IVF0011272 (gene) Melon (IVF77) v1

Overview


Name	IVF0011272
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	(thale cress) hypothetical protein
Location	chr04: 28243061 .. 28243684 (+)
RNA-Seq Expression	IVF0011272
Synteny	IVF0011272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTTTCTCTCTCATCATCACAAAACCAAAAAATCAAAAGTAGAGAAAGTCCGATCAATGGGGAAATTCGTTGAATTGTTGGATGTAGGAGTAAGAATGGCGGCGAGATTTCACTCTCACTGTCCTCAAACTGCTCGGCTTTACTACCATCCTCCATCCGATCACGACTCCGACCACCACCATCACCAACATTATTTGCACCAGATTTTTCAGGCGTACGACGGCGGCCGTCACGGCGGACACTCAACGGAGCTGGTTACGGCATATGGAATGAAGACGATGGCCACGGATGGGAGTTTTGATGCAGAGAATGTGTTTCATTCGGCGGATTTTGATGATTTTGATTCGATTTAGGGATTTTTCTTTTCTTTTTGTGTAATTTATGAATTGTGCATGCCATTACACATGCCAATCGATATGGTGAAATTGTTATAAATAAAGAATAAATACAATTGTTTTAACTGATGCAAAGAGTTTCAAATGAATGGAAGAGTTTCGTTTTGAGGAATATTTGAGTTGGAAATTAATGAATTGTGGAGTGGTTGAGGAAGAAGAAAAGAAAAGGATGGTGTTTTTTTGTCGTTTTGGATTGGTTCAGAGTCTGAAGTTATTGGAAGATGGG

mRNA sequence

TTCCCTTTCTCTCTCATCATCACAAAACCAAAAAATCAAAAGTAGAGAAAGTCCGATCAATGGGGAAATTCGTTGAATTGTTGGATGTAGGAGTAAGAATGGCGGCGAGATTTCACTCTCACTGTCCTCAAACTGCTCGGCTTTACTACCATCCTCCATCCGATCACGACTCCGACCACCACCATCACCAACATTATTTGCACCAGATTTTTCAGGCGTACGACGGCGGCCGTCACGGCGGACACTCAACGGAGCTGGTTACGGCATATGGAATGAAGACGATGGCCACGGATGGGAGTTTTGATGCAGAGAATGTGTTTCATTCGGCGGATTTTGATGATTTTGATTCGATTTAGGGATTTTTCTTTTCTTTTTGTGTAATTTATGAATTGTGCATGCCATTACACATGCCAATCGATATGGTGAAATTGTTATAAATAAAGAATAAATACAATTGTTTTAACTGATGCAAAGAGTTTCAAATGAATGGAAGAGTTTCGTTTTGAGGAATATTTGAGTTGGAAATTAATGAATTGTGGAGTGGTTGAGGAAGAAGAAAAGAAAAGGATGGTGTTTTTTTGTCGTTTTGGATTGGTTCAGAGTCTGAAGTTATTGGAAGATGGG

Coding sequence (CDS)

ATGGGGAAATTCGTTGAATTGTTGGATGTAGGAGTAAGAATGGCGGCGAGATTTCACTCTCACTGTCCTCAAACTGCTCGGCTTTACTACCATCCTCCATCCGATCACGACTCCGACCACCACCATCACCAACATTATTTGCACCAGATTTTTCAGGCGTACGACGGCGGCCGTCACGGCGGACACTCAACGGAGCTGGTTACGGCATATGGAATGAAGACGATGGCCACGGATGGGAGTTTTGATGCAGAGAATGTGTTTCATTCGGCGGATTTTGATGATTTTGATTCGATTTAG

Protein sequence

MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHGGHSTELVTAYGMKTMATDGSFDAENVFHSADFDDFDSI

Homology

[Close]

BLAST of IVF0011272 vs. ExPASy TrEMBL
Match: A0A5A7TQ55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005960 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.1e-47
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60
          MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60

Query: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 93
          GHSTELVTAYGMKTMATDGSFDAENVFHSADF
Sbjct: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 92

[Close]

BLAST of IVF0011272 vs. ExPASy TrEMBL
Match: A0A1S3B7E5 (uncharacterized protein LOC103486822 OS=Cucumis melo OX=3656 GN=LOC103486822 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.1e-47
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60
          MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60

Query: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 93
          GHSTELVTAYGMKTMATDGSFDAENVFHSADF
Sbjct: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 92

[Close]

BLAST of IVF0011272 vs. ExPASy TrEMBL
Match: A0A0A0LEL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813040 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-39
Identity = 85/93 (91.40%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1   MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSD-HHHHQHYLHQIFQAYDGGRH 60
           MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSD HHHH HYLHQIFQAYD    
Sbjct: 35  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDGHHHHHHYLHQIFQAYD---- 94

Query: 61  GGHSTELVTAYGMKTMATDGSFDAENVFHSADF 93
           GGHSTELVTAYGMKT+A DGSFDAENVFHSADF
Sbjct: 95  GGHSTELVTAYGMKTVAMDGSFDAENVFHSADF 123

[Close]

BLAST of IVF0011272 vs. ExPASy TrEMBL
Match: A0A6J1DN79 (uncharacterized protein LOC111021559 OS=Momordica charantia OX=3673 GN=LOC111021559 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 64/95 (67.37%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60
          M K VELLDVGVRMAARFH+HCPQTARLYYHPPSDHD  H    HYLHQI  AYDG   G
Sbjct: 1  MAKLVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDDQH----HYLHQILHAYDG---G 60

Query: 61 GHST-ELVTAYGMKT--MATDGSFDAENVFHSADF 93
          GHST   V+  G++T   A   SFD E VFH+ADF
Sbjct: 61 GHSTAHQVSGCGIETAARARARSFDTEIVFHTADF 88

[Close]

BLAST of IVF0011272 vs. ExPASy TrEMBL
Match: A0A059DHX5 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02351 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 46/71 (64.79%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 1   MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGG--- 60
           MGK+VELLD+GVR+AARFHSHCPQTARLYYHPPS+HD  HHHH    H    A DG    
Sbjct: 55  MGKYVELLDLGVRVAARFHSHCPQTARLYYHPPSNHDDHHHHHHRDFHSSGGASDGSCPD 114

Query: 61  -RHGGHSTELV 68
            R    STEL+
Sbjct: 115 HRLRIDSTELI 125

[Close]

BLAST of IVF0011272 vs. NCBI nr
Match: XP_008443147.1 (PREDICTED: uncharacterized protein LOC103486822 [Cucumis melo] >KAA0043681.1 uncharacterized protein E6C27_scaffold236G00060 [Cucumis melo var. makuwa] >TYK25450.1 uncharacterized protein E5676_scaffold352G005960 [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (498), Expect = 3.46e-63
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60
          MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60

Query: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 92
          GHSTELVTAYGMKTMATDGSFDAENVFHSADF
Sbjct: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 92

[Close]

BLAST of IVF0011272 vs. NCBI nr
Match: XP_011652134.1 (uncharacterized protein LOC105434988 [Cucumis sativus])

HSP 1 Score: 171 bits (433), Expect = 2.61e-53
Identity = 85/93 (91.40%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSD-HHHHQHYLHQIFQAYDGGRH 60
          MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSD HHHH HYLHQIFQAYDGG  
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDGHHHHHHYLHQIFQAYDGG-- 60

Query: 61 GGHSTELVTAYGMKTMATDGSFDAENVFHSADF 92
            HSTELVTAYGMKT+A DGSFDAENVFHSADF
Sbjct: 61 --HSTELVTAYGMKTVAMDGSFDAENVFHSADF 89

[Close]

BLAST of IVF0011272 vs. NCBI nr
Match: KGN59359.1 (hypothetical protein Csa_002350 [Cucumis sativus])

HSP 1 Score: 171 bits (433), Expect = 7.54e-53
Identity = 85/93 (91.40%), Postives = 86/93 (92.47%), Query Frame = 0


Query: 1   MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSD-HHHHQHYLHQIFQAYDGGRH 60
           MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSD HHHH HYLHQIFQAYDGG  
Sbjct: 35  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDGHHHHHHYLHQIFQAYDGG-- 94

Query: 61  GGHSTELVTAYGMKTMATDGSFDAENVFHSADF 92
             HSTELVTAYGMKT+A DGSFDAENVFHSADF
Sbjct: 95  --HSTELVTAYGMKTVAMDGSFDAENVFHSADF 123

[Close]

BLAST of IVF0011272 vs. NCBI nr
Match: KAG6580839.1 (hypothetical protein SDJN03_20841, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017595.1 hypothetical protein SDJN02_19461, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142 bits (359), Expect = 5.21e-42
Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60
          M KFVELLDVGVRMAARFH+HCPQTARLYYHPPSDHD D+HH+  YLHQ FQA DG RHG
Sbjct: 1  MAKFVELLDVGVRMAARFHAHCPQTARLYYHPPSDHDGDNHHN--YLHQFFQASDGFRHG 60

Query: 61 GHSTELVTAYGMKTMATDGSFDAENVFHSADF 92
          GHST+LVT  G++T+A    FDAE VFH+ADF
Sbjct: 61 GHSTDLVTGCGVETVAMARGFDAEIVFHTADF 90

[Close]

BLAST of IVF0011272 vs. NCBI nr
Match: KAG7027749.1 (hypothetical protein SDJN02_08926, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138 bits (348), Expect = 2.88e-40
Identity = 66/86 (76.74%), Postives = 71/86 (82.56%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGGRHG 60
          MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHD DHHHH +Y H +FQAYDGGRH 
Sbjct: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDGDHHHHHNYFHHVFQAYDGGRHA 60

Query: 61 GHSTELVTAYGMKTMATDGSFDAENV 86
          G ST+LV A G+ T+A     DAE V
Sbjct: 61 GPSTDLVEACGVDTVAMARGSDAEVV 86

[Close]

BLAST of IVF0011272 vs. TAIR 10
Match: AT3G57450.1 (unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 4.1e-15
Identity = 46/82 (56.10%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 1  MGKFVELLDVGVRMAARFHSHCPQTARLYYHPPSDHDSDHHHHQHYLHQIFQAYDGG--- 60
          MGK+ E+LDVGVR+AARFHSHCPQTARLYYHPPSD   +HHHH      +     GG   
Sbjct: 1  MGKYTEMLDVGVRIAARFHSHCPQTARLYYHPPSD---NHHHH----GGVKDLIGGGGVL 60

Query: 61 RHGGHSTELVTAYGMKTMATDG 80
            G +ST LV   G  T  T G
Sbjct: 61 GSGQNSTGLVGGLGTGTGTTGG 75

The following BLAST results are available for this feature:

BLAST of IVF0011272 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0011272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQ55	7.1e-47	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7E5	7.1e-47	100.00	uncharacterized protein LOC103486822 OS=Cucumis melo OX=3656 GN=LOC103486822 PE=...	[more]
A0A0A0LEL3	2.4e-39	91.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813040 PE=4 SV=1	[more]
A0A6J1DN79	1.6e-22	67.37	uncharacterized protein LOC111021559 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A059DHX5	1.6e-14	64.79	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02351 PE=4 SV...	[more]

BLAST of IVF0011272 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443147.1	3.46e-63	100.00	PREDICTED: uncharacterized protein LOC103486822 [Cucumis melo] >KAA0043681.1 unc...	[more]
XP_011652134.1	2.61e-53	91.40	uncharacterized protein LOC105434988 [Cucumis sativus]	[more]
KGN59359.1	7.54e-53	91.40	hypothetical protein Csa_002350 [Cucumis sativus]	[more]
KAG6580839.1	5.21e-42	76.09	hypothetical protein SDJN03_20841, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027749.1	2.88e-40	76.74	hypothetical protein SDJN02_08926, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of IVF0011272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57450.1	4.1e-15	56.10	unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33983	OS07G0185900 PROTEIN	coord: 1..91
None	No IPR available	PANTHER	PTHR33983:SF13	SUBFAMILY NOT NAMED	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011272.1	IVF0011272.1	mRNA