IVF0010845 (gene) Melon (IVF77) v1

Overview
NameIVF0010845
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSenescence-associated protein
Locationchr01: 21418482 .. 21418706 (-)
RNA-Seq ExpressionIVF0010845
SyntenyIVF0010845
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCCTACCTTCACAACAATCCCGTATGGGGAGAGTTGTGTGGTGGGGGCAAAGATGCGTGACGCCCAAGCAAACGTGCCCTCGGCCAAAACGCTCTGGGTGCAACTTGTGTTTAAAGATTCGTTGGTTTGCGGGATCCTGCAATTCGCACCAAGTATCGTATTTAGTTACGTTCTTCATCGATGCAAGAGCTTAGATATTTGTTACCAAGAGTCATTGTGA

mRNA sequence

ATGCCCCCTACCTTCACAACAATCCCGTATGGGGAGAGTTGTGTGGTGGGGGCAAAGATGCGTGACGCCCAAGCAAACGTGCCCTCGGCCAAAACGCTCTGGGTGCAACTTGTGTTTAAAGATTCGTTGGTTTGCGGGATCCTGCAATTCGCACCAAGTATCGTATTTAGTTACGTTCTTCATCGATGCAAGAGCTTAGATATTTGTTACCAAGAGTCATTGTGA

Coding sequence (CDS)

ATGCCCCCTACCTTCACAACAATCCCGTATGGGGAGAGTTGTGTGGTGGGGGCAAAGATGCGTGACGCCCAAGCAAACGTGCCCTCGGCCAAAACGCTCTGGGTGCAACTTGTGTTTAAAGATTCGTTGGTTTGCGGGATCCTGCAATTCGCACCAAGTATCGTATTTAGTTACGTTCTTCATCGATGCAAGAGCTTAGATATTTGTTACCAAGAGTCATTGTGA

Protein sequence

MPPTFTTIPYGESCVVGAKMRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKSLDICYQESL
Homology
BLAST of IVF0010845 vs. ExPASy TrEMBL
Match: A0A6A1WDF0 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G003178 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 43/68 (63.24%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 9   PYGESCV---VGAKMRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKS 68
           P   SC    VGA MRD QA+VPSAK LW QL FK+S++ GILQF PSI F YVLHRC+S
Sbjct: 380 PRNPSCEVFGVGATMRDTQADVPSAKRLWAQLAFKNSMIRGILQFTPSIAFRYVLHRCES 439

Query: 69  LDICYQES 74
            DI  +ES
Sbjct: 440 RDIRCRES 447

BLAST of IVF0010845 vs. ExPASy TrEMBL
Match: A0A6A1VJA4 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G025803 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 43/68 (63.24%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 9   PYGESCV---VGAKMRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKS 68
           P   SC    VGA MRD QA+VPSAK LW QL FK+S++ GILQF PSI F YVLHRC+S
Sbjct: 638 PRNPSCEVFGVGATMRDTQADVPSAKRLWAQLAFKNSMIRGILQFTPSIAFRYVLHRCES 697

Query: 69  LDICYQES 74
            DI  +ES
Sbjct: 698 RDIRCRES 705

BLAST of IVF0010845 vs. ExPASy TrEMBL
Match: A0A2G2V0P4 (Protein TAR1 OS=Capsicum baccatum OX=33114 GN=CQW23_33932 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 20 MRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKSLDICYQES 74
          MRDAQA+VPSAK L  QL FKDS+V GILQF PSI F  VLHRC+S DIC +ES
Sbjct: 7  MRDAQADVPSAKWLRAQLAFKDSMVHGILQFTPSIAFRNVLHRCESRDICCRES 60

BLAST of IVF0010845 vs. ExPASy TrEMBL
Match: A0A7N2RFC1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-11
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0

Query: 17  GAKMRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKSLDICYQES 74
           GA MRD QA+VPSA+ L  QL FK+S++ GILQF PSI F YVLHRC+SLDI  +ES
Sbjct: 291 GATMRDTQADVPSAEWLRAQLAFKNSMIRGILQFTPSIAFRYVLHRCESLDIRCRES 347

BLAST of IVF0010845 vs. ExPASy TrEMBL
Match: A0A2G2UY24 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34715 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.6e-11
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 20 MRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKSLDICYQES 74
          MRDAQA+VPSAK L  QL FKDS+V GILQF PSI F YVLHRC+S DI  +ES
Sbjct: 1  MRDAQADVPSAKWLRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRDIRCRES 54

BLAST of IVF0010845 vs. NCBI nr
Match: KAB1223221.1 (hypothetical protein CJ030_MR2G003178 [Morella rubra])

HSP 1 Score: 84.0 bits (206), Expect = 9.68e-17
Identity = 43/68 (63.24%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 9   PYGESCVV---GAKMRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKS 68
           P   SC V   GA MRD QA+VPSAK LW QL FK+S++ GILQF PSI F YVLHRC+S
Sbjct: 380 PRNPSCEVFGVGATMRDTQADVPSAKRLWAQLAFKNSMIRGILQFTPSIAFRYVLHRCES 439

Query: 69  LDICYQES 73
            DI  +ES
Sbjct: 440 RDIRCRES 447

BLAST of IVF0010845 vs. NCBI nr
Match: KAB1212992.1 (putative uncharacterized protein ART2, partial [Morella rubra])

HSP 1 Score: 84.0 bits (206), Expect = 9.90e-17
Identity = 43/68 (63.24%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 9   PYGESCVV---GAKMRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKS 68
           P   SC V   GA MRD QA+VPSAK LW QL FK+S++ GILQF PSI F YVLHRC+S
Sbjct: 638 PRNPSCEVFGVGATMRDTQADVPSAKRLWAQLAFKNSMIRGILQFTPSIAFRYVLHRCES 697

Query: 69  LDICYQES 73
            DI  +ES
Sbjct: 698 RDIRCRES 705

BLAST of IVF0010845 vs. NCBI nr
Match: GGI43508.1 (hypothetical protein GCM10010896_23760 [Mammaliicoccus stepanovicii])

HSP 1 Score: 76.6 bits (187), Expect = 2.69e-16
Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = 0

Query: 17 GAKMRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKSLDICYQES 73
          G  MRDAQA VPSA+ L  QL FKDS+V GILQF PSI F YVLHRC+S DI  +ES
Sbjct: 27 GDAMRDAQAGVPSARRLRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRDIRCRES 83

BLAST of IVF0010845 vs. NCBI nr
Match: KAG6384451.1 (hypothetical protein SASPL_155737 [Salvia splendens])

HSP 1 Score: 81.6 bits (200), Expect = 6.43e-16
Identity = 42/58 (72.41%), Postives = 46/58 (79.31%), Query Frame = 0

Query: 16  VGAKMRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKSLDICYQES 73
           VGA MRDAQA+VPSAK L  QL FKDS+V GILQF PSI F YVLHRC+S DI  +ES
Sbjct: 322 VGATMRDAQADVPSAKWLRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRDIRCRES 379

BLAST of IVF0010845 vs. NCBI nr
Match: PHT25661.1 (hypothetical protein CQW23_34715 [Capsicum baccatum])

HSP 1 Score: 76.6 bits (187), Expect = 2.88e-15
Identity = 39/54 (72.22%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 20 MRDAQANVPSAKTLWVQLVFKDSLVCGILQFAPSIVFSYVLHRCKSLDICYQES 73
          MRDAQA+VPSAK L  QL FKDS+V GILQF PSI F YVLHRC+S DI  +ES
Sbjct: 1  MRDAQADVPSAKWLRAQLAFKDSMVHGILQFTPSIAFRYVLHRCESRDIRCRES 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6A1WDF02.3e-1363.24Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G003178 PE=4 SV=1[more]
A0A6A1VJA42.3e-1363.24Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G025803 PE=4 SV=1[more]
A0A2G2V0P41.6e-1172.22Protein TAR1 OS=Capsicum baccatum OX=33114 GN=CQW23_33932 PE=4 SV=1[more]
A0A7N2RFC12.8e-1166.67Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A2G2UY243.6e-1172.22Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34715 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAB1223221.19.68e-1763.24hypothetical protein CJ030_MR2G003178 [Morella rubra][more]
KAB1212992.19.90e-1763.24putative uncharacterized protein ART2, partial [Morella rubra][more]
GGI43508.12.69e-1668.42hypothetical protein GCM10010896_23760 [Mammaliicoccus stepanovicii][more]
KAG6384451.16.43e-1672.41hypothetical protein SASPL_155737 [Salvia splendens][more]
PHT25661.12.88e-1572.22hypothetical protein CQW23_34715 [Capsicum baccatum][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010845.2IVF0010845.2mRNA