IVF0010617 (gene) Melon (IVF77) v1

Overview
NameIVF0010617
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 13000778 .. 13000945 (-)
RNA-Seq ExpressionIVF0010617
SyntenyIVF0010617
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACTGGCCGAAGGCCTAGGCGGAGTAGAAGACTTTGTGGGAGATTCAATTCGTATGTCAGATGATCTTCATCTGAATCGGGTTACCGTGGTAAACTCTAAATTCATAGCATATTCATCTGCACTCATTGATGAAGGTGTAGAGTTTGAAGAAGAAGATGGATGA

mRNA sequence

ATGAGACTGGCCGAAGGCCTAGGCGGAGTAGAAGACTTTGTGGGAGATTCAATTCGTATGTCAGATGATCTTCATCTGAATCGGGTTACCGTGGTAAACTCTAAATTCATAGCATATTCATCTGCACTCATTGATGAAGGTGTAGAGTTTGAAGAAGAAGATGGATGA

Coding sequence (CDS)

ATGAGACTGGCCGAAGGCCTAGGCGGAGTAGAAGACTTTGTGGGAGATTCAATTCGTATGTCAGATGATCTTCATCTGAATCGGGTTACCGTGGTAAACTCTAAATTCATAGCATATTCATCTGCACTCATTGATGAAGGTGTAGAGTTTGAAGAAGAAGATGGATGA

Protein sequence

MRLAEGLGGVEDFVGDSIRMSDDLHLNRVTVVNSKFIAYSSALIDEGVEFEEEDG
Homology
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BLAST of IVF0010617 vs. NCBI nr
Match: TYK05203.1 (hypothetical protein E5676_scaffold108G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 46.6 bits (109), Expect = 2.44e-04
Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 1  MRLAEGLGGVEDFVGDSIRMSDDLHLNRVTVV 32
          MRL EGLGGV+D VGD IR+ D+L L+RVT++
Sbjct: 1  MRLVEGLGGVDDSVGDPIRILDNLDLDRVTMI 32

The following BLAST results are available for this feature:
BLAST of IVF0010617 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0010617 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0010617 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK05203.12.44e-0465.63hypothetical protein E5676_scaffold108G00030 [Cucumis melo var. makuwa][more]
BLAST of IVF0010617 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0010617.1IVF0010617.1mRNA