IVF0010809 (gene) Melon (IVF77) v1

Overview


Name	IVF0010809
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr06: 8857295 .. 8857715 (+)
RNA-Seq Expression	IVF0010809
Synteny	IVF0010809

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGCGGCTCAATCAAAGAAAAACGACTTACGGCTTGGGTTTGAGGCAGAAACACGTGGGTTGGCTCGTGGTTGAAGGGTGGCTTGCTGCTATTGGCTCGTTTGGCGATCGGCTCTGTAAGATGTGGCTCGGCTGGATGGAAGCTCGCAAGCAGCTGGAGAAAAGAAGACGGCTAGCATACGTAGACACGTGGCTCGACTGGACGGCTGACAATCGCTTGGTCAGGTTGAGGAAGAACGTGTAGACGACGGTGAACAACGGAGAGAGGCACCGACGCGCAGTTTCATTGGGCTTCGTTGATGAGAAATGCAGTGGTTCAGGTCGGTTCACACGAGGGGATGGTGCGACTGCCAACAACTTTGTCAGAGAGGGGATTGGCAGAGAGAGCTGGCGGGGACGGCGGACTCGTGGAGTAA

mRNA sequence

ATGGCTTGGCGGCTCAATCAAAGAAAAACGACTTACGGCTTGGGTTTGAGGCAGAAACACGTGGGTTGGCTCGTGGTTGAAGGGTGGCTTGCTGCTATTGGCTCGTTTGGCGATCGGCTCTGTAAGATGTGGCTCGGCTGGATGGAAGCTCGCAAGCAGCTGGAGAAAAGAAGACGGCTAGTTGAGGAAGAACGTGTAGACGACGGTGAACAACGGAGAGAGGCACCGACGCGCATGGTTCAGGTCGGTTCACACGAGGGGATGGTGCGACTGCCAACAACTTTGTCAGAGAGGGGATTGGCAGAGAGAGCTGGCGGGGACGGCGGACTCGTGGAGTAA

Coding sequence (CDS)

ATGGCTTGGCGGCTCAATCAAAGAAAAACGACTTACGGCTTGGGTTTGAGGCAGAAACACGTGGGTTGGCTCGTGGTTGAAGGGTGGCTTGCTGCTATTGGCTCGTTTGGCGATCGGCTCTGTAAGATGTGGCTCGGCTGGATGGAAGCTCGCAAGCAGCTGGAGAAAAGAAGACGGCTAGTTGAGGAAGAACGTGTAGACGACGGTGAACAACGGAGAGAGGCACCGACGCGCATGGTTCAGGTCGGTTCACACGAGGGGATGGTGCGACTGCCAACAACTTTGTCAGAGAGGGGATTGGCAGAGAGAGCTGGCGGGGACGGCGGACTCGTGGAGTAA

Protein sequence

MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRLVEEERVDDGEQRREAPTRMVQVGSHEGMVRLPTTLSERGLAERAGGDGGLVE

Homology

[Close]

BLAST of IVF0010809 vs. ExPASy TrEMBL
Match: A0A5A7SNJ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold428G00080 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.6e-48
Identity = 106/140 (75.71%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 1   MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRL 60
           MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRL
Sbjct: 1   MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRL 60

Query: 61  -----------------VEEERVDDGEQRREAPTR-----------MVQVGSHEGMVRLP 113
                            + +  VDDGEQRREAPTR           +VQVGSHEGMVRLP
Sbjct: 61  AYVDTWLDWTADNRLVRLRKNGVDDGEQRREAPTRSFIGLRWMRNAVVQVGSHEGMVRLP 120

[Close]

BLAST of IVF0010809 vs. NCBI nr
Match: KAA0032764.1 (hypothetical protein E6C27_scaffold708G00080 [Cucumis melo var. makuwa] >TYK23932.1 hypothetical protein E5676_scaffold428G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (501), Expect = 1.00e-62
Identity = 106/140 (75.71%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 1   MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRL 60
           MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRL
Sbjct: 1   MAWRLNQRKTTYGLGLRQKHVGWLVVEGWLAAIGSFGDRLCKMWLGWMEARKQLEKRRRL 60

Query: 61  -----------------VEEERVDDGEQRREAPTR-----------MVQVGSHEGMVRLP 112
                            + +  VDDGEQRREAPTR           +VQVGSHEGMVRLP
Sbjct: 61  AYVDTWLDWTADNRLVRLRKNGVDDGEQRREAPTRSFIGLRWMRNAVVQVGSHEGMVRLP 120

The following BLAST results are available for this feature:

BLAST of IVF0010809 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0010809 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNJ4	9.6e-48	75.71	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0010809 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032764.1	1.00e-62	75.71	hypothetical protein E6C27_scaffold708G00080 [Cucumis melo var. makuwa] >TYK2393...	[more]

BLAST of IVF0010809 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010809.1	IVF0010809.1	mRNA