IVF0011024 (gene) Melon (IVF77) v1

Overview


Name	IVF0011024
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein RADIALIS-like 1
Location	chr01: 16540114 .. 16540992 (-)
RNA-Seq Expression	IVF0011024
Synteny	IVF0011024

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACTTTTCACCTTGCAAAATAAGACTTTTTTAGTCCTTTCTGTTTTCTCCCACTCTTTAATTATTTTTAACTTTTTTTCCCCTCACTTCAAACCCTTTGAAGGATTCCTTTTTATTTTGTCGAATGGCTTCCATGACTGCTCATGGACCAAGCACTCCATGGACTGCAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAAAGATGGCTGAATGTTGCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAATCTGGTGAAATTCCTTTTCCTTATCGAAGATTAACGTGATCAAGTAATTAAGTGTTAATGAAACAAGGTAATATACATTGTTAAATCACTCTTGAACTCAAAAGGTGCTGCATTCTAGACAGTCATTCCATGCAAGTTCATAATGAAGTTTTTGTGATATTATGCTCTAAAAATCTCTCTTTCTAATTTTTTTTCTCTAGACTTTATAATGTAAAAAGTTTGAATTTGTATATGGTAATTATATATAATACCAAATAATGAAGCATTTTATTGTTCATACATATTTATCATTAAAAGACTTTAACATAATATCTCTCATTTTTCCTTTGTTTTTACCAGGATGATTAAGTGAGCCAGCTCCTTCAGTGGTTTGAAGAATAGAAGAAGAAGAAAACCATATTATGTTTGTCTTTTTGTGCCCATTTAAAGTGTAATTGTAATTTTTTGAATGGAATAAAGGATTATTTGCTTGCTGTTAATTTCCTTCTAATCAGAACCATCCATCTTCCGTTTTTTTTTTCTCGTTTTTACTTAAATTTAACATTTGTGTGCTGATT

mRNA sequence

ATACTTTTCACCTTGCAAAATAAGACTTTTTTAGTCCTTTCTGTTTTCTCCCACTCTTTAATTATTTTTAACTTTTTTTCCCCTCACTTCAAACCCTTTGAAGGATTCCTTTTTATTTTGTCGAATGGCTTCCATGACTGCTCATGGACCAAGCACTCCATGGACTGCAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAAAGATGGCTGAATGTTGCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAATCTGGTGAAATTCCTTTTCCTTATCGAAGATTAACGTGATCAAGTAATTAAGTGTTAATGAAACAAGGATGATTAAGTGAGCCAGCTCCTTCAGTGGTTTGAAGAATAGAAGAAGAAGAAAACCATATTATGTTTGTCTTTTTGTGCCCATTTAAAGTGTAATTGTAATTTTTTGAATGGAATAAAGGATTATTTGCTTGCTGTTAATTTCCTTCTAATCAGAACCATCCATCTTCCGTTTTTTTTTTCTCGTTTTTACTTAAATTTAACATTTGTGTGCTGATT

Coding sequence (CDS)

ATGGCTTCCATGACTGCTCATGGACCAAGCACTCCATGGACTGCAAAGCAAAACAAAGCATTTGAGAAAGCTTTGGCAGTTTATGATAAAGACACACCTGAAAGATGGCTGAATGTTGCGAAGGCCATTGGTGGGAAAACTGAAGAAGAAGTGAAAAGGCATTATCAACTTCTTGTGGAGGATGTTAAGCATATTGAATCTGGTGAAATTCCTTTTCCTTATCGAAGATTAACGTGA

Protein sequence

MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEIPFPYRRLT

Homology

[Close]

BLAST of IVF0011024 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-24
Identity = 48/74 (64.86%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 5  TAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKH 64
          +  G   PW+AK+NKAFE+ALAVYDKDTP+RW NVA+A+ G+T EEVK+HY++LVED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGEIPFPYRRLT 79
          IESG++PFP  R T
Sbjct: 63 IESGKVPFPNYRTT 76

[Close]

BLAST of IVF0011024 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-22
Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1  MASMTAHGPST-PWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLV 60
          MAS +    S+  WTAKQNKAFE+ALA YD+DTP RW NVAK +GGKT EEVKRHY+LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGEIPFPYRR 77
          +D+  IE+G +PFP  R
Sbjct: 61 QDINSIENGHVPFPNYR 77

[Close]

BLAST of IVF0011024 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-21
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 3  SMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 62
          SM+++G S  WT KQNKAFE+ALAVYD+DTP+RW NVA+A+GGKT EE KR Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGEIPFPYRRLT 79
          + IE+G +PFP  + T
Sbjct: 65 ESIENGHVPFPDYKTT 79

[Close]

BLAST of IVF0011024 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-21
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYDKDTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of IVF0011024 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.7e-20
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 10 STPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGE 69
          S+ WT+KQNK FE+ALAVYDKDTP+RW NVAKA+G K+ EEVKRHY +LVED+ +IE   
Sbjct: 9  SSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDL 68

Query: 70 IPFP 74
          +P P
Sbjct: 69 VPLP 72

[Close]

BLAST of IVF0011024 vs. ExPASy TrEMBL
Match: A0A5A7T3V4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00070 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.4e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPYRRLT 79
          DVKHIESGEIPFPYRRLT
Sbjct: 61 DVKHIESGEIPFPYRRLT 78

[Close]

BLAST of IVF0011024 vs. ExPASy TrEMBL
Match: A0A0A0K3K0 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 66/78 (84.62%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG S+ WTA +NKAFEKALA+YDKDTPERWLNVAKAIGGKTEEEVKRHYQLL+E
Sbjct: 1  MASMSAHG-SSAWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYRRLT 79
          DV HIESG+IPFPYR+ T
Sbjct: 61 DVNHIESGQIPFPYRKST 77

[Close]

BLAST of IVF0011024 vs. ExPASy TrEMBL
Match: A0A6J1GKK4 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 65/76 (85.53%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG +  WTAKQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVKRHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGEIPFPYRR 77
          DVK IESGE+PFPY R
Sbjct: 61 DVKQIESGEVPFPYGR 76

[Close]

BLAST of IVF0011024 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-29
Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG S  WTAKQNKAFEKALA+YDKDTP+RWLNVAKAIGGKTEEEVKRHYQLL+E
Sbjct: 1  MASMSAHG-SGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYR 76
          DVKHIESG++PFPYR
Sbjct: 61 DVKHIESGKVPFPYR 74

[Close]

BLAST of IVF0011024 vs. ExPASy TrEMBL
Match: A0A1S3BGF0 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.1e-29
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG ST WTA +NKAFEKALA+YDKDTPERWLNVAKAIGGKTEE+VKRHYQLL+E
Sbjct: 1  MASMSAHG-STQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYRRLT 79
          DV HIE+G+IPFPYR  T
Sbjct: 61 DVNHIENGQIPFPYRNST 77

[Close]

BLAST of IVF0011024 vs. NCBI nr
Match: KAA0036165.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 163 bits (412), Expect = 1.31e-50
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE
Sbjct: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60

Query: 61 DVKHIESGEIPFPYRRLT 78
          DVKHIESGEIPFPYRRLT
Sbjct: 61 DVKHIESGEIPFPYRRLT 78

[Close]

BLAST of IVF0011024 vs. NCBI nr
Match: KAE8645640.1 (hypothetical protein Csa_020521 [Cucumis sativus])

HSP 1 Score: 151 bits (382), Expect = 5.58e-46
Identity = 73/78 (93.59%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASMTAHGPST WT  QNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVK HYQLLVE
Sbjct: 1  MASMTAHGPSTTWTINQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKSHYQLLVE 60

Query: 61 DVKHIESGEIPFPYRRLT 78
          DVKHIESGEIPFPYRR T
Sbjct: 61 DVKHIESGEIPFPYRRST 78

[Close]

BLAST of IVF0011024 vs. NCBI nr
Match: XP_022952074.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572044.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011711.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137 bits (345), Expect = 2.20e-40
Identity = 65/76 (85.53%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG +  WTAKQNKAFEKALAVYD+DTPERWLNVAKAIGGKTEEEVKRHYQLL++
Sbjct: 1  MASMSAHGSAGSWTAKQNKAFEKALAVYDQDTPERWLNVAKAIGGKTEEEVKRHYQLLLK 60

Query: 61 DVKHIESGEIPFPYRR 76
          DVK IESGE+PFPY R
Sbjct: 61 DVKQIESGEVPFPYGR 76

[Close]

BLAST of IVF0011024 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 137 bits (344), Expect = 3.22e-40
Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG S  WTAKQNKAFEKALA+YDKDTP+RWLNVAKAIGGKTEEEVKRHYQLL+E
Sbjct: 1  MASMSAHG-SGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYR 75
          DVKHIESG++PFPYR
Sbjct: 61 DVKHIESGKVPFPYR 74

[Close]

BLAST of IVF0011024 vs. NCBI nr
Match: XP_008447026.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 135 bits (341), Expect = 9.78e-40
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 1  MASMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVE 60
          MASM+AHG ST WTA +NKAFEKALA+YDKDTPERWLNVAKAIGGKTEE+VKRHYQLL+E
Sbjct: 1  MASMSAHG-STQWTAIENKAFEKALAIYDKDTPERWLNVAKAIGGKTEEDVKRHYQLLLE 60

Query: 61 DVKHIESGEIPFPYRRLT 78
          DV HIE+G+IPFPYR  T
Sbjct: 61 DVNHIENGQIPFPYRNST 77

[Close]

BLAST of IVF0011024 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 105.5 bits (262), Expect = 1.9e-23
Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1  MASMTAHGPST-PWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLV 60
          MAS +    S+  WTAKQNKAFE+ALA YD+DTP RW NVAK +GGKT EEVKRHY+LLV
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLV 60

Query: 61 EDVKHIESGEIPFPYRR 77
          +D+  IE+G +PFP  R
Sbjct: 61 QDINSIENGHVPFPNYR 77

[Close]

BLAST of IVF0011024 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 7.3e-23
Identity = 48/76 (63.16%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 3  SMTAHGPSTPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDV 62
          SM+++G S  WT KQNKAFE+ALAVYD+DTP+RW NVA+A+GGKT EE KR Y LLV D+
Sbjct: 5  SMSSYG-SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDI 64

Query: 63 KHIESGEIPFPYRRLT 79
          + IE+G +PFP  + T
Sbjct: 65 ESIENGHVPFPDYKTT 79

[Close]

BLAST of IVF0011024 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYDKDTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of IVF0011024 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 102.8 bits (255), Expect = 1.2e-22
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 11 TPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGEI 70
          +PWT  QNK FE+ALAVYDKDTP+RW NVAKA+GGKT EEVKRHY +LVED+ +IE+G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query: 71 PFP 74
          P P
Sbjct: 70 PLP 72

[Close]

BLAST of IVF0011024 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 97.8 bits (242), Expect = 4.0e-21
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 10 STPWTAKQNKAFEKALAVYDKDTPERWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGE 69
          S+ WT+KQNK FE+ALAVYDKDTP+RW NVAKA+G K+ EEVKRHY +LVED+ +IE   
Sbjct: 9  SSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDL 68

Query: 70 IPFP 74
          +P P
Sbjct: 69 VPLP 72

The following BLAST results are available for this feature:

BLAST of IVF0011024 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q58FS3	1.3e-24	64.86	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
F4JVB8	2.7e-22	64.94	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	1.0e-21	63.16	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q1A173	1.8e-21	71.43	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q8GW75	5.7e-20	67.19	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]

BLAST of IVF0011024 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3V4	2.4e-37	100.00	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K3K0	1.4e-29	84.62	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G168060 PE=4 S...	[more]
A0A6J1GKK4	1.4e-29	85.53	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454836 PE=4 SV=1	[more]
A0A1S3BGF6	1.8e-29	88.00	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]
A0A1S3BGF0	4.1e-29	83.33	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489577 PE=4 SV=1	[more]

BLAST of IVF0011024 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036165.1	1.31e-50	100.00	protein RADIALIS-like 1 [Cucumis melo var. makuwa] >TYK19711.1 protein RADIALIS-...	[more]
KAE8645640.1	5.58e-46	93.59	hypothetical protein Csa_020521 [Cucumis sativus]	[more]
XP_022952074.1	2.20e-40	85.53	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511408.1 protein RADIALIS-li...	[more]
XP_008447025.1	3.22e-40	88.00	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
XP_008447026.1	9.78e-40	83.33	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]

BLAST of IVF0011024 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	1.9e-23	64.94	RAD-like 1	[more]
AT2G21650.1	7.3e-23	63.16	Homeodomain-like superfamily protein	[more]
AT1G75250.1	1.2e-22	71.43	RAD-like 6	[more]
AT1G75250.2	1.2e-22	71.43	RAD-like 6	[more]
AT1G19510.1	4.0e-21	67.19	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..61 e-value: 2.5E-7 score: 40.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 12..59 score: 6.132755
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..59 e-value: 7.98177E-7 score: 39.481
None	No IPR available	GENE3D	1.10.10.60		coord: 5..72 e-value: 8.6E-24 score: 85.1
None	No IPR available	PANTHER	PTHR43952:SF74	PROTEIN RADIALIS-LIKE 2	coord: 5..75
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 12..57 e-value: 1.0E-5 score: 25.6
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 5..75
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011024.2	IVF0011024.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity