IVF0010377 (gene) Melon (IVF77) v1

Overview


Name	IVF0010377
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Nodulin homeobox isoform X2
Location	chr10: 25729418 .. 25729957 (-)
RNA-Seq Expression	IVF0010377
Synteny	IVF0010377

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGGCCGAACAATAGGAAAGCGAGGCTAGCACGCACAGCTAGGGATAGGCGTGCAACCTTAGAAGCTGACAATGCAATTCCAGATAAGCAAGGGGGTATGGCAGCTGGATCCTGTGATTCACCTGATAGCCAATGTGAAGATAAAAATGTACATAATATAGGAAGGGATCGAAGAACTGCATCAAGAACTAACACGACTAATAATTCTAAGAATTCAACAATGAAGTTCAATGACAGTGGCCCAACAGAACTTGTTCACTTCAAGCCACGACTGTATGTCATTCTTATAGACGTGCTCGGAGAGGAGATTGTGAAAGGAAAAGTGCATCAGGTACATGGTAAATGGTATGGGAGAAACCTGGAGGAATTTGAAACATTAGTTGTTGATATTGATGAATTGAAGACTGATAAAAACACAGTGCTTCCATACCCACACGAGGACACATGCACCTTATTCCATGAGGCAGAAACTAAAATTGGTGTTATGAGAGTTTTGTGGGATTTTAACAAAATCTTCATGTTAAAGTCACAATGA

mRNA sequence

ATGAACAGGCCGAACAATAGGAAAGCGAGGCTAGCACGCACAGCTAGGGATAGGCGTGCAACCTTAGAAGCTGACAATGCAATTCCAGATAAGCAAGGGGGTATGGCAGCTGGATCCTGTGATTCACCTGATAGCCAATGTGAAGATAAAAATGTACATAATATAGGAAGGGATCGAAGAACTGCATCAAGAACTAACACGACTAATAATTCTAAGAATTCAACAATGAAGTTCAATGACAGTGGCCCAACAGAACTTGTTCACTTCAAGCCACGACTGTATGTCATTCTTATAGACGTGCTCGGAGAGGAGATTGTGAAAGGAAAAGTGCATCAGGTACATGGTAAATGGTATGGGAGAAACCTGGAGGAATTTGAAACATTAGTTGTTGATATTGATGAATTGAAGACTGATAAAAACACAGTGCTTCCATACCCACACGAGGACACATGCACCTTATTCCATGAGGCAGAAACTAAAATTGGTGTTATGAGAGTTTTGTGGGATTTTAACAAAATCTTCATGTTAAAGTCACAATGA

Coding sequence (CDS)

ATGAACAGGCCGAACAATAGGAAAGCGAGGCTAGCACGCACAGCTAGGGATAGGCGTGCAACCTTAGAAGCTGACAATGCAATTCCAGATAAGCAAGGGGGTATGGCAGCTGGATCCTGTGATTCACCTGATAGCCAATGTGAAGATAAAAATGTACATAATATAGGAAGGGATCGAAGAACTGCATCAAGAACTAACACGACTAATAATTCTAAGAATTCAACAATGAAGTTCAATGACAGTGGCCCAACAGAACTTGTTCACTTCAAGCCACGACTGTATGTCATTCTTATAGACGTGCTCGGAGAGGAGATTGTGAAAGGAAAAGTGCATCAGGTACATGGTAAATGGTATGGGAGAAACCTGGAGGAATTTGAAACATTAGTTGTTGATATTGATGAATTGAAGACTGATAAAAACACAGTGCTTCCATACCCACACGAGGACACATGCACCTTATTCCATGAGGCAGAAACTAAAATTGGTGTTATGAGAGTTTTGTGGGATTTTAACAAAATCTTCATGTTAAAGTCACAATGA

Protein sequence

MNRPNNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEEFETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ

Homology

[Close]

BLAST of IVF0010377 vs. ExPASy Swiss-Prot
Match: F4JI44 (Nodulin homeobox OS=Arabidopsis thaliana OX=3702 GN=NDX PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08
Identity = 52/174 (29.89%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNA--IPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTA 64
           NNRKA+LAR  +      + +++  +P+  G         P +  +D          +T 
Sbjct: 755 NNRKAKLARANKQTGPAHDNNSSGDLPESPGDENTWQ-QKPSTPIKD----------QTV 814

Query: 65  SRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNL 124
           + T  T  +   T   ++ G       K    V L+D  G+EI KG V +  G+W G +L
Sbjct: 815 TETPKTGENLMRTSSSSEEG------IKQGQQVRLMDERGDEIGKGTVLRTDGEWNGLSL 874

Query: 125 EEFETLVVDIDELKTD---KNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKI 174
           E  +  VVD+ EL         ++PY  +D    F EA ++ GVMRV WD NK+
Sbjct: 875 ETRQICVVDVMELSESYDGSKKMIPYGSDDVGRTFTEANSRFGVMRVAWDVNKL 911

[Close]

BLAST of IVF0010377 vs. ExPASy TrEMBL
Match: A0A5A7UKY3 (Nodulin homeobox isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G001380 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MNRPNNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRR 60
           MNRPNNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRR
Sbjct: 1   MNRPNNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRR 60

Query: 61  TASRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGR 120
           TASRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGR
Sbjct: 61  TASRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGR 120

Query: 121 NLEEFETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 180
           NLEEFETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ
Sbjct: 121 NLEEFETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 179

[Close]

BLAST of IVF0010377 vs. ExPASy TrEMBL
Match: A0A0A0LVA2 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G502860 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 153/175 (87.43%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASR 64
           NNRKARLARTARD RATLEADNAIPDKQGGM AGSCDSPDS CEDK+V N GRDRR+ASR
Sbjct: 758 NNRKARLARTARDSRATLEADNAIPDKQGGMTAGSCDSPDSPCEDKHVPNTGRDRRSASR 817

Query: 65  TNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEE 124
           TNT NNSKNST +FNDSGPTE VHFKP  YVIL+DVLGEEI KGKVHQVHGKWYGRNLEE
Sbjct: 818 TNTANNSKNSTTEFNDSGPTEFVHFKPGQYVILVDVLGEEIAKGKVHQVHGKWYGRNLEE 877

Query: 125 FETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 180
            ETLVVDIDELK DKNTVLPYP+E T T FHEAETKIGVMRVLWDFNKIFML+SQ
Sbjct: 878 LETLVVDIDELKADKNTVLPYPYEATGTSFHEAETKIGVMRVLWDFNKIFMLQSQ 932

[Close]

BLAST of IVF0010377 vs. ExPASy TrEMBL
Match: A0A1S4E1L6 (nodulin homeobox isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497176 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.6e-79
Identity = 152/175 (86.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASR 64
           NNRKARLARTARD RATLEADNAIPDKQGG+AAGSCDSPDS CEDK+V N GRDRRTASR
Sbjct: 758 NNRKARLARTARDSRATLEADNAIPDKQGGIAAGSCDSPDSPCEDKHVPNTGRDRRTASR 817

Query: 65  TNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEE 124
           TNT NN KNST +FNDSGPTE VHFKP  YVIL+DVLGEEI KGKVHQVHGKWYGRNLEE
Sbjct: 818 TNTANNPKNSTTEFNDSGPTEFVHFKPGQYVILVDVLGEEIAKGKVHQVHGKWYGRNLEE 877

Query: 125 FETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 180
            ETLV+DIDELK DKNTVLPYP+E T T FHEAETKIGVMRVLWDFNKIFML+SQ
Sbjct: 878 LETLVIDIDELKADKNTVLPYPYEATGTSFHEAETKIGVMRVLWDFNKIFMLQSQ 932

[Close]

BLAST of IVF0010377 vs. ExPASy TrEMBL
Match: A0A5D3DAP2 (Nodulin homeobox isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001850 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.6e-79
Identity = 152/175 (86.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASR 64
           NNRKARLARTARD RATLEADNAIPDKQGG+AAGSCDSPDS CEDK+V N GRDRRTASR
Sbjct: 167 NNRKARLARTARDSRATLEADNAIPDKQGGIAAGSCDSPDSPCEDKHVPNTGRDRRTASR 226

Query: 65  TNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEE 124
           TNT NN KNST +FNDSGPTE VHFKP  YVIL+DVLGEEI KGKVHQVHGKWYGRNLEE
Sbjct: 227 TNTANNPKNSTTEFNDSGPTEFVHFKPGQYVILVDVLGEEIAKGKVHQVHGKWYGRNLEE 286

Query: 125 FETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 180
            ETLV+DIDELK DKNTVLPYP+E T T FHEAETKIGVMRVLWDFNKIFML+SQ
Sbjct: 287 LETLVIDIDELKADKNTVLPYPYEATGTSFHEAETKIGVMRVLWDFNKIFMLQSQ 341

[Close]

BLAST of IVF0010377 vs. ExPASy TrEMBL
Match: A0A1S3C587 (nodulin homeobox isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497176 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.6e-79
Identity = 152/175 (86.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASR 64
           NNRKARLARTARD RATLEADNAIPDKQGG+AAGSCDSPDS CEDK+V N GRDRRTASR
Sbjct: 765 NNRKARLARTARDSRATLEADNAIPDKQGGIAAGSCDSPDSPCEDKHVPNTGRDRRTASR 824

Query: 65  TNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEE 124
           TNT NN KNST +FNDSGPTE VHFKP  YVIL+DVLGEEI KGKVHQVHGKWYGRNLEE
Sbjct: 825 TNTANNPKNSTTEFNDSGPTEFVHFKPGQYVILVDVLGEEIAKGKVHQVHGKWYGRNLEE 884

Query: 125 FETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 180
            ETLV+DIDELK DKNTVLPYP+E T T FHEAETKIGVMRVLWDFNKIFML+SQ
Sbjct: 885 LETLVIDIDELKADKNTVLPYPYEATGTSFHEAETKIGVMRVLWDFNKIFMLQSQ 939

[Close]

BLAST of IVF0010377 vs. NCBI nr
Match: KAA0054201.1 (nodulin homeobox isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 360 bits (925), Expect = 1.32e-125
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MNRPNNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRR 60
           MNRPNNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRR
Sbjct: 1   MNRPNNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRR 60

Query: 61  TASRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGR 120
           TASRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGR
Sbjct: 61  TASRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGR 120

Query: 121 NLEEFETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 179
           NLEEFETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ
Sbjct: 121 NLEEFETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 179

[Close]

BLAST of IVF0010377 vs. NCBI nr
Match: KAA0033836.1 (nodulin homeobox isoform X2 [Cucumis melo var. makuwa] >TYK20584.1 nodulin homeobox isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 304 bits (779), Expect = 5.75e-101
Identity = 152/175 (86.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASR 64
           NNRKARLARTARD RATLEADNAIPDKQGG+AAGSCDSPDS CEDK+V N GRDRRTASR
Sbjct: 167 NNRKARLARTARDSRATLEADNAIPDKQGGIAAGSCDSPDSPCEDKHVPNTGRDRRTASR 226

Query: 65  TNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEE 124
           TNT NN KNST +FNDSGPTE VHFKP  YVIL+DVLGEEI KGKVHQVHGKWYGRNLEE
Sbjct: 227 TNTANNPKNSTTEFNDSGPTEFVHFKPGQYVILVDVLGEEIAKGKVHQVHGKWYGRNLEE 286

Query: 125 FETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 179
            ETLV+DIDELK DKNTVLPYP+E T T FHEAETKIGVMRVLWDFNKIFML+SQ
Sbjct: 287 LETLVIDIDELKADKNTVLPYPYEATGTSFHEAETKIGVMRVLWDFNKIFMLQSQ 341

[Close]

BLAST of IVF0010377 vs. NCBI nr
Match: XP_031744039.1 (nodulin homeobox isoform X3 [Cucumis sativus])

HSP 1 Score: 305 bits (781), Expect = 1.94e-96
Identity = 153/175 (87.43%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASR 64
           NNRKARLARTARD RATLEADNAIPDKQGGM AGSCDSPDS CEDK+V N GRDRR+ASR
Sbjct: 574 NNRKARLARTARDSRATLEADNAIPDKQGGMTAGSCDSPDSPCEDKHVPNTGRDRRSASR 633

Query: 65  TNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEE 124
           TNT NNSKNST +FNDSGPTE VHFKP  YVIL+DVLGEEI KGKVHQVHGKWYGRNLEE
Sbjct: 634 TNTANNSKNSTTEFNDSGPTEFVHFKPGQYVILVDVLGEEIAKGKVHQVHGKWYGRNLEE 693

Query: 125 FETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 179
            ETLVVDIDELK DKNTVLPYP+E T T FHEAETKIGVMRVLWDFNKIFML+SQ
Sbjct: 694 LETLVVDIDELKADKNTVLPYPYEATGTSFHEAETKIGVMRVLWDFNKIFMLQSQ 748

[Close]

BLAST of IVF0010377 vs. NCBI nr
Match: XP_011658036.1 (nodulin homeobox isoform X2 [Cucumis sativus] >XP_011658040.1 nodulin homeobox isoform X2 [Cucumis sativus] >XP_031744031.1 nodulin homeobox isoform X2 [Cucumis sativus] >KGN65698.1 hypothetical protein Csa_019854 [Cucumis sativus])

HSP 1 Score: 305 bits (781), Expect = 6.80e-95
Identity = 153/175 (87.43%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASR 64
           NNRKARLARTARD RATLEADNAIPDKQGGM AGSCDSPDS CEDK+V N GRDRR+ASR
Sbjct: 758 NNRKARLARTARDSRATLEADNAIPDKQGGMTAGSCDSPDSPCEDKHVPNTGRDRRSASR 817

Query: 65  TNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEE 124
           TNT NNSKNST +FNDSGPTE VHFKP  YVIL+DVLGEEI KGKVHQVHGKWYGRNLEE
Sbjct: 818 TNTANNSKNSTTEFNDSGPTEFVHFKPGQYVILVDVLGEEIAKGKVHQVHGKWYGRNLEE 877

Query: 125 FETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 179
            ETLVVDIDELK DKNTVLPYP+E T T FHEAETKIGVMRVLWDFNKIFML+SQ
Sbjct: 878 LETLVVDIDELKADKNTVLPYPYEATGTSFHEAETKIGVMRVLWDFNKIFMLQSQ 932

[Close]

BLAST of IVF0010377 vs. NCBI nr
Match: XP_011658033.1 (nodulin homeobox isoform X1 [Cucumis sativus] >XP_031744023.1 nodulin homeobox isoform X1 [Cucumis sativus])

HSP 1 Score: 305 bits (781), Expect = 7.64e-95
Identity = 153/175 (87.43%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNAIPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTASR 64
           NNRKARLARTARD RATLEADNAIPDKQGGM AGSCDSPDS CEDK+V N GRDRR+ASR
Sbjct: 765 NNRKARLARTARDSRATLEADNAIPDKQGGMTAGSCDSPDSPCEDKHVPNTGRDRRSASR 824

Query: 65  TNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNLEE 124
           TNT NNSKNST +FNDSGPTE VHFKP  YVIL+DVLGEEI KGKVHQVHGKWYGRNLEE
Sbjct: 825 TNTANNSKNSTTEFNDSGPTEFVHFKPGQYVILVDVLGEEIAKGKVHQVHGKWYGRNLEE 884

Query: 125 FETLVVDIDELKTDKNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKIFMLKSQ 179
            ETLVVDIDELK DKNTVLPYP+E T T FHEAETKIGVMRVLWDFNKIFML+SQ
Sbjct: 885 LETLVVDIDELKADKNTVLPYPYEATGTSFHEAETKIGVMRVLWDFNKIFMLQSQ 939

[Close]

BLAST of IVF0010377 vs. TAIR 10
Match: AT4G03090.1 (sequence-specific DNA binding;sequence-specific DNA binding transcription factors )

HSP 1 Score: 61.6 bits (148), Expect = 7.3e-10
Identity = 52/174 (29.89%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNA--IPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTA 64
           NNRKA+LAR  +      + +++  +P+  G         P +  +D          +T 
Sbjct: 755 NNRKAKLARANKQTGPAHDNNSSGDLPESPGDENTWQ-QKPSTPIKD----------QTV 814

Query: 65  SRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNL 124
           + T  T  +   T   ++ G       K    V L+D  G+EI KG V +  G+W G +L
Sbjct: 815 TETPKTGENLMRTSSSSEEG------IKQGQQVRLMDERGDEIGKGTVLRTDGEWNGLSL 874

Query: 125 EEFETLVVDIDELKTD---KNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKI 174
           E  +  VVD+ EL         ++PY  +D    F EA ++ GVMRV WD NK+
Sbjct: 875 ETRQICVVDVMELSESYDGSKKMIPYGSDDVGRTFTEANSRFGVMRVAWDVNKL 911

[Close]

BLAST of IVF0010377 vs. TAIR 10
Match: AT4G03090.2 (sequence-specific DNA binding;sequence-specific DNA binding transcription factors )

HSP 1 Score: 61.6 bits (148), Expect = 7.3e-10
Identity = 52/174 (29.89%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 5   NNRKARLARTARDRRATLEADNA--IPDKQGGMAAGSCDSPDSQCEDKNVHNIGRDRRTA 64
           NNRKA+LAR  +      + +++  +P+  G         P +  +D          +T 
Sbjct: 721 NNRKAKLARANKQTGPAHDNNSSGDLPESPGDENTWQ-QKPSTPIKD----------QTV 780

Query: 65  SRTNTTNNSKNSTMKFNDSGPTELVHFKPRLYVILIDVLGEEIVKGKVHQVHGKWYGRNL 124
           + T  T  +   T   ++ G       K    V L+D  G+EI KG V +  G+W G +L
Sbjct: 781 TETPKTGENLMRTSSSSEEG------IKQGQQVRLMDERGDEIGKGTVLRTDGEWNGLSL 840

Query: 125 EEFETLVVDIDELKTD---KNTVLPYPHEDTCTLFHEAETKIGVMRVLWDFNKI 174
           E  +  VVD+ EL         ++PY  +D    F EA ++ GVMRV WD NK+
Sbjct: 841 ETRQICVVDVMELSESYDGSKKMIPYGSDDVGRTFTEANSRFGVMRVAWDVNKL 877

The following BLAST results are available for this feature:

BLAST of IVF0010377 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JI44	1.0e-08	29.89	Nodulin homeobox OS=Arabidopsis thaliana OX=3702 GN=NDX PE=2 SV=1	[more]

BLAST of IVF0010377 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKY3	1.8e-96	100.00	Nodulin homeobox isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A0A0LVA2	1.5e-79	87.43	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G502860 PE...	[more]
A0A1S4E1L6	2.6e-79	86.86	nodulin homeobox isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497176 PE=4 SV=1	[more]
A0A5D3DAP2	2.6e-79	86.86	Nodulin homeobox isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3C587	2.6e-79	86.86	nodulin homeobox isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497176 PE=4 SV=1	[more]

BLAST of IVF0010377 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054201.1	1.32e-125	100.00	nodulin homeobox isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0033836.1	5.75e-101	86.86	nodulin homeobox isoform X2 [Cucumis melo var. makuwa] >TYK20584.1 nodulin homeo...	[more]
XP_031744039.1	1.94e-96	87.43	nodulin homeobox isoform X3 [Cucumis sativus]	[more]
XP_011658036.1	6.80e-95	87.43	nodulin homeobox isoform X2 [Cucumis sativus] >XP_011658040.1 nodulin homeobox i...	[more]
XP_011658033.1	7.64e-95	87.43	nodulin homeobox isoform X1 [Cucumis sativus] >XP_031744023.1 nodulin homeobox i...	[more]

BLAST of IVF0010377 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03090.1	7.3e-10	29.89	sequence-specific DNA binding;sequence-specific DNA binding transcription factor...	[more]
AT4G03090.2	7.3e-10	29.89	sequence-specific DNA binding;sequence-specific DNA binding transcription factor...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	PANTHER	PTHR35743:SF1	NODULIN HOMEOBOX	coord: 3..177
IPR039325	Nodulin homeobox protein	PANTHER	PTHR35743	NODULIN HOMEOBOX	coord: 3..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010377.1	IVF0010377.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009908	flower development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003697	single-stranded DNA binding