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IVF0009289 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAACAATGGCGGACGCTTCAAAGAAAATTTCTTCTTCATCCTCATCAACTTTACCCTTCAAATTGAAGAAACCTTTGTGTTCTAACTTCAAATCTTTACTTGAGGATTCACAATCCTTGAGCTCCAAGACGCCGGAGAAGCCGGCGGAGCTCTCTACCAGATCTAGGAACCGTAAGGTTGCGCTTTCGATCAAGGAGGTTAAACAAGCTGCTAAGAGTGTCCGTGAATCGAATCGTCAGTTGCCTCTTGATCTGGCTACCGAAGAGAGAAAATCGGTCAGAAGACAGATAGATTCTTGGTCGAATGAAAGTCAGTCGGTTGAAAATAAGTCTAGGAAATTGCCTGAGAAGTAAGTGTTTTTGTTTCTCGATCTTGAAAGGTAGCTTATTGATGGTCGGCAGCTCTTTTAGATCCATTTTGAATGTTGGGTGAATGAGTTTTGTTATTATTCTGGTGTTTGCAGATTTGAGATGCTTTGTAAGTTCTTTTATAGTTTGGATTCTGCAATGCGGTTGTTGCGATGTAAAGGTGTCGCATCCAACTTCTCTAATGTTTGCCCTAAGGTCGAAGCCCTCACTGATAGGTACTGA TAACAATGGCGGACGCTTCAAAGAAAATTTCTTCTTCATCCTCATCAACTTTACCCTTCAAATTGAAGAAACCTTTGTGTTCTAACTTCAAATCTTTACTTGAGGATTCACAATCCTTGAGCTCCAAGACGCCGGAGAAGCCGGCGGAGCTCTCTACCAGATCTAGGAACCGTAAGGTTGCGCTTTCGATCAAGGAGGTTAAACAAGCTGCTAAGAGTGTCCGTGAATCGAATCGTCAGTTGCCTCTTGATCTGGCTACCGAAGAGAGAAAATCGGTCAGAAGACAGATAGATTCTTGGTCGAATGAAAGTCAGTCGGTTGAAAATAAGTCTAGGAAATTGCCTGAGAAATTTGAGATGCTTTGTAAGTTCTTTTATAGTTTGGATTCTGCAATGCGGTTGTTGCGATGTAAAGGTGTCGCATCCAACTTCTCTAATGTTTGCCCTAAGGTCGAAGCCCTCACTGATAGGTACTGA ATGGCGGACGCTTCAAAGAAAATTTCTTCTTCATCCTCATCAACTTTACCCTTCAAATTGAAGAAACCTTTGTGTTCTAACTTCAAATCTTTACTTGAGGATTCACAATCCTTGAGCTCCAAGACGCCGGAGAAGCCGGCGGAGCTCTCTACCAGATCTAGGAACCGTAAGGTTGCGCTTTCGATCAAGGAGGTTAAACAAGCTGCTAAGAGTGTCCGTGAATCGAATCGTCAGTTGCCTCTTGATCTGGCTACCGAAGAGAGAAAATCGGTCAGAAGACAGATAGATTCTTGGTCGAATGAAAGTCAGTCGGTTGAAAATAAGTCTAGGAAATTGCCTGAGAAATTTGAGATGCTTTGTAAGTTCTTTTATAGTTTGGATTCTGCAATGCGGTTGTTGCGATGTAAAGGTGTCGCATCCAACTTCTCTAATGTTTGCCCTAAGGTCGAAGCCCTCACTGATAGGTACTGA MADASKKISSSSSSTLPFKLKKPLCSNFKSLLEDSQSLSSKTPEKPAELSTRSRNRKVALSIKEVKQAAKSVRESNRQLPLDLATEERKSVRRQIDSWSNESQSVENKSRKLPEKFEMLCKFFYSLDSAMRLLRCKGVASNFSNVCPKVEALTDRY Homology
BLAST of IVF0009289 vs. ExPASy Swiss-Prot
Match: Q9SJW9 (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.2e-14 Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0
BLAST of IVF0009289 vs. ExPASy Swiss-Prot
Match: Q9M1S9 (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 6.2e-10 Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 0
BLAST of IVF0009289 vs. ExPASy TrEMBL
Match: A0A5D3BZJ0 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00950 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 3.7e-74 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0009289 vs. ExPASy TrEMBL
Match: A0A1S3CEP6 (CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103500097 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 3.7e-74 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0009289 vs. ExPASy TrEMBL
Match: A0A5D3DKW1 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00410 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60 Identity = 137/159 (86.16%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of IVF0009289 vs. ExPASy TrEMBL
Match: A0A5A7TNU2 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00640 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60 Identity = 137/159 (86.16%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of IVF0009289 vs. ExPASy TrEMBL
Match: A0A1S3C211 (CDT1-like protein b OS=Cucumis melo OX=3656 GN=LOC103495953 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60 Identity = 137/159 (86.16%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of IVF0009289 vs. NCBI nr
Match: KAA0051017.1 (CDT1-like protein b [Cucumis melo var. makuwa] >TYK04404.1 CDT1-like protein b [Cucumis melo var. makuwa]) HSP 1 Score: 283 bits (724), Expect = 1.20e-89 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0009289 vs. NCBI nr
Match: XP_008461526.1 (PREDICTED: CDT1-like protein b [Cucumis melo]) HSP 1 Score: 283 bits (724), Expect = 1.20e-89 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of IVF0009289 vs. NCBI nr
Match: KAA0043447.1 (CDT1-like protein b [Cucumis melo var. makuwa]) HSP 1 Score: 238 bits (608), Expect = 2.28e-72 Identity = 137/159 (86.16%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of IVF0009289 vs. NCBI nr
Match: XP_008455861.1 (PREDICTED: CDT1-like protein b [Cucumis melo] >TYK24234.1 CDT1-like protein b [Cucumis melo var. makuwa]) HSP 1 Score: 238 bits (608), Expect = 2.28e-72 Identity = 137/159 (86.16%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of IVF0009289 vs. NCBI nr
Match: XP_031744903.1 (uncharacterized protein LOC105436135 isoform X4 [Cucumis sativus]) HSP 1 Score: 192 bits (488), Expect = 1.41e-59 Identity = 115/156 (73.72%), Postives = 128/156 (82.05%), Query Frame = 0
BLAST of IVF0009289 vs. TAIR 10
Match: AT2G31270.1 (homolog of yeast CDT1 A ) HSP 1 Score: 79.7 bits (195), Expect = 2.3e-15 Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 0
BLAST of IVF0009289 vs. TAIR 10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B ) HSP 1 Score: 65.5 bits (158), Expect = 4.4e-11 Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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