IVF0009764 (gene) Melon (IVF77) v1

Overview


Name	IVF0009764
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ribosomal RNA-processing protein 8
Location	chr09: 4286376 .. 4289669 (+)
RNA-Seq Expression	IVF0009764
Synteny	IVF0009764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACTCAACAATCGCCCTAGTTGTTTCATCAAGGTTTCAACAATGGCGGATGAGGGCCGCTCAAGCAAAAAGCGGAAGAGGGCGAAGCGTCGCGGAACTGACAAAAACAAAGATTCTACCTATAATCTACCGGATGCTACTGAGCTCAGTAGCCAAGATATCGTTGTTTCTTCTTCTTCCGACGGCAAAAAAACTCAGAGGGTTTCCGGCTCGTCTAGTTTCCTCGATAAGGTTCGACTTCTTTTAGAAAACTATCATCGTTTTTTAAATAGTTGTTTTTGGGGGAAGTTTAAGGACTGTAATTATAATTGTATACATTGTTGTTGGGTAATGATGCAGATGCGTGCTCGTTTGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACTTGCACGTAATGATTGTTTCTTCTATTCTTTTGCTATCACATCTTGTGTTTTTGGTTCTTATAATTTAAACTTTATTAATTTACTTCATATCTAGAGCCACATTATTTGAAGCCAATTGTTCTTAATTTTCGTATTTTGTGTTTCAGAGGGGAAGAGGCGCTTAACTATTTCAAGGAAGACAAGCTTTTGTTTGATATGGTAAGTTTTGTCTCTGTTCCTGCTTCCCAAATGCAGTAGATGTTACTATTTAAGAACTAGTTTCTTCACGCACGCACAGAGAAGAAGATCATATCTCATCCTCTCTCTCTTTGGGACAAAATATTTTCAATAGAGGAAACTTTACCTCTCTTTGGGTCAAAAGTTACAATCATCATTCTTGTAAATATGTAATTTTTTCTATTTATACAACGTTGTAAAAGGATTTTTAGACTTAACATCTTGAGGCAAGGTTCAATGTTGAGAAGCTTTTGAGTTATGAGAATTTGAACTAGTACTAATTTTGCTAGTGTGACTTTAAAAGCATTGAATACAAAAATTATAGTATAAGTCAATCCTATTTATGATTTAATACGAGTTTGAAGACATCCTTTTAGAATTTTTGTGTAAGTGTTAATTCACAGTTTAGGATTTATAGTGTTTTAAACTGAATTTGAGGCTTACAGTTATGCCTCATATCCCTAGGCCTTTGATTGGAAAAGTCTCAAGATCGCCTGTAGCCTTTTAGAATATGGTCTATATATTGATCATCAAGGAAGTTTTAGATGGTGAATTTGATTTATATAGCCTAGTACTAGGGTTGACTAACATTTTGACGGCTAGTATCATACAGGATACCAAGAGCAAATGACACATTGGCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTGAAGGAGCATGATCCCTCATTTATCGTGGCTGATTTTGGCTGTGGTGAGCTTTAGGGAAAAACCTATTTTTCCCTTGATTCCTTTAACTTACTATTGATCAAGTGTTCGATAGTTTTAAGGGCCTTCCTTCTTATTTCTCCATTTTCCTCATCTTTTTTTCTCCTTCAAATTTAATTACAGGGGATGCACGCCTTTCAAAGAATGTGAAGAATAAAGTTTTCTCATTTGATCTCGTTTCAAAAGATCCTTCTGTTATTGCTTGTGATATGTCAAATGTAAGTGCACTGTATTTGAATTTAATGCCGTAAAATGCATTTAGACATACATCTTCAGTTCTTGCATGAAAGTTAGCCATATTGATAATAATATTCACTTGCTGTCGACGTCGTTGTTTTGTTATAAATTTTTATTATTAGGCCAAAGCTCTTATTATGACTTATTAACTTAACGAGTAGAAGTTGTTGAAAAGGTTTTAGTTTTACATTTTTTTGTTCTCCCACAACATTTGGTGATTTAGGGAGAATAAGTCATTGGTGAATTGCCATTAGTGATTGGAGGGAGGGACATAAAGTGGATAATAACTTCTATAATAATATTAATGTCAGCCACCGGTTGACCTAGTGGTAAAAAATGTAAAAACCTCAATAATGAACTAAGAGGTCATGGGTTCAATCCATGTGGCCATCTATCTAAGAATAATTTCATACGAGTTTCCTTTCACACTCAAATGTTGTAGGGTCAAGTGGGTTGTCCCGTGATATTAGTCGAGGTGCATATAAGTTGGCGCAACACGAATAAAAAAATATAATAACATTAATGTCAACTATCACAATCATTATTAGAAGCAGCTACAGTGCAGAGTAAGTGAGGAGCATTGCATTACCATCTTTTTCATTTGTCTTTCATGAAATTTATATTAAACTCCTTGACCGTTGTCTTCAAGTAAGCAAGAAAGCTCTAAAAGCTTGTTAATGTTTATGCCACTGGCAGACACCTCTCGACTCTGCATCTGTGGATGTTGCTGTCTTTTGCCTTTCACTTATGGGAGTCAATTATGCAAGTTACTTGGCAGAAGCACGACGAGTGCTTAAACCACGGTTTGTGAGCTATTTTTGGCTCTCTGTAAGCTTTTTAGCCTCATCAAACTTGTCTATCATGTGGCCGCTAAACTTTCTGTTTGTAAATGCAGTGGATGGCTTTTAATATCAGAAGTTAAAAGCAGATTTGACCCTAGCAATGGAGGAGCCGACCCCCAAAAGTTCATAAAGGCTGTTTGTGAGCTAGGTTTCGTCTCAGCTTTGAAGGTATACTCATTTTCTGTTATTTAGCTAGCATTATTTGTTCCTTTCTTGGTGCTAATTAATAAGTATCATGTGGCAGGATTTCTCAAATAAGATGTTTATTTTGTTGTACTTCAAGAAAAAGGTTTGTAAATGTTCCAAGTACCTTACTCTACACGCTAAAGGTCTAACTGTCTGTTTTCGTATGTTTGATAATAATTTCGTTTTTTTTTATTTTTGGTTTTTTAAAATTAAGCCTAGTTTTTCTCATTTTTTTATGATGGTTTGCATCTTTTAAGTACAACGGTTGAATTCTTAACCAAATTTCAAAGAAAAGAAAAACAAATTCTTAAAAACTCCTTATAAATTTTAAAATTTAGGTTGTTTTTTGGAAACATAATAAAAATAGATAACAAAGCAAGAAATTTAGAAGGAAAAAGACATTTGTGGGCATAATTTTCAAAAACTAAAAAAGTAGCCATTTTTCTGCTCGATTTAATAATTCTTCAGCCTCTTTTCTTTGCAGGATGAGAAAACTTCCGAGGGGAAAGACATTGATTGGCCCCAACTAAAACCTTGTTTGTACAAACGGCGATGAGTTTGCATTTTCTTTTTTTTGGTTATGTTAAAAAGAAACTCACGTCTATATTTCTACGATCTTATCGTAAATTATTTTGTACTTCACTGATGTTGTCAAATGAAATGTTGGTTGGGCAGTTATTTCTAA

mRNA sequence

CAACTCAACAATCGCCCTAGTTGTTTCATCAAGGTTTCAACAATGGCGGATGAGGGCCGCTCAAGCAAAAAGCGGAAGAGGGCGAAGCGTCGCGGAACTGACAAAAACAAAGATTCTACCTATAATCTACCGGATGCTACTGAGCTCAGTAGCCAAGATATCGTTGTTTCTTCTTCTTCCGACGGCAAAAAAACTCAGAGGGTTTCCGGCTCGTCTAGTTTCCTCGATAAGATGCGTGCTCGTTTGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACTTGCACAGGGGAAGAGGCGCTTAACTATTTCAAGGAAGACAAGCTTTTGTTTGATATGTATCATACAGGATACCAAGAGCAAATGACACATTGGCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTGAAGGAGCATGATCCCTCATTTATCGTGGCTGATTTTGGCTGTGGGGATGCACGCCTTTCAAAGAATGTGAAGAATAAAGTTTTCTCATTTGATCTCGTTTCAAAAGATCCTTCTGTTATTGCTTGTGATATGTCAAATACACCTCTCGACTCTGCATCTGTGGATGTTGCTGTCTTTTGCCTTTCACTTATGGGAGTCAATTATGCAAGTTACTTGGCAGAAGCACGACGAGTGCTTAAACCACGTGGATGGCTTTTAATATCAGAAGTTAAAAGCAGATTTGACCCTAGCAATGGAGGAGCCGACCCCCAAAAGTTCATAAAGGCTGTTTGTGAGCTAGGTTTCGTCTCAGCTTTGAAGGATTTCTCAAATAAGATGTTTATTTTGTTGTACTTCAAGAAAAAGGTTTGTAAATGTTCCAAGTACCTTACTCTACACGCTAAAGGTCTAACTGTCTGTTTTCGTATGTTTGATAATAATTTCGTTTTTTTTTATTTTTGGTTTTTTAAAATTAAGCCTAGTTTTTCTCATTTTTTTATGATGGTTTGCATCTTTTAAGTACAACGGTTGAATTCTTAACCAAATTTCAAAGAAAAGAAAAACAAATTCTTAAAAACTCCTTATAAATTTTAAAATTTAGGTTGTTTTTTGGAAACATAATAAAAATAGATAACAAAGCAAGAAATTTAGAAGGAAAAAGACATTTGTGGGCATAATTTTCAAAAACTAAAAAAGTAGCCATTTTTCTGCTCGATTTAATAATTCTTCAGCCTCTTTTCTTTGCAGGATGAGAAAACTTCCGAGGGGAAAGACATTGATTGGCCCCAACTAAAACCTTGTTTGTACAAACGGCGATGAGTTTGCATTTTCTTTTTTTTGGTTATGTTAAAAAGAAACTCACGTCTATATTTCTACGATCTTATCGTAAATTATTTTGTACTTCACTGATGTTGTCAAATGAAATGTTGGTTGGGCAGTTATTTCTAA

Coding sequence (CDS)

ATGGCGGATGAGGGCCGCTCAAGCAAAAAGCGGAAGAGGGCGAAGCGTCGCGGAACTGACAAAAACAAAGATTCTACCTATAATCTACCGGATGCTACTGAGCTCAGTAGCCAAGATATCGTTGTTTCTTCTTCTTCCGACGGCAAAAAAACTCAGAGGGTTTCCGGCTCGTCTAGTTTCCTCGATAAGATGCGTGCTCGTTTGTCAGGAGGGCATTTCAGGATGCTTAATGAGAAGTTGTATACTTGCACAGGGGAAGAGGCGCTTAACTATTTCAAGGAAGACAAGCTTTTGTTTGATATGTATCATACAGGATACCAAGAGCAAATGACACATTGGCCTGAGCTGCCTGTGAATTTAATCATAAAATGGCTGAAGGAGCATGATCCCTCATTTATCGTGGCTGATTTTGGCTGTGGGGATGCACGCCTTTCAAAGAATGTGAAGAATAAAGTTTTCTCATTTGATCTCGTTTCAAAAGATCCTTCTGTTATTGCTTGTGATATGTCAAATACACCTCTCGACTCTGCATCTGTGGATGTTGCTGTCTTTTGCCTTTCACTTATGGGAGTCAATTATGCAAGTTACTTGGCAGAAGCACGACGAGTGCTTAAACCACGTGGATGGCTTTTAATATCAGAAGTTAAAAGCAGATTTGACCCTAGCAATGGAGGAGCCGACCCCCAAAAGTTCATAAAGGCTGTTTGTGAGCTAGGTTTCGTCTCAGCTTTGAAGGATTTCTCAAATAAGATGTTTATTTTGTTGTACTTCAAGAAAAAGGTTTGTAAATGTTCCAAGTACCTTACTCTACACGCTAAAGGTCTAACTGTCTGTTTTCGTATGTTTGATAATAATTTCGTTTTTTTTTATTTTTGGTTTTTTAAAATTAAGCCTAGTTTTTCTCATTTTTTTATGATGGTTTGCATCTTTTAA

Protein sequence

MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNLIIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGFVSALKDFSNKMFILLYFKKKVCKCSKYLTLHAKGLTVCFRMFDNNFVFFYFWFFKIKPSFSHFFMMVCIF

Homology

[Close]

BLAST of IVF0009764 vs. ExPASy Swiss-Prot
Match: Q84JC0 (Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g40530 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.1e-89
Identity = 167/267 (62.55%), Postives = 207/267 (77.53%), Query Frame = 0


Query: 3   DEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGS----- 62
           +E ++S+ RKR ++R    +K+      +  E + ++     +    K Q+  GS     
Sbjct: 4   EENKTSRNRKRKRQRNPKPSKE------EPIETTPKNQNEKKNQRDTKNQQHGGSSAPSK 63

Query: 63  ----SSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHW 122
               S+FLD +R RLSGG FRMLNEKLYTC+G+EAL+YFKED  +FDMYHTGYQ+QM++W
Sbjct: 64  RPKPSNFLDALRERLSGGQFRMLNEKLYTCSGKEALDYFKEDPQMFDMYHTGYQQQMSNW 123

Query: 123 PELPVNLIIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTP 182
           PELPVN II WL  +  S +VADFGCGDAR++K+VKNKVFSFDLVSK+PSVIACDMSNT 
Sbjct: 124 PELPVNSIINWLLSNSSSLVVADFGCGDARIAKSVKNKVFSFDLVSKNPSVIACDMSNTS 183

Query: 183 LDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIK 242
           L+S+SVDVAVFCLSLMG NY+SY+ EA RVL+P G LLI+EVKSRFDP+NGGADP+ F+K
Sbjct: 184 LESSSVDVAVFCLSLMGTNYSSYIKEAHRVLRPSGMLLIAEVKSRFDPNNGGADPKDFVK 243

Query: 243 AVCELGFVSALKDFSNKMFILLYFKKK 261
           AVC+LGF S LKDFSNKMFIL +FKKK
Sbjct: 244 AVCDLGFTSVLKDFSNKMFILFHFKKK 264

[Close]

BLAST of IVF0009764 vs. ExPASy Swiss-Prot
Match: O43159 (Ribosomal RNA-processing protein 8 OS=Homo sapiens OX=9606 GN=RRP8 PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 8.2e-46
Identity = 104/249 (41.77%), Postives = 139/249 (55.82%), Query Frame = 0


Query: 11  RKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSFLDKMRARLSG 70
           R R K +   KNK     +PD     +       S   +     + + +   +M  RL G
Sbjct: 189 RNRQKNKRRCKNKFQPPQVPDQAPAEAPTEKTEVSPVPRTDSHEARAGALRARMAQRLDG 248

Query: 71  GHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNLIIKWLKEHDP 130
             FR LNE+LY+     A   F+ED   F +YH G+Q Q+  WP  PV+ I + L++   
Sbjct: 249 ARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPA 308

Query: 131 SFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVFCLSLMG 190
           S +VADFGCGD RL+ +++N V  FDL S DP V  CDM+  PL+  SVDVAVFCLSLMG
Sbjct: 309 SLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMG 368

Query: 191 VNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGFVSALKDFSNK 250
            N   +L EA RVLKP G L ++EV SRF+      D + F++AV +LGF    KD +N 
Sbjct: 369 TNIRDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKIVSKDLTNS 428

Query: 251 MFILLYFKK 260
            F L  F+K
Sbjct: 429 HFFLFDFQK 431

[Close]

BLAST of IVF0009764 vs. ExPASy Swiss-Prot
Match: Q5U4F0 (Ribosomal RNA-processing protein 8 OS=Rattus norvegicus OX=10116 GN=Rrp8 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.1e-45
Identity = 106/253 (41.90%), Postives = 145/253 (57.31%), Query Frame = 0


Query: 11  RKRAKRRGTDKNK----DSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSFLDKMRA 70
           R R K +   KNK    ++   +P    +   ++  +  SD ++T+    + +   +M  
Sbjct: 190 RNRQKNKRRHKNKFRPLETQDQVPLKASIEETEVPPAPKSDSQETR----AGALRARMTQ 249

Query: 71  RLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNLIIKWLK 130
           RL G  FR LNE+LY+     A   F+ED   F +YH G+Q Q+  WP  PV+ I K L+
Sbjct: 250 RLDGARFRYLNEQLYSGPSSAAQCLFQEDPEAFLLYHRGFQRQVKKWPLHPVDRIAKDLR 309

Query: 131 EHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVFCL 190
           +   S +VADFGCGD RL+ +V+N V  FDL + DP V  CDM+  PL+  SVDVAVFCL
Sbjct: 310 QKPASLVVADFGCGDCRLASSVRNPVHCFDLAALDPRVTVCDMAQVPLEDESVDVAVFCL 369

Query: 191 SLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGFVSALKD 250
           SLMG N   +L EA RVLKP G L ++EV SRF+      D + F+ AV +LGF    KD
Sbjct: 370 SLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFE------DIRTFLGAVTKLGFKVIYKD 429

Query: 251 FSNKMFILLYFKK 260
            +N  F L  F+K
Sbjct: 430 LTNSHFFLFDFEK 432

[Close]

BLAST of IVF0009764 vs. ExPASy Swiss-Prot
Match: Q9DB85 (Ribosomal RNA-processing protein 8 OS=Mus musculus OX=10090 GN=Rrp8 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.4e-44
Identity = 105/249 (42.17%), Postives = 136/249 (54.62%), Query Frame = 0


Query: 11  RKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSFLDKMRARLSG 70
           R R K +   KNK      P+     +           K   + S + +   +M  RL G
Sbjct: 190 RNRQKNKRRHKNKFRPLQTPEQAPPKASIEETEVPPVPKSDSQESRAGALRARMTQRLDG 249

Query: 71  GHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNLIIKWLKEHDP 130
             FR LNE+LY+     A   F+ED   F +YH G+Q Q+  WP  PV+ I K L++   
Sbjct: 250 ARFRYLNEQLYSGPSSAARRLFQEDPEAFLLYHRGFQRQVKKWPLHPVDRIAKDLRQKPA 309

Query: 131 SFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVDVAVFCLSLMG 190
           S +VADFGCGD RL+ +V+N V  FDL S DP V  CDM+  PL+  SVDVAVFCLSLMG
Sbjct: 310 SLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMG 369

Query: 191 VNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGFVSALKDFSNK 250
            N   +L EA RVLK  G L ++EV SRF+      D + F+ AV +LGF    KD +N 
Sbjct: 370 TNIRDFLEEANRVLKTGGLLKVAEVSSRFE------DIRTFLGAVTKLGFKIIYKDLTNS 429

Query: 251 MFILLYFKK 260
            F L  F+K
Sbjct: 430 HFFLFDFEK 432

[Close]

BLAST of IVF0009764 vs. ExPASy Swiss-Prot
Match: Q10257 (25S rRNA (adenine(645)-N(1))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp8 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.8e-43
Identity = 106/280 (37.86%), Postives = 159/280 (56.79%), Query Frame = 0


Query: 4   EGRSSKKRKRAKRRGT------------DKNKDSTYNLPDATELSSQDIVVSSSSDGKKT 63
           E R  KKRK+ +R+               K K  T N    +E+  +  V S     K  
Sbjct: 21  ESRKEKKRKKGERKNVGDKGEKLNEKVLKKAKSVTTNNSLKSEIKKEKSVPSIKEKNKGD 80

Query: 64  QRVSGSSSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMT 123
            + +  +S   KM+ +L G +FR +NE+LYT   ++A+  FKE+  LFD+YH G++ Q+ 
Sbjct: 81  AKHTKLTSLQQKMKDKLDGANFRWINEQLYTTESDKAVQMFKENPDLFDIYHAGFRYQVE 140

Query: 124 HWPELPVNLIIKWLK---EHD-----PSFIVADFGCGDARLSKNVKN----KVFSFDLVS 183
            WPE PV++ I+ LK   EH       + ++AD GCG+A+++   +     +V SFDLV+
Sbjct: 141 GWPENPVDIFIQHLKIRFEHSNAKKKNNIVIADLGCGEAKIASTFRKSRSLQVHSFDLVA 200

Query: 184 KDPSVIACDMSNTPLDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRF 243
            +  V+ACD++N P+   +VD+AVFCLSLMG N+ S+L EA R+LK  G L ++E+KSRF
Sbjct: 201 PNEHVVACDIANVPMADETVDIAVFCLSLMGTNWQSFLKEAYRILKVGGLLWVAEIKSRF 260

Query: 244 DPSNGGADPQKFIKAVCELGFVSALKDFSNKMFILLYFKK 260
              +G    + F K + +LGF +      NKMF L  FKK
Sbjct: 261 SDKSG----EVFAKELPKLGFETKSIQLQNKMFTLFEFKK 296

[Close]

BLAST of IVF0009764 vs. ExPASy TrEMBL
Match: A0A5A7T472 (Ribosomal RNA-processing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00030 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.6e-143
Identity = 262/266 (98.50%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF
Sbjct: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKVCKCSK 267
           VSALKDFSNKMFILLYFKKK  K S+
Sbjct: 241 VSALKDFSNKMFILLYFKKKDEKTSE 266

[Close]

BLAST of IVF0009764 vs. ExPASy TrEMBL
Match: A0A1S3C8U7 (Ribosomal RNA-processing protein 8 OS=Cucumis melo OX=3656 GN=LOC103498109 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.6e-143
Identity = 262/266 (98.50%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF
Sbjct: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKVCKCSK 267
           VSALKDFSNKMFILLYFKKK  K S+
Sbjct: 241 VSALKDFSNKMFILLYFKKKDEKTSE 266

[Close]

BLAST of IVF0009764 vs. ExPASy TrEMBL
Match: A0A0A0KUD5 (Ribosomal RNA-processing protein 8 OS=Cucumis sativus OX=3659 GN=Csa_5G523020 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 2.0e-135
Identity = 249/266 (93.61%), Postives = 258/266 (96.99%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEG SS+KRKRAKRRGT+K+K ST NLPDATE +SQDIVVS+SSDGKKT RVSGSSSF
Sbjct: 1   MADEGSSSRKRKRAKRRGTNKSKVSTNNLPDATEPTSQDIVVSASSDGKKTLRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDK+LFD+YHTGYQEQMTHWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKVCKCSK 267
           VSALKDFSNKMFILLYFKKK  K S+
Sbjct: 241 VSALKDFSNKMFILLYFKKKDEKTSE 266

[Close]

BLAST of IVF0009764 vs. ExPASy TrEMBL
Match: A0A1S3C8Q8 (Ribosomal RNA-processing protein 8 OS=Cucumis melo OX=3656 GN=LOC103498109 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.6e-135
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF
Sbjct: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240

Query: 241 VSALKD 247
           VSALKD
Sbjct: 241 VSALKD 246

[Close]

BLAST of IVF0009764 vs. ExPASy TrEMBL
Match: A0A6J1FDA4 (Ribosomal RNA-processing protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111444708 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 5.0e-131
Identity = 238/265 (89.81%), Postives = 252/265 (95.09%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEGRS+KKRKRAKRR +DKNKD T ++PDATE S QDIVVS+SSDGKK++R SGSSSF
Sbjct: 1   MADEGRSNKKRKRAKRRRSDKNKDFTNSIPDATEPSGQDIVVSTSSDGKKSRRASGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYF ED++LFD+YHTGYQEQM HWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFNEDQVLFDVYHTGYQEQMLHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDS+SVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYL EARRVLKPRGWLLISEVKSRFDPSNGGADP +F++AVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLTEARRVLKPRGWLLISEVKSRFDPSNGGADPNEFVRAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKVCKCS 266
           VSALKDFSNKMFILLYFKKK  K S
Sbjct: 241 VSALKDFSNKMFILLYFKKKDEKIS 265

[Close]

BLAST of IVF0009764 vs. NCBI nr
Match: XP_008458812.1 (PREDICTED: ribosomal RNA-processing protein 8 isoform X1 [Cucumis melo] >KAA0037588.1 ribosomal RNA-processing protein 8 isoform X1 [Cucumis melo var. makuwa] >TYK09324.1 ribosomal RNA-processing protein 8 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 516 bits (1329), Expect = 2.90e-183
Identity = 262/266 (98.50%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF
Sbjct: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKVCKCSK 266
           VSALKDFSNKMFILLYFKKK  K S+
Sbjct: 241 VSALKDFSNKMFILLYFKKKDEKTSE 266

[Close]

BLAST of IVF0009764 vs. NCBI nr
Match: XP_004142786.1 (ribosomal RNA-processing protein 8 [Cucumis sativus] >KGN51356.1 hypothetical protein Csa_009025 [Cucumis sativus])

HSP 1 Score: 490 bits (1261), Expect = 6.64e-173
Identity = 249/266 (93.61%), Postives = 258/266 (96.99%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEG SS+KRKRAKRRGT+K+K ST NLPDATE +SQDIVVS+SSDGKKT RVSGSSSF
Sbjct: 1   MADEGSSSRKRKRAKRRGTNKSKVSTNNLPDATEPTSQDIVVSASSDGKKTLRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDK+LFD+YHTGYQEQMTHWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKVCKCSK 266
           VSALKDFSNKMFILLYFKKK  K S+
Sbjct: 241 VSALKDFSNKMFILLYFKKKDEKTSE 266

[Close]

BLAST of IVF0009764 vs. NCBI nr
Match: XP_008458813.1 (PREDICTED: ribosomal RNA-processing protein 8 isoform X2 [Cucumis melo])

HSP 1 Score: 489 bits (1259), Expect = 7.74e-173
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF
Sbjct: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240

Query: 241 VSALKD 246
           VSALKD
Sbjct: 241 VSALKD 246

[Close]

BLAST of IVF0009764 vs. NCBI nr
Match: XP_038889651.1 (ribosomal RNA-processing protein 8 [Benincasa hispida])

HSP 1 Score: 485 bits (1249), Expect = 4.30e-171
Identity = 247/266 (92.86%), Postives = 256/266 (96.24%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEGRSSKKRKRAKRRG++KNKDST NLPD T  S QDIVVS SSDGK +Q+VSGSSSF
Sbjct: 1   MADEGRSSKKRKRAKRRGSNKNKDSTNNLPDTTAPSRQDIVVSPSSDGK-SQKVSGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDK+LFD+YHTGYQEQMTHWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKVLFDVYHTGYQEQMTHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADP+KFIKAVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPKKFIKAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKKVCKCSK 266
           +SALKDFSNKMFILLYFKKK  K S+
Sbjct: 241 ISALKDFSNKMFILLYFKKKDDKTSE 265

[Close]

BLAST of IVF0009764 vs. NCBI nr
Match: XP_022938486.1 (ribosomal RNA-processing protein 8-like [Cucurbita moschata])

HSP 1 Score: 475 bits (1223), Expect = 4.07e-167
Identity = 236/260 (90.77%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MADEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGSSSF 60
           MADEGRS+KKRKRAKRR +DKNKD T ++PDATE S QDIVVS+SSDGKK++R SGSSSF
Sbjct: 1   MADEGRSNKKRKRAKRRRSDKNKDFTNSIPDATEPSGQDIVVSTSSDGKKSRRASGSSSF 60

Query: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHWPELPVNL 120
           LDKMRARLSGGHFRMLNEKLYTCTGEEALNYF ED++LFD+YHTGYQEQM HWPELPVNL
Sbjct: 61  LDKMRARLSGGHFRMLNEKLYTCTGEEALNYFNEDQVLFDVYHTGYQEQMLHWPELPVNL 120

Query: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSASVD 180
           IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDS+SVD
Sbjct: 121 IIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTPLDSSSVD 180

Query: 181 VAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIKAVCELGF 240
           VAVFCLSLMGVNYASYL EARRVLKPRGWLLISEVKSRFDPSNGGADP +F++AVCELGF
Sbjct: 181 VAVFCLSLMGVNYASYLTEARRVLKPRGWLLISEVKSRFDPSNGGADPNEFVRAVCELGF 240

Query: 241 VSALKDFSNKMFILLYFKKK 260
           VSALKDFSNKMFILLYFKKK
Sbjct: 241 VSALKDFSNKMFILLYFKKK 260

[Close]

BLAST of IVF0009764 vs. TAIR 10
Match: AT5G40530.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-90
Identity = 167/267 (62.55%), Postives = 207/267 (77.53%), Query Frame = 0


Query: 3   DEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGS----- 62
           +E ++S+ RKR ++R    +K+      +  E + ++     +    K Q+  GS     
Sbjct: 4   EENKTSRNRKRKRQRNPKPSKE------EPIETTPKNQNEKKNQRDTKNQQHGGSSAPSK 63

Query: 63  ----SSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHW 122
               S+FLD +R RLSGG FRMLNEKLYTC+G+EAL+YFKED  +FDMYHTGYQ+QM++W
Sbjct: 64  RPKPSNFLDALRERLSGGQFRMLNEKLYTCSGKEALDYFKEDPQMFDMYHTGYQQQMSNW 123

Query: 123 PELPVNLIIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTP 182
           PELPVN II WL  +  S +VADFGCGDAR++K+VKNKVFSFDLVSK+PSVIACDMSNT 
Sbjct: 124 PELPVNSIINWLLSNSSSLVVADFGCGDARIAKSVKNKVFSFDLVSKNPSVIACDMSNTS 183

Query: 183 LDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIK 242
           L+S+SVDVAVFCLSLMG NY+SY+ EA RVL+P G LLI+EVKSRFDP+NGGADP+ F+K
Sbjct: 184 LESSSVDVAVFCLSLMGTNYSSYIKEAHRVLRPSGMLLIAEVKSRFDPNNGGADPKDFVK 243

Query: 243 AVCELGFVSALKDFSNKMFILLYFKKK 261
           AVC+LGF S LKDFSNKMFIL +FKKK
Sbjct: 244 AVCDLGFTSVLKDFSNKMFILFHFKKK 264

[Close]

BLAST of IVF0009764 vs. TAIR 10
Match: AT5G40530.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 318.5 bits (815), Expect = 5.8e-87
Identity = 168/291 (57.73%), Postives = 208/291 (71.48%), Query Frame = 0


Query: 3   DEGRSSKKRKRAKRRGTDKNKDSTYNLPDATELSSQDIVVSSSSDGKKTQRVSGS----- 62
           +E ++S+ RKR ++R    +K+      +  E + ++     +    K Q+  GS     
Sbjct: 4   EENKTSRNRKRKRQRNPKPSKE------EPIETTPKNQNEKKNQRDTKNQQHGGSSAPSK 63

Query: 63  ----SSFLDKMRARLSGGHFRMLNEKLYTCTGEEALNYFKEDKLLFDMYHTGYQEQMTHW 122
               S+FLD +R RLSGG FRMLNEKLYTC+G+EAL+YFKED  +FDMYHTGYQ+QM++W
Sbjct: 64  RPKPSNFLDALRERLSGGQFRMLNEKLYTCSGKEALDYFKEDPQMFDMYHTGYQQQMSNW 123

Query: 123 PELPVNLIIKWLKEHDPSFIVADFGCGDARLSKNVKNKVFSFDLVSKDPSVIACDMSNTP 182
           PELPVN II WL  +  S +VADFGCGDAR++K+VKNKVFSFDLVSK+PSVIACDMSNT 
Sbjct: 124 PELPVNSIINWLLSNSSSLVVADFGCGDARIAKSVKNKVFSFDLVSKNPSVIACDMSNTS 183

Query: 183 LDSASVDVAVFCLSLMGVNYASYLAEARRVLKPRGWLLISEVKSRFDPSNGGADPQKFIK 242
           L+S+SVDVAVFCLSLMG NY+SY+ EA RVL+P G LLI+EVKSRFDP+NGGADP+ F+K
Sbjct: 184 LESSSVDVAVFCLSLMGTNYSSYIKEAHRVLRPSGMLLIAEVKSRFDPNNGGADPKDFVK 243

Query: 243 AVCELGFVSALK-----------------------DFSNKMFILLYFKKKV 262
           AVC+LGF S LK                       DFSNKMFIL +FKKKV
Sbjct: 244 AVCDLGFTSVLKVQSFLLLFFISTIRKKLIWFFEQDFSNKMFILFHFKKKV 288

The following BLAST results are available for this feature:

BLAST of IVF0009764 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JC0	2.1e-89	62.55	Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g40530 ...	[more]
O43159	8.2e-46	41.77	Ribosomal RNA-processing protein 8 OS=Homo sapiens OX=9606 GN=RRP8 PE=1 SV=2	[more]
Q5U4F0	3.1e-45	41.90	Ribosomal RNA-processing protein 8 OS=Rattus norvegicus OX=10116 GN=Rrp8 PE=1 SV...	[more]
Q9DB85	3.4e-44	42.17	Ribosomal RNA-processing protein 8 OS=Mus musculus OX=10090 GN=Rrp8 PE=1 SV=1	[more]
Q10257	3.8e-43	37.86	25S rRNA (adenine(645)-N(1))-methyltransferase OS=Schizosaccharomyces pombe (str...	[more]

BLAST of IVF0009764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T472	2.6e-143	98.50	Ribosomal RNA-processing protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C8U7	2.6e-143	98.50	Ribosomal RNA-processing protein 8 OS=Cucumis melo OX=3656 GN=LOC103498109 PE=3 ...	[more]
A0A0A0KUD5	2.0e-135	93.61	Ribosomal RNA-processing protein 8 OS=Cucumis sativus OX=3659 GN=Csa_5G523020 PE...	[more]
A0A1S3C8Q8	2.6e-135	100.00	Ribosomal RNA-processing protein 8 OS=Cucumis melo OX=3656 GN=LOC103498109 PE=3 ...	[more]
A0A6J1FDA4	5.0e-131	89.81	Ribosomal RNA-processing protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111444708...	[more]

BLAST of IVF0009764 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458812.1	2.90e-183	98.50	PREDICTED: ribosomal RNA-processing protein 8 isoform X1 [Cucumis melo] >KAA0037...	[more]
XP_004142786.1	6.64e-173	93.61	ribosomal RNA-processing protein 8 [Cucumis sativus] >KGN51356.1 hypothetical pr...	[more]
XP_008458813.1	7.74e-173	100.00	PREDICTED: ribosomal RNA-processing protein 8 isoform X2 [Cucumis melo]	[more]
XP_038889651.1	4.30e-171	92.86	ribosomal RNA-processing protein 8 [Benincasa hispida]	[more]
XP_022938486.1	4.07e-167	90.77	ribosomal RNA-processing protein 8-like [Cucurbita moschata]	[more]

BLAST of IVF0009764 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40530.1	1.5e-90	62.55	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT5G40530.2	5.8e-87	57.73	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042036	Ribosomal RNA-processing protein 8, N-terminal domain	GENE3D	1.10.10.2150		coord: 64..114 e-value: 3.6E-25 score: 89.8
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 116..279 e-value: 8.1E-49 score: 167.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 134..213 e-value: 2.51033E-4 score: 37.7947
IPR007823	Ribosomal RNA processing protein 8	PFAM	PF05148	Methyltransf_8	coord: 62..264 e-value: 8.5E-71 score: 238.3
IPR007823	Ribosomal RNA processing protein 8	PANTHER	PTHR12787	UNCHARACTERIZED	coord: 9..261
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 99..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009764.2	IVF0009764.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0008168	methyltransferase activity