IVF0011312 (gene) Melon (IVF77) v1

Overview


Name	IVF0011312
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Calcium-transporting ATPase 9, plasma membrane-type-like protein
Location	chr04: 27288255 .. 27289576 (+)
RNA-Seq Expression	IVF0011312
Synteny	IVF0011312

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAATTCAAATCCAACTCAATCTAACTCGTACAATTTGAATTTGAATTAGATAATGGGAGATGGATGGTTCCTGTATGTTAAATGTTGGAGAACACTCATATTTTAAACAATATATATTGATAATAAAATAATGAAGTTGACTTTGAAGAAAGGCAATTATGATTTGAAATGGGAAAAAAAACTAAAGAGTGGTTTTCTCTTTCTGTGACTTTTTATATATATATATATATATAAATGATGTCTCTCACATGGATATTTCTTCAAAACTCCCATCTTTTCCTTTTCCCCTTTGTGCAGATCTAATATTGGGTGTTTGTTTCCCAAGAAAACATGGGTCAGAAAATTTTCACCTTCTTCCTTCTCTTTCTCGCTTTCTCCTTTCTCCTCTCTTCTTCTTCCTCTTTTGCTGTTCCCACCACAAGTAAGTTCTTAATTATTTCCCTCTCATAATTTCATCTTCCCTCTTCTCTTCTTTCAATTTCTACTAATTAATTTTTTTTCTCTACTAGGAATCCTCAAATCAACTTTTGAACGCCACCCATCTTACCAAGCTTTGGTTCATGAGGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAGGAACCAAATAGTTGTGGATGTGGAAATTTGAAGAGTGTTTTGATGTTCTTTTTTGGTAGGATGTAAGAGATTTGGAGATAATTGATGGAGATTCATTTGAAAGATTGTTCGAAGGAAGATTGATTCTGGAGAACAATGATTATCCAGGGACAGGAGCAAACAATCACCATGATCCCAAGTCTCCTGCAAGACCATAGTTTTGCCACCGGAAGATGACGATTACTGTTTGATAACCATTTTACTTTTACTTTTCTTTTAATTTAAATGTTAAATATATATATGTATGTATGTATTTTTTTTGAGTCTTAACCAAAGTTTAGAAATAAAAGAGGTTAACTTTTAAATTTTATTATTTTTTATTTCTATAAACCTTGGTTAAGATTTCAAACAAAGAATTGTTATGGAAATGGAATGCCTTTGTAGGAAAAACAAAAAAAAAAGAAAAAAAAGTAACTAAGAAGTTTATTAGAAAAGAAAAGAAAAAGGGTAATTCTGTGTTTTTAGTTAGTTTCTTTGAGTCTCCTAATAAATGAGTGGAATGGTTTAATTTACCTTTTGTGCAGCAAAAATTAGTATTATTTGTTTGGACTTTTTCTCTCTTTGTAATATATATATATATATATATAGACACAAGTTATTTATTGGCTTAATTATTGTATATCCTATTCAATTCCCTACTTTGTGTTCCAACTTTAATTTTGTCTACTAATACATC

mRNA sequence

GTTTAATTCAAATCCAACTCAATCTAACTCGTACAATTTGAATTTGAATTAGATAATGGGAGATGGATGGTTCCTGTATGTTAAATGTTGGAGAACACTCATATTTTAAACAATATATATTGATAATAAAATAATGAAGTTGACTTTGAAGAAAGGCAATTATGATTTGAAATGGGAAAAAAAACTAAAGAGTGGTTTTCTCTTTCTGTGACTTTTTATATATATATATATATATAAATGATGTCTCTCACATGGATATTTCTTCAAAACTCCCATCTTTTCCTTTTCCCCTTTGTGCAGATCTAATATTGGGTGTTTGTTTCCCAAGAAAACATGGGTCAGAAAATTTTCACCTTCTTCCTTCTCTTTCTCGCTTTCTCCTTTCTCCTCTCTTCTTCTTCCTCTTTTGCTGTTCCCACCACAAGAATCCTCAAATCAACTTTTGAACGCCACCCATCTTACCAAGCTTTGGTTCATGAGGATGTAAGAGATTTGGAGATAATTGATGGAGATTCATTTGAAAGATTGTTCGAAGGAAGATTGATTCTGGAGAACAATGATTATCCAGGGACAGGAGCAAACAATCACCATGATCCCAAGTCTCCTGCAAGACCATAGTTTTGCCACCGGAAGATGACGATTACTGTTTGATAACCATTTTACTTTTACTTTTCTTTTAATTTAAATGTTAAATATATATATGTATGTATGTATTTTTTTTGAGTCTTAACCAAAGTTTAGAAATAAAAGAGGTTAACTTTTAAATTTTATTATTTTTTATTTCTATAAACCTTGGTTAAGATTTCAAACAAAGAATTGTTATGGAAATGGAATGCCTTTGTAGGAAAAACAAAAAAAAAAGAAAAAAAAGTAACTAAGAAGTTTATTAGAAAAGAAAAGAAAAAGGGTAATTCTGTGTTTTTAGTTAGTTTCTTTGAGTCTCCTAATAAATGAGTGGAATGGTTTAATTTACCTTTTGTGCAGCAAAAATTAGTATTATTTGTTTGGACTTTTTCTCTCTTTGTAATATATATATATATATATATAGACACAAGTTATTTATTGGCTTAATTATTGTATATCCTATTCAATTCCCTACTTTGTGTTCCAACTTTAATTTTGTCTACTAATACATC

Coding sequence (CDS)

ATGGGTCAGAAAATTTTCACCTTCTTCCTTCTCTTTCTCGCTTTCTCCTTTCTCCTCTCTTCTTCTTCCTCTTTTGCTGTTCCCACCACAAGAATCCTCAAATCAACTTTTGAACGCCACCCATCTTACCAAGCTTTGGTTCATGAGGATGTAAGAGATTTGGAGATAATTGATGGAGATTCATTTGAAAGATTGTTCGAAGGAAGATTGATTCTGGAGAACAATGATTATCCAGGGACAGGAGCAAACAATCACCATGATCCCAAGTCTCCTGCAAGACCATAG

Protein sequence

MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPARP

Homology

[Close]

BLAST of IVF0011312 vs. ExPASy TrEMBL
Match: A0A5A7UDI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002430 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.1e-44
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGD 60
          MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGD
Sbjct: 1  MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGD 60

Query: 61 SFERLFEGRLILENNDYPGTGANNHHDPKSPARP 95
          SFERLFEGRLILENNDYPGTGANNHHDPKSPARP
Sbjct: 61 SFERLFEGRLILENNDYPGTGANNHHDPKSPARP 94

[Close]

BLAST of IVF0011312 vs. ExPASy TrEMBL
Match: A0A0A0LHJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822320 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 87/94 (92.55%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGD 60
          MGQKIFTFFLLFLAFSFLLSS+SS AVPTTRILKSTF+ HPSYQALVH+DVRD+EIIDGD
Sbjct: 1  MGQKIFTFFLLFLAFSFLLSSNSSLAVPTTRILKSTFD-HPSYQALVHQDVRDMEIIDGD 60

Query: 61 SFERLFEGRLILENNDYPGTGANNHHDPKSPARP 95
          SFERLFEGRLILENNDYPGTGANNHHDPKSPA+P
Sbjct: 61 SFERLFEGRLILENNDYPGTGANNHHDPKSPAKP 93

[Close]

BLAST of IVF0011312 vs. ExPASy TrEMBL
Match: A0A6A6KJS2 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_004666 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.4e-13
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 10 LLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDG---DSFERLF 69
          LLFL FSF+L   SS AVP+TR LKST E   S Q  + +D  DL +++    D  E   
Sbjct: 13 LLFLGFSFVL---SSLAVPSTRSLKSTEENPSSVQDFLTQDAMDLNLVEEQVLDLGEGYI 72

Query: 70 EGRLILENNDYPGTGANNHHDPKSPAR 94
           GR+ LEN DYPGTGANNHHDPK+P R
Sbjct: 73 NGRMDLENTDYPGTGANNHHDPKTPGR 96

[Close]

BLAST of IVF0011312 vs. ExPASy TrEMBL
Match: A0A5B6ZB32 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010781 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 7.1e-12
Identity = 47/85 (55.29%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 10  LLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGDSF-ERLFEG 69
           +LFL F F+LSS+   AVPT+R LKS  E+ P+ Q L  + V D+   DG+   ER  EG
Sbjct: 48  VLFLGFYFVLSSA---AVPTSRSLKS-IEKDPTAQDLFAQSVMDMR-TDGELLEERFIEG 107

Query: 70  RLILENNDYPGTGANNHHDPKSPAR 94
           R+ +E+NDYPGTGANNHHDPK+P R
Sbjct: 108 RMDIESNDYPGTGANNHHDPKTPGR 127

[Close]

BLAST of IVF0011312 vs. ExPASy TrEMBL
Match: B9SI56 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1320880 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-11
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 10 LLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQA---LVHEDVRDLEIIDGDSFERLF 69
          L FL FSFLL   SS AVPTTR LKST E +PS      L+H++  DL    G+  + + 
Sbjct: 12 LFFLGFSFLL---SSLAVPTTRSLKST-EDNPSSSVQDFLIHQEGMDLS-SQGEELDFII 71

Query: 70 EGRLILENNDYPGTGANNHHDPKSPAR 94
           GR+ LE+ DYPGTGANNHHDPK+P R
Sbjct: 72 AGRMDLESTDYPGTGANNHHDPKTPGR 93

[Close]

BLAST of IVF0011312 vs. NCBI nr
Match: KAA0053852.1 (hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (472), Expect = 2.89e-59
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGD 60
          MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGD
Sbjct: 1  MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGD 60

Query: 61 SFERLFEGRLILENNDYPGTGANNHHDPKSPARP 94
          SFERLFEGRLILENNDYPGTGANNHHDPKSPARP
Sbjct: 61 SFERLFEGRLILENNDYPGTGANNHHDPKSPARP 94

[Close]

BLAST of IVF0011312 vs. NCBI nr
Match: KGN59481.1 (hypothetical protein Csa_001422 [Cucumis sativus])

HSP 1 Score: 172 bits (435), Expect = 1.24e-53
Identity = 87/94 (92.55%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MGQKIFTFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGD 60
          MGQKIFTFFLLFLAFSFLLSS+SS AVPTTRILKSTF+ HPSYQALVH+DVRD+EIIDGD
Sbjct: 1  MGQKIFTFFLLFLAFSFLLSSNSSLAVPTTRILKSTFD-HPSYQALVHQDVRDMEIIDGD 60

Query: 61 SFERLFEGRLILENNDYPGTGANNHHDPKSPARP 94
          SFERLFEGRLILENNDYPGTGANNHHDPKSPA+P
Sbjct: 61 SFERLFEGRLILENNDYPGTGANNHHDPKSPAKP 93

[Close]

BLAST of IVF0011312 vs. NCBI nr
Match: KAG6596972.1 (hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028446.1 hypothetical protein SDJN02_09627 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 103 bits (258), Expect = 1.37e-26
Identity = 60/90 (66.67%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 7  TFFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEIIDGDSFE--- 66
          TF LLFLAF+FL+SS+   AVPTTR+L+S F+  PS Q  V +D RDLEI   DS E   
Sbjct: 10 TFLLLFLAFAFLISST---AVPTTRVLQSNFD-DPSAQPSVFQDWRDLEISGEDSLEFVD 69

Query: 67 -RLFEGRLILENNDYPGTGANNHHDPKSPA 92
           RL EGR++LENNDYPGTGANNHHDPKSPA
Sbjct: 70 ERLSEGRVVLENNDYPGTGANNHHDPKSPA 95

[Close]

BLAST of IVF0011312 vs. NCBI nr
Match: KAG7017658.1 (hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 100 bits (249), Expect = 2.48e-25
Identity = 62/98 (63.27%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1  MGQKIFT----FFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEI 60
          MGQKI        LLFL FS LLSS    AVPTTRI KSTF++ PS Q  V +DVRDLE 
Sbjct: 1  MGQKISLSLRRLLLLFLGFSLLLSSV---AVPTTRIFKSTFDQ-PSAQDFVFQDVRDLEF 60

Query: 61 IDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPARP 94
            GD F     GRL+LENNDYPGTGANNHHDP +PA+P
Sbjct: 61 NGGDLF-----GRLVLENNDYPGTGANNHHDPNTPAKP 89

[Close]

BLAST of IVF0011312 vs. NCBI nr
Match: KAG6580910.1 (hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.0 bits (245), Expect = 1.01e-24
Identity = 61/98 (62.24%), Postives = 67/98 (68.37%), Query Frame = 0


Query: 1  MGQKIFT----FFLLFLAFSFLLSSSSSFAVPTTRILKSTFERHPSYQALVHEDVRDLEI 60
          MGQKI        LLFL FS LLSS    AVPTTRI KSTF++ PS Q  V +DVRDLE 
Sbjct: 1  MGQKISLSLQRLLLLFLGFSLLLSSV---AVPTTRIFKSTFDQ-PSAQDFVFQDVRDLEF 60

Query: 61 IDGDSFERLFEGRLILENNDYPGTGANNHHDPKSPARP 94
            GD F     GR +LENNDYPGTGANNHHDP +PA+P
Sbjct: 61 NGGDLF-----GRFVLENNDYPGTGANNHHDPNTPAKP 89

The following BLAST results are available for this feature:

BLAST of IVF0011312 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011312 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDI6	4.1e-44	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LHJ0	1.1e-39	92.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822320 PE=4 SV=1	[more]
A0A6A6KJS2	8.4e-13	55.17	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_004666 PE=4 SV=1	[more]
A0A5B6ZB32	7.1e-12	55.29	Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010781...	[more]
B9SI56	1.2e-11	55.17	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1320880 PE=4 SV=1	[more]

BLAST of IVF0011312 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053852.1	2.89e-59	100.00	hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]	[more]
KGN59481.1	1.24e-53	92.55	hypothetical protein Csa_001422 [Cucumis sativus]	[more]
KAG6596972.1	1.37e-26	66.67	hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7017658.1	2.48e-25	63.27	hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6580910.1	1.01e-24	62.24	hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0011312 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..94
None	No IPR available	PANTHER	PTHR33474	TRANSMEMBRANE PROTEIN	coord: 4..93
None	No IPR available	PANTHER	PTHR33474:SF28	PROTEIN, PUTATIVE-RELATED	coord: 4..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011312.1	IVF0011312.1	mRNA