
IVF0011034 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACAAGAAGATATTTTATTTTTTGGGGAATAATAATAAATCAAACGATGGCGATGAAGACGGAAAGAATTAATCACGTTGACCATAAAAAACACCCACCCCATTATTCCCTCTTCACCTTTACTTTCTTCCACTCTTAATCCTCAAAACACATCTTCAACACACAAAACAAAAGAAAAAACAGAGCACACAGAAATGCTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCGCCGCAAAGGTGGTGGAAGACGACGGAACTATCTGCTCCGGCTGCGAATTCCCACTTTCCGGTGCCGCCTACAAGTGCACAAAGCCCAAATGCGAATTCCATCTCCACCAACTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCTCTCATCCTCACTGGATCTCCGCCATACGTCGACGGGGAGTTCGCCTGTGATGGCTGTGATGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCCTTGCCGGAGACGTTGGTCGGGAAAAACCACGATCACCCTCTCCGGCTTGTGTTCGAGTCAAAAGGGAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAGAGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTCGTGGCTGATGATGAGGATGAAGATGAAGAAATGGAGTGATTTTGATGGAGATGAAGATGAAGATGAATTTGGTTGGTCTTTTCTACTCATATTTTGTAATTGTATAGATGAATTTCAGCGTTGTGGAGATTTTGGCCTATATGTATCTTGATCTGCGTTGGATCATGGGTTTTTTCTTATCACATGTTTCTTTTCCAATCAATTTACTCTATCAAAAAGGATGAAGATTAGCTAAAGTTCTCGAATGATAATTCCAAAGTTGAGGGAGTTGTGAACTATTGAAACTCCC TGACAAGAAGATATTTTATTTTTTGGGGAATAATAATAAATCAAACGATGGCGATGAAGACGGAAAGAATTAATCACGTTGACCATAAAAAACACCCACCCCATTATTCCCTCTTCACCTTTACTTTCTTCCACTCTTAATCCTCAAAACACATCTTCAACACACAAAACAAAAGAAAAAACAGAGCACACAGAAATGCTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCGCCGCAAAGGTGGTGGAAGACGACGGAACTATCTGCTCCGGCTGCGAATTCCCACTTTCCGGTGCCGCCTACAAGTGCACAAAGCCCAAATGCGAATTCCATCTCCACCAACTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCTCTCATCCTCACTGGATCTCCGCCATACGTCGACGGGGAGTTCGCCTGTGATGGCTGTGATGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCCTTGCCGGAGACGTTGGTCGGGAAAAACCACGATCACCCTCTCCGGCTTGTGTTCGAGTCAAAAGGGAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAGAGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTCGTGGCTGATGATGAGGATGAAGATGAAGAAATGGAGTGATTTTGATGGAGATGAAGATGAAGATGAATTTGGTTGGTCTTTTCTACTCATATTTTGTAATTGTATAGATGAATTTCAGCGTTGTGGAGATTTTGGCCTATATGTATCTTGATCTGCGTTGGATCATGGGTTTTTTCTTATCACATGTTTCTTTTCCAATCAATTTACTCTATCAAAAAGGATGAAGATTAGCTAAAGTTCTCGAATGATAATTCCAAAGTTGAGGGAGTTGTGAACTATTGAAACTCCC ATGCTAAAGCAACATTTCAGCCACCCCCACCCACTGGCCGCCGCAAAGGTGGTGGAAGACGACGGAACTATCTGCTCCGGCTGCGAATTCCCACTTTCCGGTGCCGCCTACAAGTGCACAAAGCCCAAATGCGAATTCCATCTCCACCAACTCTGTTTCGCCCTCCCACCGGAGATCCACCACCCCTCTCACCCAAAACACCCTCTCATCCTCACTGGATCTCCGCCATACGTCGACGGGGAGTTCGCCTGTGATGGCTGTGATGACGTGGGCTCCGGCTTCATCTACCGGTGCCCACGATGCCAGTTTGATCTACACATCCACTGCGCCGCCTTGCCGGAGACGTTGGTCGGGAAAAACCACGATCACCCTCTCCGGCTTGTGTTCGAGTCAAAAGGGAAAGGATTTTGCTGCGGTGTTTGTGAGGAAGGTTTCGGAAGAGGTGGTTGGGTTTATTACTGCGGGGTTTGTGATTTTGGGGTTCATGTTCACTGTTTCGTGGCTGATGATGAGGATGAAGATGAAGAAATGGAGTGA MLKQHFSHPHPLAAAKVVEDDGTICSGCEFPLSGAAYKCTKPKCEFHLHQLCFALPPEIHHPSHPKHPLILTGSPPYVDGEFACDGCDDVGSGFIYRCPRCQFDLHIHCAALPETLVGKNHDHPLRLVFESKGKGFCCGVCEEGFGRGGWVYYCGVCDFGVHVHCFVADDEDEDEEME Homology
BLAST of IVF0011034 vs. ExPASy Swiss-Prot
Match: Q7Y0E8 (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.1e-08 Identity = 38/118 (32.20%), Postives = 57/118 (48.31%), Query Frame = 0
BLAST of IVF0011034 vs. ExPASy Swiss-Prot
Match: Q7Y0F2 (Probable nucleoredoxin 1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405900 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.8e-06 Identity = 27/81 (33.33%), Postives = 40/81 (49.38%), Query Frame = 0
BLAST of IVF0011034 vs. ExPASy Swiss-Prot
Match: O80763 (Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.1e-05 Identity = 26/83 (31.33%), Postives = 40/83 (48.19%), Query Frame = 0
BLAST of IVF0011034 vs. ExPASy TrEMBL
Match: A0A1S3CGR7 (probable nucleoredoxin 1-1 OS=Cucumis melo OX=3656 GN=LOC103500285 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 8.2e-110 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of IVF0011034 vs. ExPASy TrEMBL
Match: A0A0A0LEY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G705670 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101 Identity = 163/177 (92.09%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of IVF0011034 vs. ExPASy TrEMBL
Match: A0A5A7UBP3 (Putative nucleoredoxin 1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00350 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.4e-95 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0011034 vs. ExPASy TrEMBL
Match: A0A6J1IYQ9 (uncharacterized protein LOC111481877 OS=Cucurbita maxima OX=3661 GN=LOC111481877 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.0e-87 Identity = 144/178 (80.90%), Postives = 151/178 (84.83%), Query Frame = 0
BLAST of IVF0011034 vs. ExPASy TrEMBL
Match: A0A6J1F936 (uncharacterized protein LOC111441955 OS=Cucurbita moschata OX=3662 GN=LOC111441955 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 5.7e-87 Identity = 143/178 (80.34%), Postives = 151/178 (84.83%), Query Frame = 0
BLAST of IVF0011034 vs. NCBI nr
Match: XP_008461757.1 (PREDICTED: probable nucleoredoxin 1-1 [Cucumis melo]) HSP 1 Score: 398 bits (1023), Expect = 1.38e-140 Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0
BLAST of IVF0011034 vs. NCBI nr
Match: XP_004151553.1 (uncharacterized protein LOC101210060 [Cucumis sativus]) HSP 1 Score: 370 bits (951), Expect = 1.38e-129 Identity = 163/177 (92.09%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of IVF0011034 vs. NCBI nr
Match: KAA0052804.1 (putative nucleoredoxin 1-1 [Cucumis melo var. makuwa] >TYK04164.1 putative nucleoredoxin 1-1 [Cucumis melo var. makuwa]) HSP 1 Score: 349 bits (896), Expect = 2.63e-121 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0011034 vs. NCBI nr
Match: XP_038905399.1 (uncharacterized protein LOC120091443 [Benincasa hispida]) HSP 1 Score: 341 bits (875), Expect = 4.82e-118 Identity = 155/178 (87.08%), Postives = 158/178 (88.76%), Query Frame = 0
BLAST of IVF0011034 vs. NCBI nr
Match: XP_023528190.1 (uncharacterized protein LOC111791179 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 328 bits (841), Expect = 7.90e-113 Identity = 146/178 (82.02%), Postives = 152/178 (85.39%), Query Frame = 0
BLAST of IVF0011034 vs. TAIR 10
Match: AT2G44380.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 189.5 bits (480), Expect = 2.3e-48 Identity = 83/179 (46.37%), Postives = 111/179 (62.01%), Query Frame = 0
BLAST of IVF0011034 vs. TAIR 10
Match: AT2G17740.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 185.7 bits (470), Expect = 3.3e-47 Identity = 80/176 (45.45%), Postives = 111/176 (63.07%), Query Frame = 0
BLAST of IVF0011034 vs. TAIR 10
Match: AT2G44370.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 185.7 bits (470), Expect = 3.3e-47 Identity = 83/177 (46.89%), Postives = 113/177 (63.84%), Query Frame = 0
BLAST of IVF0011034 vs. TAIR 10
Match: AT5G43520.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 184.1 bits (466), Expect = 9.7e-47 Identity = 84/186 (45.16%), Postives = 111/186 (59.68%), Query Frame = 0
BLAST of IVF0011034 vs. TAIR 10
Match: AT2G28270.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 179.9 bits (455), Expect = 1.8e-45 Identity = 78/175 (44.57%), Postives = 104/175 (59.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|