IVF0011249 (gene) Melon (IVF77) v1

Overview


Name	IVF0011249
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	tetrapyrrole-binding protein, chloroplastic
Location	chr03: 10478477 .. 10479502 (+)
RNA-Seq Expression	IVF0011249
Synteny	IVF0011249

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCAATCAAAATTCTCTCAAAACCCCAAAACCCCTCTTTTTCACATTTTCAATTTTCATTAACTTTCTCTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCTCATGGCAGCTTCCCACTCTCTCCCATCTCTCCGCCCCTCTCTCCGCCACCCTCACCGCCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAGCTTCCACCGCCGCCGTCACCACCACCACTACCGCCGCCACTTCCTCTCTCTCCGCCGCAGCTGCCGGCTCCTTCTCTCTCTCCTCAGACACCTCCTCCGCCATCTCTTTCGACGAGCTCGACCGCCTCCTAGCCGCCAAAGACTTCCGGAAAGCCGACGAGGAGACCCGCCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCCCTGAAAAGAGGGTACGTCTATTTCTCTGAAGTTCAATTCATTGCCGCCGAGGATCTGAAAGCCATTGACGATTTGTGGCAGAAACACAGCGATGGGAAATTTGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACGAAATTGTTTATGAAACTTGGGTGGATGAAGAAGCTGGATACTGAAATTGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTTATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTGCCATTGACTAATGCTTTGAGAGGGACACAGTTAATGAGCAATATTTTGAACCATCCGGCGTTTGAGGAGGACGCCATTGAAGAGAAAGGTGAAGAAAAAATTGCAGGGGATGAAAATGGAGGATTGAAGAAAGGATTGAAATCGATTACTGAGAGGCTTTTCAAAAGGGATTATAGCTTTTGAAATTGGGGATTTTGGAGAGTACCCATTGGAATTTACATCGAATTCCCAATTGGGTTGTTTCGATTTGGGATGAATTCGGTTCATTTTGTTCTTCACACTTCTTTCTCTCTCTCTCTGACGGGTGACTTTTCAGTGTATTTTAAAGGATA

mRNA sequence

CTCTCAATCAAAATTCTCTCAAAACCCCAAAACCCCTCTTTTTCACATTTTCAATTTTCATTAACTTTCTCTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCTCATGGCAGCTTCCCACTCTCTCCCATCTCTCCGCCCCTCTCTCCGCCACCCTCACCGCCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAGCTTCCACCGCCGCCGTCACCACCACCACTACCGCCGCCACTTCCTCTCTCTCCGCCGCAGCTGCCGGCTCCTTCTCTCTCTCCTCAGACACCTCCTCCGCCATCTCTTTCGACGAGCTCGACCGCCTCCTAGCCGCCAAAGACTTCCGGAAAGCCGACGAGGAGACCCGCCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCCCTGAAAAGAGGGTACGTCTATTTCTCTGAAGTTCAATTCATTGCCGCCGAGGATCTGAAAGCCATTGACGATTTGTGGCAGAAACACAGCGATGGGAAATTTGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACGAAATTGTTTATGAAACTTGGGTGGATGAAGAAGCTGGATACTGAAATTGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTTATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTGCCATTGACTAATGCTTTGAGAGGGACACAGTTAATGAGCAATATTTTGAACCATCCGGCGTTTGAGGAGGACGCCATTGAAGAGAAAGGTGAAGAAAAAATTGCAGGGGATGAAAATGGAGGATTGAAGAAAGGATTGAAATCGATTACTGAGAGGCTTTTCAAAAGGGATTATAGCTTTTGAAATTGGGGATTTTGGAGAGTACCCATTGGAATTTACATCGAATTCCCAATTGGGTTGTTTCGATTTGGGATGAATTCGGTTCATTTTGTTCTTCACACTTCTTTCTCTCTCTCTCTGACGGGTGACTTTTCAGTGTATTTTAAAGGATA

Coding sequence (CDS)

ATGGCAGCTTCCCACTCTCTCCCATCTCTCCGCCCCTCTCTCCGCCACCCTCACCGCCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAGCTTCCACCGCCGCCGTCACCACCACCACTACCGCCGCCACTTCCTCTCTCTCCGCCGCAGCTGCCGGCTCCTTCTCTCTCTCCTCAGACACCTCCTCCGCCATCTCTTTCGACGAGCTCGACCGCCTCCTAGCCGCCAAAGACTTCCGGAAAGCCGACGAGGAGACCCGCCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCCCTGAAAAGAGGGTACGTCTATTTCTCTGAAGTTCAATTCATTGCCGCCGAGGATCTGAAAGCCATTGACGATTTGTGGCAGAAACACAGCGATGGGAAATTTGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACGAAATTGTTTATGAAACTTGGGTGGATGAAGAAGCTGGATACTGAAATTGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTTATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTGCCATTGACTAATGCTTTGAGAGGGACACAGTTAATGAGCAATATTTTGAACCATCCGGCGTTTGAGGAGGACGCCATTGAAGAGAAAGGTGAAGAAAAAATTGCAGGGGATGAAAATGGAGGATTGAAGAAAGGATTGAAATCGATTACTGAGAGGCTTTTCAAAAGGGATTATAGCTTTTGA

Protein sequence

MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAGSFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLKKGLKSITERLFKRDYSF

Homology

[Close]

BLAST of IVF0011249 vs. ExPASy Swiss-Prot
Match: Q9LX31 (Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GUN4 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 6.1e-55
Identity = 127/254 (50.00%), Postives = 178/254 (70.08%), Query Frame = 0


Query: 12  PSLRHPHRPNLSPTSFSSSSTLFLKPASTAAV------TTTTTAATSSLSAAAAGSFSLS 71
           PS  H HR NL   S    ++L LK  ++AA        ++T+++T+++SA +  + S +
Sbjct: 15  PSYTH-HRNNLHCQSHFGPTSLSLKQPTSAATFSLICSASSTSSSTTAVSAVSTTNASAT 74

Query: 72  SDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIAAEDLK 131
           +  ++ I FD L+  L  ++FR+ADEETRRLLI ++G+ A+KRGYV+FSEV+ I+ EDL+
Sbjct: 75  TAETATI-FDVLENHLVNQNFRQADEETRRLLIQISGEAAVKRGYVFFSEVKTISPEDLQ 134

Query: 132 AIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAFPTEFI 191
           AID+LW KHSDG+FGYSVQ++I+ KV KDFT+ F+K+ WMK LDTE+ QYNYRAFP EF 
Sbjct: 135 AIDNLWIKHSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEVVQYNYRAFPDEFK 194

Query: 192 WELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLKKGLKS 251
           WEL +ETP GHLPLTNALRGTQL+  +L+HPAF   A +  GE +   +    + K    
Sbjct: 195 WELNDETPLGHLPLTNALRGTQLLKCVLSHPAF-ATADDNSGETEDELNRGVAVAKEQAG 254

Query: 252 I--TERLFKRDYSF 258
           +   +R+FK +YSF
Sbjct: 255 VGADKRVFKTNYSF 265

[Close]

BLAST of IVF0011249 vs. ExPASy Swiss-Prot
Match: Q1XDT5 (Uncharacterized protein ycf53 OS=Pyropia yezoensis OX=2788 GN=ycf53 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-25
Identity = 62/152 (40.79%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 68  TSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIAAEDLKAI 127
           ++  +++ +L  LL  +D  KAD+ T++ LI LAG  A  R ++YF++++ I A+DL+ I
Sbjct: 93  SAQQMNYKDLQMLLTHRDLLKADQLTQQKLIQLAGVNAQTRNWLYFTDIKKIPAQDLQTI 152

Query: 128 DDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAFPTEFIWE 187
           D LW  HS GKFG  VQ++I+  V KD+ K + K+GW      E+++   R +P EF W 
Sbjct: 153 DKLWHTHSKGKFGLFVQRQIWLSVGKDWGKFWQKIGW------EVDRIPCR-YPEEFQW- 212

Query: 188 LTEETPEGHLPLTNALRGTQLMSNILNHPAFE 220
                P GHLPL N LRG Q++S +  H A+E
Sbjct: 213 -NSHGPRGHLPLFNQLRGVQVLSALFTHKAWE 235

[Close]

BLAST of IVF0011249 vs. ExPASy Swiss-Prot
Match: P72583 (Ycf53-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0558 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.3e-24
Identity = 64/161 (39.75%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 60  GSFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFI 119
           G F L S  +  I +  L   L ++DF  ADE TR  L  LAG GA +R ++YF+EV+  
Sbjct: 81  GIFPLQS--AQGIDYLPLQEALGSQDFETADEITRDKLCELAGPGASQRQWLYFTEVEKF 140

Query: 120 AAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRA 179
            A DL  I+ LW  HS+G FG+SVQ+R++    K+FTKL+ K+GW            +  
Sbjct: 141 PALDLHTINALWWLHSNGNFGFSVQRRLWLASGKEFTKLWPKIGWK-------SGNVWTR 200

Query: 180 FPTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEE 221
           +P  F W+L+   P+GHLPL N LRG ++  ++  HP + +
Sbjct: 201 WPKGFTWDLS--APQGHLPLLNQLRGVRVAESLYRHPVWSQ 230

[Close]

BLAST of IVF0011249 vs. ExPASy Swiss-Prot
Match: P51202 (Uncharacterized protein ycf53 OS=Porphyra purpurea OX=2787 GN=ycf53 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.0e-22
Identity = 57/152 (37.50%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 68  TSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIAAEDLKAI 127
           ++  + + +L  LL   +   AD+ T++ LI LAG     R ++YF++++ I  EDL+ I
Sbjct: 94  SNKQMDYQDLQILLVQNNLIAADKLTQQKLIKLAGVDEKSRNWLYFTDIKKIPVEDLQTI 153

Query: 128 DDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAFPTEFIWE 187
           D LW  HS GKFG+ VQ++I+  + K++ + + K+GW      EI +   R +P EF W 
Sbjct: 154 DQLWNAHSKGKFGFFVQRQIWLALEKNWEQFWYKIGW------EINRVPCR-YPEEFHWN 213

Query: 188 LTEETPEGHLPLTNALRGTQLMSNILNHPAFE 220
            T   P+GHLPL N LRG Q++S + +H A++
Sbjct: 214 ST--GPKGHLPLCNQLRGVQVLSALFSHKAWD 236

[Close]

BLAST of IVF0011249 vs. ExPASy Swiss-Prot
Match: O19887 (Uncharacterized protein ycf53 OS=Cyanidium caldarium OX=2771 GN=ycf53 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.4e-21
Identity = 49/142 (34.51%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 74  FDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIAAEDLKAIDDLWQK 133
           ++ L+ LL+A +F +A++ T+++L+ LAG+ + +R ++YF++V  I  + +  ++ LW+ 
Sbjct: 102 YETLESLLSANNFFEANKFTQQILLELAGEQSKQRNWMYFTDVHSINHQSVSDLNHLWEL 161

Query: 134 HSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAFPTEFIWELTEETP 193
           +S G FG+S+QKRI+  VNK++ K + K+GW+           +  +P EF+W +    P
Sbjct: 162 YSQGNFGFSIQKRIWISVNKNWKKFWKKIGWIN------SNSKWLKYPGEFMWAV--NAP 221

Query: 194 EGHLPLTNALRGTQLMSNILNH 216
            GHLPL N LRG  ++  I ++
Sbjct: 222 PGHLPLFNQLRGVYVLEFIFDY 235

[Close]

BLAST of IVF0011249 vs. ExPASy TrEMBL
Match: A0A5A7SPC7 (Tetrapyrrole-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00620 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60
           MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG
Sbjct: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120
           SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA
Sbjct: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120

Query: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180
           AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF
Sbjct: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240

Query: 241 KGLKSITERLFKRDYSF 258
           KGLKSITERLFKRDYSF
Sbjct: 241 KGLKSITERLFKRDYSF 257

[Close]

BLAST of IVF0011249 vs. ExPASy TrEMBL
Match: A0A1S3BE43 (tetrapyrrole-binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488673 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60
           MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG
Sbjct: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120
           SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA
Sbjct: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120

Query: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180
           AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF
Sbjct: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240

Query: 241 KGLKSITERLFKRDYSF 258
           KGLKSITERLFKRDYSF
Sbjct: 241 KGLKSITERLFKRDYSF 257

[Close]

BLAST of IVF0011249 vs. ExPASy TrEMBL
Match: A0A0A0KCD2 (GUN4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042370 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.2e-124
Identity = 244/260 (93.85%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAV--TTTTTAATSSLSAAA 60
           MA SHSLPSLR SLRHPHRPNLSPTSFSSSSTLFLKP S+ AV  TTTTTAATSSLSAAA
Sbjct: 1   MATSHSLPSLRHSLRHPHRPNLSPTSFSSSSTLFLKPTSSTAVTTTTTTTAATSSLSAAA 60

Query: 61  AGSFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQF 120
           AGSFSLSSDTSSAISFDELDRLL AKDFR+ADEETRRLLIALAG+GALKRGYVYFSEVQF
Sbjct: 61  AGSFSLSSDTSSAISFDELDRLLGAKDFRQADEETRRLLIALAGEGALKRGYVYFSEVQF 120

Query: 121 IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR 180
           IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR
Sbjct: 121 IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR 180

Query: 181 AFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAG-DENG 240
           AFPTEFIWELTE+TPEGHLPLTNALRGT+LMSNILNHPAF E+AIEEKGEEKIAG  ENG
Sbjct: 181 AFPTEFIWELTEDTPEGHLPLTNALRGTRLMSNILNHPAFGEEAIEEKGEEKIAGVVENG 240

Query: 241 GLKKGLKSITERLFKRDYSF 258
           GLKKGLKSITERLFKRDYSF
Sbjct: 241 GLKKGLKSITERLFKRDYSF 260

[Close]

BLAST of IVF0011249 vs. ExPASy TrEMBL
Match: A0A6J1GMW2 (tetrapyrrole-binding protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455853 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 3.2e-107
Identity = 210/257 (81.71%), Postives = 231/257 (89.88%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60
           MAASHSLPSLR +L  PHRPNLSP  FSSSS L LK  ST    T   AATSSLSAAAA 
Sbjct: 1   MAASHSLPSLRHTLSRPHRPNLSPNPFSSSS-LLLKSTST-PTATAAVAATSSLSAAAAS 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120
           SFSLSSDTSSA+SFDEL+R LAAK+FR+ADEETRRLLIALAGD A KRGYVYFSEVQF++
Sbjct: 61  SFSLSSDTSSAVSFDELERHLAAKNFRQADEETRRLLIALAGDAAQKRGYVYFSEVQFVS 120

Query: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180
           +++LKAIDDLWQK+SDGKFGYSVQKR+FEKVN+DFTKLFMKLGWMKKLDTEIEQYNYRAF
Sbjct: 121 SDNLKAIDDLWQKYSDGKFGYSVQKRVFEKVNRDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLM+NIL+HPAFEEDAIE   +E +A DENGG K
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMTNILSHPAFEEDAIEGGAQENVAADENGGFK 240

Query: 241 KGLKSITERLFKRDYSF 258
           KGLK+++ER+FKRDYSF
Sbjct: 241 KGLKTMSERIFKRDYSF 255

[Close]

BLAST of IVF0011249 vs. ExPASy TrEMBL
Match: A0A6J1JPI7 (tetrapyrrole-binding protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488677 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106
Identity = 210/261 (80.46%), Postives = 234/261 (89.66%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSF---SSSSTLFLKPASTAAVTTTTT-AATSSLSA 60
           MAASHSLPSLR +LR PHRPNLSP  F   SSSS+L L+  ST   T T   AATSSLSA
Sbjct: 1   MAASHSLPSLRHTLRRPHRPNLSPNPFSSSSSSSSLLLQSTSTPTATATAAIAATSSLSA 60

Query: 61  AAAGSFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEV 120
           AAA SFSLSSDTSSA+SFDEL+R LAAK+FR+AD+ETRRLLIALAGD A KRGYVYFSEV
Sbjct: 61  AAASSFSLSSDTSSAVSFDELERHLAAKNFRQADKETRRLLIALAGDAAQKRGYVYFSEV 120

Query: 121 QFIAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYN 180
           QFI++++LKAIDDLWQK+SDGKFGY VQKR+FEKVN+DFTKLFMKLGWMKKLDTEIEQYN
Sbjct: 121 QFISSDNLKAIDDLWQKYSDGKFGYRVQKRVFEKVNRDFTKLFMKLGWMKKLDTEIEQYN 180

Query: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDEN 240
           YRAFPTEFIWELTEETPEGHLPLTNALRGTQLM+NIL++PAFEEDAIE   +E +AGDEN
Sbjct: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMTNILSNPAFEEDAIEGGAQENVAGDEN 240

Query: 241 GGLKKGLKSITERLFKRDYSF 258
           GG KKGLK+++ER+FKRDYSF
Sbjct: 241 GGFKKGLKTMSERIFKRDYSF 261

[Close]

BLAST of IVF0011249 vs. NCBI nr
Match: XP_008445737.1 (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis melo] >KAA0033042.1 tetrapyrrole-binding protein [Cucumis melo var. makuwa] >TYK03457.1 tetrapyrrole-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 490 bits (1261), Expect = 3.09e-174
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60
           MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG
Sbjct: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120
           SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA
Sbjct: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120

Query: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180
           AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF
Sbjct: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240

Query: 241 KGLKSITERLFKRDYSF 257
           KGLKSITERLFKRDYSF
Sbjct: 241 KGLKSITERLFKRDYSF 257

[Close]

BLAST of IVF0011249 vs. NCBI nr
Match: XP_004140886.1 (tetrapyrrole-binding protein, chloroplastic [Cucumis sativus] >KGN46002.1 hypothetical protein Csa_004798 [Cucumis sativus])

HSP 1 Score: 456 bits (1172), Expect = 1.26e-160
Identity = 244/260 (93.85%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTT--AATSSLSAAA 60
           MA SHSLPSLR SLRHPHRPNLSPTSFSSSSTLFLKP S+ AVTTTTT  AATSSLSAAA
Sbjct: 1   MATSHSLPSLRHSLRHPHRPNLSPTSFSSSSTLFLKPTSSTAVTTTTTTTAATSSLSAAA 60

Query: 61  AGSFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQF 120
           AGSFSLSSDTSSAISFDELDRLL AKDFR+ADEETRRLLIALAG+GALKRGYVYFSEVQF
Sbjct: 61  AGSFSLSSDTSSAISFDELDRLLGAKDFRQADEETRRLLIALAGEGALKRGYVYFSEVQF 120

Query: 121 IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR 180
           IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR
Sbjct: 121 IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR 180

Query: 181 AFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGD-ENG 240
           AFPTEFIWELTE+TPEGHLPLTNALRGT+LMSNILNHPAF E+AIEEKGEEKIAG  ENG
Sbjct: 181 AFPTEFIWELTEDTPEGHLPLTNALRGTRLMSNILNHPAFGEEAIEEKGEEKIAGVVENG 240

Query: 241 GLKKGLKSITERLFKRDYSF 257
           GLKKGLKSITERLFKRDYSF
Sbjct: 241 GLKKGLKSITERLFKRDYSF 260

[Close]

BLAST of IVF0011249 vs. NCBI nr
Match: XP_038884158.1 (tetrapyrrole-binding protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 450 bits (1158), Expect = 1.60e-158
Identity = 237/258 (91.86%), Postives = 248/258 (96.12%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAAT-SSLSAAAA 60
           MAASHSLPSLR SLR PH PNLSPTSFSSSSTLFLKP STAA TTT TAAT SSLSA+AA
Sbjct: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAAPTTTATAATASSLSASAA 60

Query: 61  GSFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFI 120
           GSFSLS+DTSSAISFDELD LLAAKDFR+ADEETRRLLIALAG+GA KRGYVYFSEVQFI
Sbjct: 61  GSFSLSADTSSAISFDELDHLLAAKDFRQADEETRRLLIALAGEGAQKRGYVYFSEVQFI 120

Query: 121 AAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRA 180
           AA+DLKAID+LWQK+SDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYRA
Sbjct: 121 AADDLKAIDNLWQKYSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA 180

Query: 181 FPTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGL 240
           FPTEFIWELTEETPEGHLPLTNALRGTQLM NIL+HPAFEEDAIEEKGEEK+AGDENGGL
Sbjct: 181 FPTEFIWELTEETPEGHLPLTNALRGTQLMGNILSHPAFEEDAIEEKGEEKVAGDENGGL 240

Query: 241 KKGLKSITERLFKRDYSF 257
           KKGLKSITER+FKRDYSF
Sbjct: 241 KKGLKSITERIFKRDYSF 258

[Close]

BLAST of IVF0011249 vs. NCBI nr
Match: XP_023547651.1 (tetrapyrrole-binding protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399 bits (1025), Expect = 2.81e-138
Identity = 212/260 (81.54%), Postives = 233/260 (89.62%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSST---LFLKPASTAAVTTTTTAATSSLSAA 60
           MAASHSLPSLR +LR PHRPNLSP  FSSSS+   L LK  ST    T   AATSSLSAA
Sbjct: 1   MAASHSLPSLRHTLRRPHRPNLSPNPFSSSSSSSSLLLKSTSTP---TAAIAATSSLSAA 60

Query: 61  AAGSFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQ 120
           AA SFSLSSDTSSA+SFDEL+R LAAK+FR+ADEETRRLLIALAGD A KRGYVYFSEVQ
Sbjct: 61  AASSFSLSSDTSSAVSFDELERHLAAKNFRQADEETRRLLIALAGDAAKKRGYVYFSEVQ 120

Query: 121 FIAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNY 180
           FI++++LKAIDDLWQK+SDGKFGYSVQKR+FEKVN+DFTKLFMKLGWMKKLDTEIEQYNY
Sbjct: 121 FISSDNLKAIDDLWQKYSDGKFGYSVQKRVFEKVNRDFTKLFMKLGWMKKLDTEIEQYNY 180

Query: 181 RAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENG 240
           RAFPTEFIWELTEETPEGHLPLTNALRGTQLM+NILNH AFEEDAIE   +E +AGDENG
Sbjct: 181 RAFPTEFIWELTEETPEGHLPLTNALRGTQLMTNILNHLAFEEDAIEGGAQENVAGDENG 240

Query: 241 GLKKGLKSITERLFKRDYSF 257
           G +KGLK+++ER+FKRDYSF
Sbjct: 241 GFRKGLKTMSERIFKRDYSF 257

[Close]

BLAST of IVF0011249 vs. NCBI nr
Match: XP_022953248.1 (tetrapyrrole-binding protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 399 bits (1024), Expect = 3.71e-138
Identity = 210/257 (81.71%), Postives = 231/257 (89.88%), Query Frame = 0


Query: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60
           MAASHSLPSLR +L  PHRPNLSP  FSSSS L LK  ST   T    AATSSLSAAAA 
Sbjct: 1   MAASHSLPSLRHTLSRPHRPNLSPNPFSSSS-LLLKSTSTPTATAAV-AATSSLSAAAAS 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120
           SFSLSSDTSSA+SFDEL+R LAAK+FR+ADEETRRLLIALAGD A KRGYVYFSEVQF++
Sbjct: 61  SFSLSSDTSSAVSFDELERHLAAKNFRQADEETRRLLIALAGDAAQKRGYVYFSEVQFVS 120

Query: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180
           +++LKAIDDLWQK+SDGKFGYSVQKR+FEKVN+DFTKLFMKLGWMKKLDTEIEQYNYRAF
Sbjct: 121 SDNLKAIDDLWQKYSDGKFGYSVQKRVFEKVNRDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLM+NIL+HPAFEEDAIE   +E +A DENGG K
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMTNILSHPAFEEDAIEGGAQENVAADENGGFK 240

Query: 241 KGLKSITERLFKRDYSF 257
           KGLK+++ER+FKRDYSF
Sbjct: 241 KGLKTMSERIFKRDYSF 255

[Close]

BLAST of IVF0011249 vs. TAIR 10
Match: AT3G59400.1 (enzyme binding;tetrapyrrole binding )

HSP 1 Score: 215.7 bits (548), Expect = 4.4e-56
Identity = 127/254 (50.00%), Postives = 178/254 (70.08%), Query Frame = 0


Query: 12  PSLRHPHRPNLSPTSFSSSSTLFLKPASTAAV------TTTTTAATSSLSAAAAGSFSLS 71
           PS  H HR NL   S    ++L LK  ++AA        ++T+++T+++SA +  + S +
Sbjct: 15  PSYTH-HRNNLHCQSHFGPTSLSLKQPTSAATFSLICSASSTSSSTTAVSAVSTTNASAT 74

Query: 72  SDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIAAEDLK 131
           +  ++ I FD L+  L  ++FR+ADEETRRLLI ++G+ A+KRGYV+FSEV+ I+ EDL+
Sbjct: 75  TAETATI-FDVLENHLVNQNFRQADEETRRLLIQISGEAAVKRGYVFFSEVKTISPEDLQ 134

Query: 132 AIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAFPTEFI 191
           AID+LW KHSDG+FGYSVQ++I+ KV KDFT+ F+K+ WMK LDTE+ QYNYRAFP EF 
Sbjct: 135 AIDNLWIKHSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEVVQYNYRAFPDEFK 194

Query: 192 WELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLKKGLKS 251
           WEL +ETP GHLPLTNALRGTQL+  +L+HPAF   A +  GE +   +    + K    
Sbjct: 195 WELNDETPLGHLPLTNALRGTQLLKCVLSHPAF-ATADDNSGETEDELNRGVAVAKEQAG 254

Query: 252 I--TERLFKRDYSF 258
           +   +R+FK +YSF
Sbjct: 255 VGADKRVFKTNYSF 265

The following BLAST results are available for this feature:

BLAST of IVF0011249 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX31	6.1e-55	50.00	Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=G...	[more]
Q1XDT5	2.3e-25	40.79	Uncharacterized protein ycf53 OS=Pyropia yezoensis OX=2788 GN=ycf53 PE=3 SV=1	[more]
P72583	4.3e-24	39.75	Ycf53-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
P51202	4.0e-22	37.50	Uncharacterized protein ycf53 OS=Porphyra purpurea OX=2787 GN=ycf53 PE=3 SV=1	[more]
O19887	4.4e-21	34.51	Uncharacterized protein ycf53 OS=Cyanidium caldarium OX=2771 GN=ycf53 PE=3 SV=1	[more]

BLAST of IVF0011249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPC7	1.1e-134	100.00	Tetrapyrrole-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BE43	1.1e-134	100.00	tetrapyrrole-binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A0A0KCD2	2.2e-124	93.85	GUN4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042370 PE=4 S...	[more]
A0A6J1GMW2	3.2e-107	81.71	tetrapyrrole-binding protein, chloroplastic-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JPI7	1.2e-106	80.46	tetrapyrrole-binding protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of IVF0011249 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445737.1	3.09e-174	100.00	PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis melo] >KAA003304...	[more]
XP_004140886.1	1.26e-160	93.85	tetrapyrrole-binding protein, chloroplastic [Cucumis sativus] >KGN46002.1 hypoth...	[more]
XP_038884158.1	1.60e-158	91.86	tetrapyrrole-binding protein, chloroplastic [Benincasa hispida]	[more]
XP_023547651.1	2.81e-138	81.54	tetrapyrrole-binding protein, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953248.1	3.71e-138	81.71	tetrapyrrole-binding protein, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of IVF0011249 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59400.1	4.4e-56	50.00	enzyme binding;tetrapyrrole binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008629	GUN4-like	PFAM	PF05419	GUN4	coord: 69..215 e-value: 9.8E-45 score: 152.1
IPR008629	GUN4-like	PANTHER	PTHR34800	TETRAPYRROLE-BINDING PROTEIN, CHLOROPLASTIC	coord: 5..257
IPR008629	GUN4-like	CDD	cd16383	GUN4	coord: 72..213 e-value: 2.18274E-38 score: 129.202
None	No IPR available	GENE3D	1.25.40.620		coord: 20..135 e-value: 3.1E-19 score: 71.8
None	No IPR available	GENE3D	1.10.10.1770		coord: 136..223 e-value: 2.5E-20 score: 74.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
IPR037215	GUN4-like superfamily	SUPERFAMILY	140869	GUN4-like	coord: 70..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011249.2	IVF0011249.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010019	chloroplast-nucleus signaling pathway
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0046906	tetrapyrrole binding