCAATGATGTTGTTTGAATATTCCTAAAGAAAGAGAACGCTAGAAGGTTTTACTTCCTTTCTCGTATTAGAAAACTATGCTTGAACTTAGAGTAACCTTTTTGGTTATGTGCTGTGAGGGCTAAATAAAAGTTGTAGTTCTAAGGACATTGTTGGTTTTGGTTTAGGTTTTGTCAATAACATTGGATGAATGGTCTGACGATGAGATTGATGCAATGAATGATAGATTTTTTCCATAATTATCTTAAGCTTTATATTTTTAATATAGCTTCGTTTTTACTCTGGTCATATATTCTAGTTTGGTATTCGATTGAATTGAAGAATTGGTATTGATTTTTTGTTCTTTAGATAGTTTAGTTTTGATCTAATATTGAGTGGTTAAATTCAAATAGAAAGTGTATAATTCAAAAATACTATACGTGTTGCATAGAACACTAGCATACAGCAAATTCACTATTATTTTTAATAGAGTGTTATTGACTTATCAACGTACTGACAATTAATGTGAAACCTTTGAGTTTCTTGTTGTTTAGGATACTAGTCGAGTCATCCATGGATTGGATTGTCGGTTGCTTGTTCTGAATCCTGGCCTGACGTTATGATTTTGTTTTTGTTTATCATTTATATGCGGCTTGATGGTGAAAACTAATAGAATCCTTGACTCACGGATGTAGTTGAAATCTCTCCTATAGACATGTTTGCTTGATTGTTGTTGAAATCTCCTATGAACAAGAGTCCCCAAGGGGATTCATTACTCAACACCCTATGAACAATATATTATTTATAGATAAAACACCCATAACAACAAAATTATTCACAATCTTAATCGAACTTATGAAATTCTATCTAACATAATAAATGTATAAAACTGTGATTCTCAGAAAGGAGGTGGAGATTCCAGACAATTACCCAAAATTTCCAACTTAGAGGAGAGTTTGGGTGGAAGATTTACTGAGATAACGGGCGAAAGGTTGAAGAAAATGTTGGAGGAGATGGAAGAAGAGGAATTCTGCATCATTACAAAATGTATAATATTAAATTAATAAAAATTGTCAACTCACCGTTTAATATCCACGTCATTTTACTGTTAGTTAAGTAACCTTAAGGATCATTCGTTTTCAAGGACTCAAGTGTTCATTTTGAAATCTAG

mRNA sequence

CTTTTTTTCAATATTACCAATTTAGCCCACCTTTCATTTTCCCCTTACCCAAGTTGACACTCCCATCTTTCGTCTTCTTACTCTTCTCCGGTTTTCCATTTTCCATCTTTCGTCCATACATACGCAACACCATGTCTAAATCTTTCTCTCTCACCATTCTTCTCCTCTACCATTCCATTTGAGCAATTCCGCTGTCTGAGATCATTCGTTTTTGGAGTAACTCTAAATTTTGTGAGTCCTCTGTGGCTTGTGGTGGCAGCCACCCTTTCTTCGCCTTCCCCTTCTCTCGGTAGCTTTTTCTACGAGGAAGAGGAATCGAAAGATTCAAGCAATGTATTATCTTAATCTTTACCATTTTAATCTGTCTTCTTTTTTGCTGAAGGAGCTTCCGCTTTCGGTTTCTTAACCACTTGTCTTGTCTTTGCATGGGCATCAACGGATTAGAGTTTATGATTCCACCATTCTTTGCGGGTACAGGGTAAAAAGAGCAATTATTAATATATAGTAGAGGATCTTAATTAATCCCAATCTTAATTATTTTCTCAAATTATATATATCTATGTGCAAGTAATAATGAAATACACATTATAGTGAATATTGATTATTGATTGTAACGAACTAAACAGAGTAAGAGTAGCAAATGAGCTGGGAGGCGGCAATGGAAAAGGAGCCAAGTTTGCAGCCATTGTGTCATCAACAACATCATTAGTAATTGGCATTCTCTTTTGTTGTTTAATTGTAATATCTAACGACAAATTTGGTCTTCTTTTTTCCTCTACCGACATTGTTATTCAAGAAGTCAATAAACTTAGTATCCTCTTGGCCTTCACTATCCTCTTCAACAATGTCCAGCCAGTCCTCTCCGGTATGACAATTTTACTATAATGTACTAATTTGTATTTCAAAATTAACTATCTTTTCATAAATATTTAATTTGCTGTGATCTAAATATATAGGAGCGGCGGTTGGAACAGGTTGGCAGTCTTATTTAACTTGTATAAATTTGGGTTGCTATTATTTCATTGGTTTGCCTCTTGGCATTTTCTGAGACTGAGACTAATTAGTTTTAGCAATTCACCATTTGAGATGCAAAATTTCACTCTCATTCCTCACTGTTCTTTTTCATTCCATAGCATATCAATCAATACAATGGATGAAGCAAGTATTCTTTTTATATGCACTGCCAGTATTCTTTTTCATCTCAAAAGAGTGACTTAGTAAAGAGTTATTTTAAACATTATCGCTTAACTTAACTTCCAAAGTTTTCTTTTCTACTTAAAGTTCTATTAAGATCCTTTCTAGCTCTTTCTCAACGTCTTGGATTAGTTTATAATCCATGAGAATTCCCTCATTGTAGTTTGAGACTGATTAAAAGTGTTTGAATTGAGTTTTAAGGCTATTTTTGCAGGCACGACCATACTCGACCAAGATTTGTTCTATAAGTTTAGGGTACTAAGGCTAATGCTATTTTGAAGGATTCTGAAAGTGAGAACAAAAAGAATGCTCGTGATTATTCTGACTAGGTGTGAAAATGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTCGATTGGTAATTGACCCTTATAGTGAGCTTGACCATCAACGGCTTCCAAATCAGTTTTGTTGATGGTTTGGAGATGGGAAATAACACAAAGGTACAAAATTAGTTCTAAATAAATTTAAAAGGTAACTTACATAGTTACAACAAGGTTGGTTAGGAACCCAAAAGCTTTGATGTTGGATGAGATTATCAACTATGTGCAGTCATTACAACACCAAGTTGAGGTAATTATATTTTAGAATAAAATTAGGAAAAAAAATGTGGTCCACATTGCCGTTTCAAATTATATTTTTGCCTTTAAGACATGGCTAGAAAAGTAGATCGCCAACCTGACATAAAACTTAGACGTGAGAAGTAGATAACAAAGTAAGAAATTCATTGCTGGAAAATGGTGTTTATAGGCTTAATTTTCAAAATCTAAAAATACACAAATCATTAAAGGAGCTTTGGTTTTACTATTTTTTTCCTTGGAACAAAAATGCACTACCTATATGCAGCTATGCGAATATTGGCGTGTTTAAAATGTAGTGGCTTGCACAGAAGCCTTGGAACACATATATCAAAGGTAATGCTCACCTTTCCGAAGATGAAGATTATGGTTTGCATTTCTTTAAATGTGTCACCGGAATAAAAGTTATTTTATGTAATTTTCTAGTTATGCTAAAGCTAAGGTTGGTCAATGATGTTGTTTGAATATTCCTAAAGAAAGAGAACGCTAGAAGGTTTTACTTCCTTTCTCGTATTAGAAAACTATGCTTGAACTTAGAGTAACCTTTTTGGTTATGTGCTGTGAGGGCTAAATAAAAGTTGTAGTTCTAAGGACATTGTTGGTTTTGGTTTAGGTTTTGTCAATAACATTGGATGAATGGTCTGACGATGAGATTGATGCAATGAATGATAGATTTTTTCCATAATTATCTTAAGCTTTATATTTTTAATATAGCTTCGTTTTTACTCTGGTCATATATTCTAGTTTGGTATTCGATTGAATTGAAGAATTGGTATTGATTTTTTGTTCTTTAGATAGTTTAGTTTTGATCTAATATTGAGTGGTTAAATTCAAATAGAAAGTGTATAATTCAAAAATACTATACGTGTTGCATAGAACACTAGCATACAGCAAATTCACTATTATTTTTAATAGAGTGTTATTGACTTATCAACGTACTGACAATTAATGTGAAACCTTTGAGTTTCTTGTTGTTTAGGATACTAGTCGAGTCATCCATGGATTGGATTGTCGGTTGCTTGTTCTGAATCCTGGCCTGACGTTATGATTTTGTTTTTGTTTATCATTTATATGCGGCTTGATGGTGAAAACTAATAGAATCCTTGACTCACGGATGTAGTTGAAATCTCTCCTATAGACATGTTTGCTTGATTGTTGTTGAAATCTCCTATGAACAAGAGTCCCCAAGGGGATTCATTACTCAACACCCTATGAACAATATATTATTTATAGATAAAACACCCATAACAACAAAATTATTCACAATCTTAATCGAACTTATGAAATTCTATCTAACATAATAAATGTATAAAACTGTGATTCTCAGAAAGGAGGTGGAGATTCCAGACAATTACCCAAAATTTCCAACTTAGAGGAGAGTTTGGGTGGAAGATTTACTGAGATAACGGGCGAAAGGTTGAAGAAAATGTTGGAGGAGATGGAAGAAGAGGAATTCTGCATCATTACAAAATGTATAATATTAAATTAATAAAAATTGTCAACTCACCGTTTAATATCCACGTCATTTTACTGTTAGTTAAGTAACCTTAAGGATCATTCGTTTTCAAGGACTCAAGTGTTCATTTTGAAATCTAG

Coding sequence (CDS)

ATGCTCGTGATTATTCTGACTAGGTGTGAAAATGATTCCCTCCCAAGTATTAGTTGGGTCTTGGATCTTGCAAAAGCAGCAGTTTTAAGGCATGGAGTTCGATTGGTAATTGACCCTTATAGTGAGCTTGACCATCAACGGCTTCCAAATCAGTTTTGTTGA

Protein sequence

MLVIILTRCENDSLPSISWVLDLAKAAVLRHGVRLVIDPYSELDHQRLPNQFC
Homology
[Close]
BLAST of IVF0011513 vs. ExPASy Swiss-Prot
Match: B5X582 (Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g30680 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.5e-13
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 8   RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 52
           RCE DSLPSI WVL+ AKAAVLR+G+R LVIDPY+ELDHQR P Q
Sbjct: 542 RCEMDSLPSIDWVLERAKAAVLRYGIRGLVIDPYNELDHQRTPRQ 586

[Close]
BLAST of IVF0011513 vs. ExPASy TrEMBL
Match: K7MB62 (Uncharacterized protein OS=Glycine max OX=3847 GN=100779625 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.5e-14
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 6   LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 52
           L RCE+DSLP+ISWVLDLAKAAVLRHGVR LVIDPY+ELDHQR PNQ
Sbjct: 534 LIRCEDDSLPNISWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPPNQ 580

[Close]
BLAST of IVF0011513 vs. ExPASy TrEMBL
Match: A0A445GTB3 (Twinkle-like protein, chloroplastic/mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_040807 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.5e-14
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 6   LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 52
           L RCE+DSLP+ISWVLDLAKAAVLRHGVR LVIDPY+ELDHQR PNQ
Sbjct: 534 LIRCEDDSLPNISWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPPNQ 580

[Close]
BLAST of IVF0011513 vs. ExPASy TrEMBL
Match: A0A498IYU5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_022175 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-13
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 6   LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 52
           L RCE+DSLP+ISWVLDLA+AAVLRHGVR LVIDPY+ELDHQR PNQ
Sbjct: 521 LIRCEDDSLPNISWVLDLAQAAVLRHGVRGLVIDPYNELDHQRPPNQ 567

[Close]
BLAST of IVF0011513 vs. ExPASy TrEMBL
Match: A0A7J6FQE3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_004075 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-13
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 6   LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 52
           L RCE+DSLP+I WVLDLAKAAVLRHGVR LVIDPY+ELDHQR PNQ
Sbjct: 534 LIRCEDDSLPNIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPPNQ 580

[Close]
BLAST of IVF0011513 vs. ExPASy TrEMBL
Match: A0A803QHB7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-13
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 6   LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 52
           L RCE+DSLP+I WVLDLAKAAVLRHGVR LVIDPY+ELDHQR PNQ
Sbjct: 532 LIRCEDDSLPNIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPPNQ 578

[Close]
BLAST of IVF0011513 vs. NCBI nr
Match: RVX16033.1 (Twinkle-like protein, chloroplastic/mitochondrial [Vitis vinifera])

HSP 1 Score: 80.5 bits (197), Expect = 2.68e-18
Identity = 39/45 (86.67%), Postives = 41/45 (91.11%), Query Frame = 0 

Query: 8  RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 51
          RCENDSLP+I WVLDLAKAAVLRHGVR LVIDPY+ELDHQR  NQ
Sbjct: 13 RCENDSLPNIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPANQ 57

[Close]
BLAST of IVF0011513 vs. NCBI nr
Match: PQQ11927.1 (hypothetical protein Pyn_26917 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 82.0 bits (201), Expect = 4.55e-18
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 6  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 51
          L RCE+DSLPSISWVL+LA+AAVLRHGVR LVIDPY+ELDHQR PNQ
Sbjct: 19 LIRCEDDSLPSISWVLELAQAAVLRHGVRGLVIDPYNELDHQRPPNQ 65

[Close]
BLAST of IVF0011513 vs. NCBI nr
Match: TQE12019.1 (hypothetical protein C1H46_002413 [Malus baccata])

HSP 1 Score: 82.4 bits (202), Expect = 1.18e-17
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 0 

Query: 6  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 51
          L RCE+DSLP+ISWVLDLA+AAVLRHGVR LVIDPY+ELDHQR PNQ
Sbjct: 19 LIRCEDDSLPNISWVLDLAQAAVLRHGVRGLVIDPYNELDHQRPPNQ 65

[Close]
BLAST of IVF0011513 vs. NCBI nr
Match: KAF3942664.1 (hypothetical protein CMV_030703, partial [Castanea mollissima])

HSP 1 Score: 80.5 bits (197), Expect = 2.06e-17
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 0 

Query: 6   LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 51
           L RCE+DSLPSI WVLDLAKAAVLRHGVR LVIDPY+ELDHQR  NQ
Sbjct: 91  LIRCEDDSLPSIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPANQ 137

[Close]
BLAST of IVF0011513 vs. NCBI nr
Match: RVW51091.1 (Twinkle-like protein, chloroplastic/mitochondrial [Vitis vinifera])

HSP 1 Score: 81.3 bits (199), Expect = 2.55e-17
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 0 

Query: 6  LTRCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 51
          L RCENDSLP+I WVLDLAKAAVLRHGVR LVIDPY+ELDHQR  NQ
Sbjct: 35 LIRCENDSLPNIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPANQ 81

[Close]
BLAST of IVF0011513 vs. TAIR 10
Match: AT1G30680.1 (toprim domain-containing protein )

HSP 1 Score: 74.7 bits (182), Expect = 2.5e-14
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 0 

Query: 8   RCENDSLPSISWVLDLAKAAVLRHGVR-LVIDPYSELDHQRLPNQ 52
           RCE DSLPSI WVL+ AKAAVLR+G+R LVIDPY+ELDHQR P Q
Sbjct: 542 RCEMDSLPSIDWVLERAKAAVLRYGIRGLVIDPYNELDHQRTPRQ 586

The following BLAST results are available for this feature:
BLAST of IVF0011513 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B5X5823.5e-1377.78Twinkle homolog protein, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=... [more]
BLAST of IVF0011513 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
K7MB629.5e-1487.23Uncharacterized protein OS=Glycine max OX=3847 GN=100779625 PE=4 SV=1[more]
A0A445GTB39.5e-1487.23Twinkle-like protein, chloroplastic/mitochondrial OS=Glycine soja OX=3848 GN=D0Y... [more]
A0A498IYU52.8e-1385.11Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_022175 PE=4 SV=1[more]
A0A7J6FQE32.8e-1385.11Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_004075 PE=4 SV=1[more]
A0A803QHB72.8e-1385.11Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
BLAST of IVF0011513 vs. NCBI nr
Match NameE-valueIdentityDescription
RVX16033.12.68e-1886.67Twinkle-like protein, chloroplastic/mitochondrial [Vitis vinifera][more]
PQQ11927.14.55e-1885.11hypothetical protein Pyn_26917 [Prunus yedoensis var. nudiflora][more]
TQE12019.11.18e-1785.11hypothetical protein C1H46_002413 [Malus baccata][more]
KAF3942664.12.06e-1785.11hypothetical protein CMV_030703, partial [Castanea mollissima][more]
RVW51091.12.55e-1785.11Twinkle-like protein, chloroplastic/mitochondrial [Vitis vinifera][more]
BLAST of IVF0011513 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G30680.12.5e-1477.78toprim domain-containing protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0011513.2IVF0011513.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0006260 DNA replication
molecular_function GO:0043139 5'-3' DNA helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003697 single-stranded DNA binding