IVF0009195 (gene) Melon (IVF77) v1

Overview


Name	IVF0009195
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	la-related protein 6A
Location	chr08: 1039010 .. 1043935 (+)
RNA-Seq Expression	IVF0009195
Synteny	IVF0009195

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGGAGGGCGTGAAGGTACTTTAGGTTCTTACCGCCTAACGCTTTTCTCCTCCTCACCATGGCCGGCGATGAGCCTCCGACTACGTCCTCCACCGCCGCAGTCTCTTCCCCCGTCGCCGACTCCATCCTCTCGCCCCCACCTCAAGATCCCGTCGGATCACCCAGTCGCGATGTGCCGGAGATTCAATCATTGATATCCAAAGACGATCATGACCAGGGATCCAGGGAGAATCGCGATCAGGGTCACGAACCCGCGGCGAAAGCGGCTGTTCTCCCTGAGGATCTGAAACAAAGGATTGTTAAGCAGGTAACTCTTCCGCCTCTCCCCTCCCCACTCTCCATCGTCCATCCCATTGAACCTCAAATTCTTTGCCTTTAGGTTTTGCCTGGTTTGCAATTTTTGGATTTGTGAATCAGTATGTAAATCCCTTTTTTTCGTCTTGCATATGTAATTTAATTGCTACATGTGACTTTTTGTATATATACTTGCATCGCTGAGTGCAAATATAAGAACGTTAGGAAGTTTATGGTTAGACCATCAACTACAAAGGGAGTTATGTGATCAATTGATCATTCCACGGGCGGGATATCATATATTTGATGCTTTGTTACGTCATTATTAGTATAGTCTTTTGATGTAAGACCTGAAGACAGCATTTAGATTTTGACAGTTGGATTTCAATTCATTCAGTTTTTTTTTATGATTTTGTTGAGTGTTTCAGTATGCCGTCGTCGTCTCATGATTGGTCTAAATATCTTCGCAGGTGGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGGTATGTTACTTGGGTAATGTTCACTTTTATGGAGATTTATATCTTTCAGAGGAAATGAAAACTCCCAGTAGTATTGACCGTTATAAGGTTGAACAGGTATAATAACTTACAAAAGAATTTGGTGTCTTTGGTTTTTTTTTTTGTCAAATTTTGAACTACTATCTGGAAGAATTTCCTCCCGAGCCAAACATAAAACAATTGAAATTAAGAAAGATTTAATGTACCTTTAATTGCCTTTTCTACTGTATGACTGTGGAAACTGAGAAGCTTTGATCGCTCTCATTTCACTGATACGATTTGCCTTAAAAATTCCAATATAGCTTTAGTAGACATTTTTAGTTTGTAGTCTAATTTGGTAGCTTCTTTTCTTCAAACATAGGAGTTGCTAAGAGTAATAATTTGGAAAAAGGATTCATTCTATGGAAATGCTTCAGGGAGTTATTTGTTAGGTCTTTTGCTGTGACTTCAATTCTTTAATCAATAAGCAAGGGTTTATTTTCAGATTTTAACTTTTAATCAATCAATTGTAGTATCAAACTCGAAACTAAAATTATTATTACAAAAGGAATGAAGCCTAACGGATGGCCTAGTTGTGAATGTGAATTCTTGGGTGTTCAATCATCTGAAACACCCTGTGATTACTTGACATATCTTGTTGATATGTTGATATAGAAGAGCTCAGGTGGTGGTCTTTCATGTTTTATTCATACTCGTATCTTTACTGTTTGCTCATTTCCCTTTTGTCTTTGTTCTTCTCTCTCTCTCTCTTTTTTAATTGTCCGTAGATTCTGATTTTCTGTAATATCTTGTAGCAACCAATTCTGTTATCAATGCACCAATAATTTGAAATTCATTTTCTCTTTATTTTTCTAGTTCCTATAGCTATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCGTTCATTTATCACTGCTGCACTGAGGGAATCCTCTGTTCTTGTAAGATACTTCATTCTTCCTTGTAAATATAGCAACCAATGCCTCTTTTTGCTTGATGCCACGAGCACATTTTAATTTACTTGCCAACCACAGGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCCGAGACTAGGGATTCTAAGGTATTTGCTTGTGTACTTGTGAAATTAACAATTGTTGTGTAACTTGAACTTATGGTAATTGATTACATTTCTATGTGGAGTATAGTTATTTACTATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAAAGAATTTTTGGAGTGGCTGGACGGTATGCCATTCCTGATTCCAAAACTATGTTTTCATGAAAATATTTCTCCATTCACACTTCCCTTGATGATTAATTTTTTATTTTTTATTTTTTGTATTTTTAGTATAAGAAGCATCACCATTTGTGACCCACATGTGGTAGACAAGTTGGGGAAAAGCAACAAGGGTGATGTGCTGATCAGTAATAAGGTAAATCTTGTAACCAGCTGATAGGAATAAAAAATTCAGTTTCTGATTAAAGGGGACATTGTGGTGATGCTCGTGCTTCCCATTTCAGCTCTCGTAATGATTCTGATGATTGTCTCACATTAACCATTAAAGAGTGTTGTCTCAATTTGTTTTCTTTTTCCGAAATCATCATATGTAGACTTCCTTCGTAGCAGGACTGACATTTATGAAAAGGTAGTTAGGAAATTTTTATAAAAAATTGAAGAAACATTTCCTTTCACCAGACTGAAATTTTGTTGAAAGTAGCATGTTGGGTCCTGAAGATAAGGAGGGAAGACTAATACAACATCAGTTTGATTGTGCAGGTGGAGAGAAAATTATAAGTGTGCACTGTTCAATACAGTATGTTGTATCCAATGTTTTAAGAGTGATGTATCCAATGTTTTTAATAACTATTGAGGCTTAAGTGTGGTTGGACTCTAACTTTTAGCCTCGAAACTTGCATCCTCCTGAAAACGCATTGAGACTTAAAATCTCCACACCCTGCCTAATATAGAGGTTTGATTAGAAAAACAATAGCGATTTGCCTTGTCCTTAAAAAATACAAGGGGCATTTCAGGCCTTCAGTTGGTTATTATGTTCTGTAGTTATTAATATTCTATGGGTTATAATAATCTGTGTTTGAGATGTATACTATTTTAGTATGAGTTAATGAAGAGGAGACAGTATGTATGGGAAATAATAAACACCGTCATAAAGAGATTTGAAATTAATTGTGGGTTACAATAGTTGGAAACACCAACTTCCAACTATTATAATTTGAAGCCAAAACAGTTCATGGATGTAGTAGTGTCCACCCAATTGAAGTTGGGGACCCAAACAGCCCCATAAAGGTTTGAGTTATGACAAGTTGAACTACTACTTCATTACCATGACTTTAAAATCATTCCAAACAATTTTATTGTATAAATGAATCCTCTTAATGATAATAGTAATGATGTTAAAGACATCATTTTAGAATCTTGTTTTAAGTAAAGATTGTGGGGCGACTTTTTTCTTTTCACTTTTATAATGACCATTATGTTTAGCAATACTTAATTATATCAATTTTAGATCTGCAAAATATTTTATATTAAATTTGTAGCTAACGCCTCTTACAGCCTTGCCTCTTCTAACGGAAAAGGCCTCTCTTTAGCTATTGAAAACATTCATGCAGCTATGCTTTGTCTCAGATTTCTTGACCTGAATTGAGTTACATTAAAAGATCAAACGAACTATGTTTACTCATTCCGCCTTTTTTCTTGGTCACTATAGTTGCATGCTCTAGTGGAGTATGAGACACTGGAGGCTTCGGAGAAAGCTGTGAGTAATCAGATATGTGCTCTATTTTCTTTAACTTGGTAATTATACCGTTTTTTATTTGATATCAATAATCGTTTTTCTGATTTTTCATTAGGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGGTACTGTATCTCATTTCACTTGCATTTTTTAAGTTGATTGTATTCTATTCACAATGTAGTTTTCAACTTCAGAGTAAACATGGCCAAAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAGCTGACCAGAATGGTCCTGACAAGAACATTCCTGTGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCCGAACGTTGTAAATGAGCATCATGACGGTGTGCCTGATGAGGAGGTTAATCTTGCTCTTGTGCTTTCTATTTCTGGGTGCTTCTTTTTGGGCACACATTTTGATCAAAATTTGTTCTTGAGTTCCCGTCATGTGTTGGTTATTCTCTTCCAACTCCCCTTGCAAGAAAATGGTTGTTGTGATTGATAACAAATAACAATATCAACTTTGCCAAATTTAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCAAAATCAAGGACGGACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTACCTACTGATCTGATCACGTTATCTTAAATTTCATGTTAACGAATTTTATCTTGATAATCTTTTGCTTACTTTGTAGGTCATGGAACTACAACTTCTACCCATCACATTGAACTTTCAAAACCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAATGAGAATTTGCATCAAGTGGGTCTGTAGAAATTTAACTTTTTATGTTTTTTACTTTGATTGATGGGCATGCTAGAACGCGTCCTGGTATATGTCTAAGTAGCTTGGCCAAAATGTATCTAACCTTGAAAGATTTGTGTCTTGAGGAAATGTTATCTTGTATATTGTTCACTTGTATGCTATGTTTAAATTTGGTGGTTTTGAATTTTCCAACTGAGTCTAATTAAAAATCAAATTCCTTTATTTAAAAATATGAAAACTGTTTATTTATTAGTTCGATAGGAAGGGGAATTTGAAATAGTAATATCTTCGTAGAGTATACTGCACTGTATTCGTATTGAGAAAAAATATGAAAAACG

mRNA sequence

AAACGGAGGGCGTGAAGGTACTTTAGGTTCTTACCGCCTAACGCTTTTCTCCTCCTCACCATGGCCGGCGATGAGCCTCCGACTACGTCCTCCACCGCCGCAGTCTCTTCCCCCGTCGCCGACTCCATCCTCTCGCCCCCACCTCAAGATCCCGTCGGATCACCCAGTCGCGATGTGCCGGAGATTCAATCATTGATATCCAAAGACGATCATGACCAGGGATCCAGGGAGAATCGCGATCAGGGTCACGAACCCGCGGCGAAAGCGGCTGTTCTCCCTGAGGATCTGAAACAAAGGATTGTTAAGCAGGTGGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGTTCCTATAGCTATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCGTTCATTTATCACTGCTGCACTGAGGGAATCCTCTGTTCTTGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCCGAGACTAGGGATTCTAAGTTATTTACTATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAAAGAATTTTTGGAGTGGCTGGACGTATAAGAAGCATCACCATTTGTGACCCACATGTGGTAGACAAGTTGGGGAAAAGCAACAAGGGTGATGTGCTGATCAGTAATAAGTTGCATGCTCTAGTGGAGTATGAGACACTGGAGGCTTCGGAGAAAGCTGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGAGTAAACATGGCCAAAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAGCTGACCAGAATGGTCCTGACAAGAACATTCCTGTGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCCGAACGTTGTAAATGAGCATCATGACGGTGTGCCTGATGAGGAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCAAAATCAAGGACGGACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTCATGGAACTACAACTTCTACCCATCACATTGAACTTTCAAAACCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAATGAGAATTTGCATCAAGTGGGTCTGTAGAAATTTAACTTTTTATGTTTTTTACTTTGATTGATGGGCATGCTAGAACGCGTCCTGGTATATGTCTAAGTAGCTTGGCCAAAATGTATCTAACCTTGAAAGATTTGTGTCTTGAGGAAATGTTATCTTGTATATTGTTCACTTGTATGCTATGTTTAAATTTGGTGGTTTTGAATTTTCCAACTGAGTCTAATTAAAAATCAAATTCCTTTATTTAAAAATATGAAAACTGTTTATTTATTAGTTCGATAGGAAGGGGAATTTGAAATAGTAATATCTTCGTAGAGTATACTGCACTGTATTCGTATTGAGAAAAAATATGAAAAACG

Coding sequence (CDS)

ATGGCCGGCGATGAGCCTCCGACTACGTCCTCCACCGCCGCAGTCTCTTCCCCCGTCGCCGACTCCATCCTCTCGCCCCCACCTCAAGATCCCGTCGGATCACCCAGTCGCGATGTGCCGGAGATTCAATCATTGATATCCAAAGACGATCATGACCAGGGATCCAGGGAGAATCGCGATCAGGGTCACGAACCCGCGGCGAAAGCGGCTGTTCTCCCTGAGGATCTGAAACAAAGGATTGTTAAGCAGGTGGAGTACTACTTCAGCGATGAAAACTTGCCCTCCGATAAATACTTGTTGGGATTAATCAAAAAGAACAAGGAGGGTTATGTTCCTATAGCTATTATTGCTTCCTTCAAGAGAATGAAGAAACTTACACACGATCGTTCATTTATCACTGCTGCACTGAGGGAATCCTCTGTTCTTGTCGTGAGTTCTAATGGGAAAAAAGTCAAGCGACTCCATCCTATTTCATTGCCCGAGACTAGGGATTCTAAGTTATTTACTATTTTGGTAGAAAATCTACCAGAGGATCATTCAGAGGAGAATATCAAAAGAATTTTTGGAGTGGCTGGACGTATAAGAAGCATCACCATTTGTGACCCACATGTGGTAGACAAGTTGGGGAAAAGCAACAAGGGTGATGTGCTGATCAGTAATAAGTTGCATGCTCTAGTGGAGTATGAGACACTGGAGGCTTCGGAGAAAGCTGTGGCTACTTTAAACGATGAACAAGATTGGAGAAATGGCATGCGGGTTAAGCCTCTTAAGCATATGAGTAAACATGGCCAAAGGAAACAACATTGGCGAGGACCTGAACCTGACAAAAACAGCAGTGGGAGAATAGCTGACCAGAATGGTCCTGACAAGAACATTCCTGTGCGAGTAACTGATCAGAACGGTGATGAAGAAATTCCGAACGTTGTAAATGAGCATCATGACGGTGTGCCTGATGAGGAGGAGGGCGATCATCAACACAAAGACAAGCATGGACATAGAGGTCAAAATCAAGGACGGACTAGAAGACAAAAGTACAAGGGTGTCAACGGAATGGGTCATGGAACTACAACTTCTACCCATCACATTGAACTTTCAAAACCACCCCCTGGTCCAAAAATGCCTGATGGAACTCGGGGGTTCACGATGGGGCGTGGGCGACCTCCAACCTCCAACCAAAGCATATAA

Protein sequence

MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRDQGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI

Homology

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BLAST of IVF0009195 vs. ExPASy Swiss-Prot
Match: Q94A38 (La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 6.2e-91
Identity = 205/403 (50.87%), Postives = 273/403 (67.74%), Query Frame = 0


Query: 11  STAAVSSPVADSILSPPPQDPVGSPSRD----VPEIQSLISKD---DHDQGSRENRDQGH 70
           +TA  S P   S L      PV   S D    V EI +L   D   DH++ S E+RDQ H
Sbjct: 29  ATADFSQP--QSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDH 88

Query: 71  ---EPAAKAAVLP-EDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASF 130
                     V+P ++L Q+I++QVEYYFSDENLP+DK+LL  +K+NK+G+VPI+ IA+F
Sbjct: 89  GENPVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATF 148

Query: 131 KRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDH 190
            +MKKLT D + I +AL+ESS LVVS++ KKVKRL P  LPE RD K+FT+LVENLPEDH
Sbjct: 149 HKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDH 208

Query: 191 SEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVA 250
           S ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA A
Sbjct: 209 SNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAA 268

Query: 251 TLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTD 310
           TLN+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   R   
Sbjct: 269 TLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR--- 328

Query: 311 QNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTS 370
                E  N    H D   D++ G+HQ KDK+G++G+  G+ RRQ ++G NG+GHGT +S
Sbjct: 329 -----EHQNHRLHHSDNPADDDGGNHQ-KDKNGNKGRVVGQGRRQNHQGGNGIGHGTASS 388

Query: 371 THH-----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS 394
           + H     +E+SK PPGP+MPDGTRGFTMGRG+   PPTS Q+
Sbjct: 389 SSHPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 418

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BLAST of IVF0009195 vs. ExPASy Swiss-Prot
Match: Q9LHL3 (La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.5e-44
Identity = 125/333 (37.54%), Postives = 183/333 (54.95%), Query Frame = 0


Query: 71  VLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRS 130
           +L +DL+ +IVKQVEY F+D +L +++ +   I K+ EGYVP++ IAS K++K LT +  
Sbjct: 139 LLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHH 198

Query: 131 FITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGV 190
            ++ ALR SS LVVS +GKKVKR    +  +  + +  T++ ENLP+DHS +N+++IFGV
Sbjct: 199 LVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGV 258

Query: 191 AGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATLNDEQDWRNG 250
            G +++I IC  H  +      KGD L+SNK+HAL+EY+    ++KAV  LNDE++WR G
Sbjct: 259 VGNVKAIRIC--HPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKLNDERNWRKG 318

Query: 251 MRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVN 310
           +RV+ L   S     K         +N  G + D   P              E+ P +  
Sbjct: 319 LRVRLLLRCSPKSVLKNR-------RNFDGILIDDELP---------SYESGEDSPRL-- 378

Query: 311 EHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGH----------GTTTSTH 370
            H      + +GD  +      +G+ +GR R  +   V G G           G  +   
Sbjct: 379 -HLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGS 438

Query: 371 HIELSKP---PPGPKMPDGTRGFTMGRGRPPTS 391
           H E S P     GP+MPDGTRGFTMGRG+P  S
Sbjct: 439 H-ESSSPKTATKGPRMPDGTRGFTMGRGKPSIS 449

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BLAST of IVF0009195 vs. ExPASy Swiss-Prot
Match: O80567 (La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-43
Identity = 135/390 (34.62%), Postives = 204/390 (52.31%), Query Frame = 0


Query: 45  LISK--DDHDQGSRENR-DQGHEPAAKAAV-----LPEDLKQRIVKQVEYYFSDENLPSD 104
           L+SK  D  D   RE++ DQ  E  A  ++     LPED  Q+IV QVEYYFSD NL + 
Sbjct: 154 LVSKKNDRRDHSKRESKNDQVTETGASVSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATT 213

Query: 105 KYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHP 164
            +L+  I K+ EGYVPI ++ASFK++K + ++ S + A L+ S+ L VS +GKKV+R+ P
Sbjct: 214 DHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISP 273

Query: 165 ISLPETRDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPH-----VVDKLGKS 224
           I+     + +   I+ ENLPEDH  +N+ +IF   G +++I  C P             +
Sbjct: 274 ITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSA 333

Query: 225 NKGD-VLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHW 284
            K D  L SNK+HA VEYE +E +E+AV  L++  +WR+G++V+  LKH +K  ++ Q  
Sbjct: 334 AKSDGTLFSNKVHAFVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQ-G 393

Query: 285 RGPEPDKNSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQ--HK 344
           RG +          D     +  P+     +   E    + E   G   E++G+ +   +
Sbjct: 394 RGRKGHDADVEHEEDDATTSEQQPIEKQSDDCSGEWDTHMQEQPIG---EDQGNEKAAGQ 453

Query: 345 DKHGHRGQNQGRTRRQKYKGV------------NGMGHGTTTSTHHIEL----------- 388
            K  +RG+ +GR R Q ++              N  G G     HH ++           
Sbjct: 454 RKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNN 513

[Close]

BLAST of IVF0009195 vs. ExPASy Swiss-Prot
Match: Q05CL8 (La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 1.5e-20
Identity = 62/164 (37.80%), Postives = 96/164 (58.54%), Query Frame = 0


Query: 80  IVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRES 139
           I KQV+++F D NL  DK+L   I+K+++GYV I+++ SF +MKKLT D   I  AL+ S
Sbjct: 32  IAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSS 91

Query: 140 SVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITI 199
           SV+ +   G +++R  P+     +D +  T+ VE LP++ +   I+R+FG  G +  I+I
Sbjct: 92  SVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI 151

Query: 200 CDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATLND 244
             PH        + GD     K  A VE+ET E + KA+  LN+
Sbjct: 152 --PHY------KSTGD----PKGFAFVEFETKEQAAKAIEFLNN 182

[Close]

BLAST of IVF0009195 vs. ExPASy Swiss-Prot
Match: Q5XI01 (La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 3.4e-20
Identity = 61/164 (37.20%), Postives = 96/164 (58.54%), Query Frame = 0


Query: 80  IVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRES 139
           I KQV+++F D NL  D++L   I+K+++GYV I+++ SF +MKKLT D   I  AL+ S
Sbjct: 33  IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSS 92

Query: 140 SVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITI 199
           SV+ +   G +++R  P+     +D +  T+ VE LP++ +   I+R+FG  G +  I+I
Sbjct: 93  SVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI 152

Query: 200 CDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATLND 244
             PH        + GD     K  A VE+ET E + KA+  LN+
Sbjct: 153 --PHY------KSTGD----PKGFAFVEFETKEQAAKAIEFLNN 183

[Close]

BLAST of IVF0009195 vs. ExPASy TrEMBL
Match: A0A1S3AYU2 (la-related protein 6A OS=Cucumis melo OX=3656 GN=LOC103484374 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.4e-218
Identity = 390/394 (98.98%), Postives = 392/394 (99.49%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLIS+DDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60

Query: 61  QGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPA KAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNK DVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGP+KNIPVRVTDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH
Sbjct: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394

[Close]

BLAST of IVF0009195 vs. ExPASy TrEMBL
Match: A0A5D3CMV4 (La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008960 PE=4 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 1.5e-217
Identity = 391/394 (99.24%), Postives = 391/394 (99.24%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60

Query: 61  QGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPAAKAAVLPEDLKQRI   VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAAKAAVLPEDLKQRI---VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH
Sbjct: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 391

[Close]

BLAST of IVF0009195 vs. ExPASy TrEMBL
Match: A0A5A7UBI5 (La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001510 PE=4 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 1.8e-213
Identity = 391/418 (93.54%), Postives = 391/418 (93.54%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60

Query: 61  QGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPAAKAAVLPEDLKQRI   VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAAKAAVLPEDLKQRI---VEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDK 300
           LNDEQDWRNGMRVKPLKHM                        SKHGQRKQHWRGPEPDK
Sbjct: 241 LNDEQDWRNGMRVKPLKHMVLYLISLAFFKLIVFYSQCSFQLQSKHGQRKQHWRGPEPDK 300

Query: 301 NSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN 360
           NSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN
Sbjct: 301 NSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN 360

Query: 361 QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 415

[Close]

BLAST of IVF0009195 vs. ExPASy TrEMBL
Match: A0A0A0KI36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523320 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.1e-202
Identity = 367/395 (92.91%), Postives = 377/395 (95.44%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSIL-SPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENR 60
           M+GDEPPTTSS       VADSIL SPPPQDPVGSPS DVP+IQ LIS+DDHDQGSRE+ 
Sbjct: 1   MSGDEPPTTSS-------VADSILSSPPPQDPVGSPSLDVPDIQPLISEDDHDQGSRESH 60

Query: 61  DQGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASF 120
           DQGHEPA +AAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGL+KKNKEGYVPIAIIASF
Sbjct: 61  DQGHEPAVRAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLVKKNKEGYVPIAIIASF 120

Query: 121 KRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDH 180
           KRM+KLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDH
Sbjct: 121 KRMRKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDH 180

Query: 181 SEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVA 240
           SEEN+KRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNKLHALVEYETLEASEKAVA
Sbjct: 181 SEENMKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVA 240

Query: 241 TLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQ 300
           TLNDEQDWRNGMRVKPLK MSKHGQRKQHWRGPEPDK SSGRIADQNGPDKNIP RVTDQ
Sbjct: 241 TLNDEQDWRNGMRVKPLKLMSKHGQRKQHWRGPEPDKTSSGRIADQNGPDKNIPGRVTDQ 300

Query: 301 NGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST 360
           NG+EEIPNVVNEHHD VPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST
Sbjct: 301 NGNEEIPNVVNEHHDDVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST 360

Query: 361 HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 395
           HHIELSKPPPGPKMPDGTRGFTMGRGRPPTS QSI
Sbjct: 361 HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSTQSI 388

[Close]

BLAST of IVF0009195 vs. ExPASy TrEMBL
Match: A0A6J1IUP2 (la-related protein 6A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111478735 PE=4 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 4.7e-174
Identity = 320/391 (81.84%), Postives = 350/391 (89.51%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60
           MAGDEPP +S    +SS V++SI SPP QDPVGSPSRDVPEIQSL S+DDHDQG RE+  
Sbjct: 1   MAGDEPPISSYPDVISSSVSESIPSPPRQDPVGSPSRDVPEIQSLASEDDHDQGLREH-- 60

Query: 61  QGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
             H+ A KAAVL EDLK+RI+KQVEYYFSDENLP+DK+LLGLIKKNK+G+VPIAIIA+FK
Sbjct: 61  --HDHAVKAAVLSEDLKRRIIKQVEYYFSDENLPTDKHLLGLIKKNKDGFVPIAIIAAFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLT D +FITAALRESSVLVVSSNGKKVKRLHPI LPETRD K+FTILVENLPEDHS
Sbjct: 121 RMKKLTQDHTFITAALRESSVLVVSSNGKKVKRLHPIPLPETRDPKVFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAG IRSIT+ DPH+VDK+GKS+KGDVLISNKLHALVEYE+LEA EKAVAT
Sbjct: 181 EENIKRIFGVAGHIRSITVYDPHMVDKMGKSSKGDVLISNKLHALVEYESLEACEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300
           LNDE DWRNGMRVKPLKH+SKHGQRKQHWRGP+PDKN + R ADQNGPDKN   R+TDQN
Sbjct: 241 LNDEHDWRNGMRVKPLKHLSKHGQRKQHWRGPDPDKNFTWRTADQNGPDKNSSGRITDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEI N + EHHD VPDEEE D+QHKDKHG+RG+NQGRTRRQKYK VNG GHG TTS H
Sbjct: 301 GDEEIQN-ITEHHDDVPDEEEVDYQHKDKHGNRGRNQGRTRRQKYKSVNGTGHGITTSAH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSN 392
           HIELSKPPPGPKMPDGTRGFTMGRGRP TS+
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPLTSS 386

[Close]

BLAST of IVF0009195 vs. NCBI nr
Match: XP_008439642.1 (PREDICTED: la-related protein 6A [Cucumis melo])

HSP 1 Score: 767 bits (1981), Expect = 2.30e-279
Identity = 390/394 (98.98%), Postives = 392/394 (99.49%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLIS+DDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISEDDHDQGSRENRD 60

Query: 61  QGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPA KAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAVKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNK DVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKSDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGP+KNIPVRVTDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPNKNIPVRVTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH
Sbjct: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394

[Close]

BLAST of IVF0009195 vs. NCBI nr
Match: TYK13277.1 (la-related protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 764 bits (1972), Expect = 4.83e-278
Identity = 391/394 (99.24%), Postives = 391/394 (99.24%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60

Query: 61  QGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPAAKAAVLPEDLKQRIV   EYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAAKAAVLPEDLKQRIV---EYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH
Sbjct: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 391

[Close]

BLAST of IVF0009195 vs. NCBI nr
Match: KAA0052548.1 (la-related protein 6A [Cucumis melo var. makuwa])

HSP 1 Score: 750 bits (1937), Expect = 2.58e-272
Identity = 391/418 (93.54%), Postives = 391/418 (93.54%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60
           MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD
Sbjct: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60

Query: 61  QGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
           QGHEPAAKAAVLPEDLKQRIV   EYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK
Sbjct: 61  QGHEPAAKAAVLPEDLKQRIV---EYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS
Sbjct: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHM------------------------SKHGQRKQHWRGPEPDK 300
           LNDEQDWRNGMRVKPLKHM                        SKHGQRKQHWRGPEPDK
Sbjct: 241 LNDEQDWRNGMRVKPLKHMVLYLISLAFFKLIVFYSQCSFQLQSKHGQRKQHWRGPEPDK 300

Query: 301 NSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN 360
           NSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN
Sbjct: 301 NSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQN 360

Query: 361 QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394
           QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI
Sbjct: 361 QGRTRRQKYKGVNGMGHGTTTSTHHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 415

[Close]

BLAST of IVF0009195 vs. NCBI nr
Match: XP_004134576.1 (la-related protein 6A [Cucumis sativus] >KGN49390.1 hypothetical protein Csa_002950 [Cucumis sativus])

HSP 1 Score: 714 bits (1844), Expect = 1.39e-258
Identity = 367/395 (92.91%), Postives = 377/395 (95.44%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILS-PPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENR 60
           M+GDEPPTTSS       VADSILS PPPQDPVGSPS DVP+IQ LIS+DDHDQGSRE+ 
Sbjct: 1   MSGDEPPTTSS-------VADSILSSPPPQDPVGSPSLDVPDIQPLISEDDHDQGSRESH 60

Query: 61  DQGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASF 120
           DQGHEPA +AAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGL+KKNKEGYVPIAIIASF
Sbjct: 61  DQGHEPAVRAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLVKKNKEGYVPIAIIASF 120

Query: 121 KRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDH 180
           KRM+KLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRD KLFTILVENLPEDH
Sbjct: 121 KRMRKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDH 180

Query: 181 SEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVA 240
           SEEN+KRIFGVAGRIRSITICDPHVVDKLGKS+KGDVLISNKLHALVEYETLEASEKAVA
Sbjct: 181 SEENMKRIFGVAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVA 240

Query: 241 TLNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQ 300
           TLNDEQDWRNGMRVKPLK MSKHGQRKQHWRGPEPDK SSGRIADQNGPDKNIP RVTDQ
Sbjct: 241 TLNDEQDWRNGMRVKPLKLMSKHGQRKQHWRGPEPDKTSSGRIADQNGPDKNIPGRVTDQ 300

Query: 301 NGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST 360
           NG+EEIPNVVNEHHD VPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST
Sbjct: 301 NGNEEIPNVVNEHHDDVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTST 360

Query: 361 HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQSI 394
           HHIELSKPPPGPKMPDGTRGFTMGRGRPPTS QSI
Sbjct: 361 HHIELSKPPPGPKMPDGTRGFTMGRGRPPTSTQSI 388

[Close]

BLAST of IVF0009195 vs. NCBI nr
Match: XP_038882123.1 (la-related protein 6A [Benincasa hispida])

HSP 1 Score: 701 bits (1809), Expect = 3.60e-253
Identity = 356/392 (90.82%), Postives = 372/392 (94.90%), Query Frame = 0


Query: 1   MAGDEPPTTSSTAAVSSPVADSILSPPPQDPVGSPSRDVPEIQSLISKDDHDQGSRENRD 60
           MAGDEPPTTSS AAVSS VA+SILSPPP+DPVGSPSRDVPE QSLIS+DDHDQG RE+ D
Sbjct: 1   MAGDEPPTTSSNAAVSSSVAESILSPPPRDPVGSPSRDVPETQSLISEDDHDQGPRESHD 60

Query: 61  QGHEPAAKAAVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFK 120
            GHEPA K AVLPEDLKQRIVKQVEYYFSDENLP+DK+LLGLIKKNKEG+VPIAIIA+FK
Sbjct: 61  HGHEPAVKPAVLPEDLKQRIVKQVEYYFSDENLPTDKHLLGLIKKNKEGFVPIAIIAAFK 120

Query: 121 RMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHS 180
           RMKKLT D SFITAALRESSVLV+SSNGKKVKRLHPI LPETRD KLFTILVENLPEDHS
Sbjct: 121 RMKKLTQDHSFITAALRESSVLVISSNGKKVKRLHPIPLPETRDPKLFTILVENLPEDHS 180

Query: 181 EENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVAT 240
           EENIKRIFG AGRIRSITICDPHVV+KLGKS+KGDVLISNKLHALVEYETLEASEKAVAT
Sbjct: 181 EENIKRIFGAAGRIRSITICDPHVVEKLGKSSKGDVLISNKLHALVEYETLEASEKAVAT 240

Query: 241 LNDEQDWRNGMRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQN 300
           LNDEQDWRNGMRVKPLKH+SKHGQRKQHWRGP+PDKNS+GRI DQ+GPDKNIP R TDQN
Sbjct: 241 LNDEQDWRNGMRVKPLKHLSKHGQRKQHWRGPDPDKNSTGRITDQSGPDKNIPGRTTDQN 300

Query: 301 GDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTH 360
           GDEEI NV NEHHD VPDEEEGDHQHKDKHGHRG+NQGRTRRQKYKGVNGMGHGTTTS H
Sbjct: 301 GDEEIHNV-NEHHDDVPDEEEGDHQHKDKHGHRGRNQGRTRRQKYKGVNGMGHGTTTSAH 360

Query: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ 392
           HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ
Sbjct: 361 HIELSKPPPGPKMPDGTRGFTMGRGRPPTSNQ 391

[Close]

BLAST of IVF0009195 vs. TAIR 10
Match: AT5G46250.1 (RNA-binding protein )

HSP 1 Score: 335.9 bits (860), Expect = 4.4e-92
Identity = 205/403 (50.87%), Postives = 273/403 (67.74%), Query Frame = 0


Query: 11  STAAVSSPVADSILSPPPQDPVGSPSRD----VPEIQSLISKD---DHDQGSRENRDQGH 70
           +TA  S P   S L      PV   S D    V EI +L   D   DH++ S E+RDQ H
Sbjct: 29  ATADFSQP--QSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDH 88

Query: 71  ---EPAAKAAVLP-EDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASF 130
                     V+P ++L Q+I++QVEYYFSDENLP+DK+LL  +K+NK+G+VPI+ IA+F
Sbjct: 89  GENPVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATF 148

Query: 131 KRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDH 190
            +MKKLT D + I +AL+ESS LVVS++ KKVKRL P  LPE RD K+FT+LVENLPEDH
Sbjct: 149 HKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDH 208

Query: 191 SEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVA 250
           S ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA A
Sbjct: 209 SNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAA 268

Query: 251 TLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTD 310
           TLN+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   R   
Sbjct: 269 TLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR--- 328

Query: 311 QNGDEEIPNVVNEHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTS 370
                E  N    H D   D++ G+HQ KDK+G++G+  G+ RRQ ++G NG+GHGT +S
Sbjct: 329 -----EHQNHRLHHSDNPADDDGGNHQ-KDKNGNKGRVVGQGRRQNHQGGNGIGHGTASS 388

Query: 371 THH-----IELSKPPPGPKMPDGTRGFTMGRGR---PPTSNQS 394
           + H     +E+SK PPGP+MPDGTRGFTMGRG+   PPTS Q+
Sbjct: 389 SSHPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 418

[Close]

BLAST of IVF0009195 vs. TAIR 10
Match: AT5G46250.2 (RNA-binding protein )

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-69
Identity = 160/324 (49.38%), Postives = 212/324 (65.43%), Query Frame = 0


Query: 11  STAAVSSPVADSILSPPPQDPVGSPSRD----VPEIQSLISKD---DHDQGSRENRDQGH 70
           +TA  S P   S L      PV   S D    V EI +L   D   DH++ S E+RDQ H
Sbjct: 29  ATADFSQP--QSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDH 88

Query: 71  ---EPAAKAAVLP-EDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASF 130
                     V+P ++L Q+I++QVEYYFSDENLP+DK+LL  +K+NK+G+VPI+ IA+F
Sbjct: 89  GENPVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATF 148

Query: 131 KRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDH 190
            +MKKLT D + I +AL+ESS LVVS++ KKVKRL P  LPE RD K+FT+LVENLPEDH
Sbjct: 149 HKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDH 208

Query: 191 SEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVA 250
           S ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKA A
Sbjct: 209 SNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAA 268

Query: 251 TLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTD 310
           TLN+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   R   
Sbjct: 269 TLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR--- 328

Query: 311 QNGDEEIPNVVNEHHDGVPDEEEG 323
                E  N    H D   D+ +G
Sbjct: 329 -----EHQNHRLHHSDNPADDVKG 340

[Close]

BLAST of IVF0009195 vs. TAIR 10
Match: AT5G46250.3 (RNA-binding protein )

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-69
Identity = 160/324 (49.38%), Postives = 212/324 (65.43%), Query Frame = 0


Query: 11  STAAVSSPVADSILSPPPQDPVGSPSRD----VPEIQSLISKD---DHDQGSRENRDQGH 70
           +TA  S P   S L      PV   S D    V EI +L   D   DH++ S E+RDQ H
Sbjct: 29  ATADFSQP--QSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDH 88

Query: 71  ---EPAAKAAVLP-EDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASF 130
                     V+P ++L Q+I++QVEYYFSDENLP+DK+LL  +K+NK+G+VPI+ IA+F
Sbjct: 89  GENPVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATF 148

Query: 131 KRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDH 190
            +MKKLT D + I +AL+ESS LVVS++ KKVKRL P  LPE RD K+FT+LVENLPEDH
Sbjct: 149 HKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSP--LPEIRDPKIFTVLVENLPEDH 208

Query: 191 SEENIKRIFGVAGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVA 250
           S ENI+ IFG AG I+S++ICDP+ V++  K  K +  I  +LHA VEYET+EA+EKAV 
Sbjct: 209 SNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAVT 268

Query: 251 TLNDEQDWRNGMRVKPLKHMS-KHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTD 310
           TLN+EQDWRNG+RVK L+  + K  QR+   R  + +K+++GR+ DQ G +KN   R   
Sbjct: 269 TLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTR--- 328

Query: 311 QNGDEEIPNVVNEHHDGVPDEEEG 323
                E  N    H D   D+ +G
Sbjct: 329 -----EHQNHRLHHSDNPADDVKG 340

[Close]

BLAST of IVF0009195 vs. TAIR 10
Match: AT3G19090.1 (RNA-binding protein )

HSP 1 Score: 179.5 bits (454), Expect = 5.3e-45
Identity = 125/333 (37.54%), Postives = 183/333 (54.95%), Query Frame = 0


Query: 71  VLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRS 130
           +L +DL+ +IVKQVEY F+D +L +++ +   I K+ EGYVP++ IAS K++K LT +  
Sbjct: 139 LLSDDLRLKIVKQVEYQFTDMSLLANESISKHISKDPEGYVPVSYIASTKKIKALTSNHH 198

Query: 131 FITAALRESSVLVVSSNGKKVKRLHPISLPETRDSKLFTILVENLPEDHSEENIKRIFGV 190
            ++ ALR SS LVVS +GKKVKR    +  +  + +  T++ ENLP+DHS +N+++IFGV
Sbjct: 199 LVSLALRSSSKLVVSEDGKKVKRTSQFTDRDREELQGRTVVAENLPDDHSYQNLEKIFGV 258

Query: 191 AGRIRSITICDPHVVDKLGKSNKGDVLISNKLHALVEYETLEASEKAVATLNDEQDWRNG 250
            G +++I IC  H  +      KGD L+SNK+HAL+EY+    ++KAV  LNDE++WR G
Sbjct: 259 VGNVKAIRIC--HPPESNSSRPKGDFLMSNKIHALIEYDNTVIADKAVEKLNDERNWRKG 318

Query: 251 MRVKPLKHMSKHGQRKQHWRGPEPDKNSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVN 310
           +RV+ L   S     K         +N  G + D   P              E+ P +  
Sbjct: 319 LRVRLLLRCSPKSVLKNR-------RNFDGILIDDELP---------SYESGEDSPRL-- 378

Query: 311 EHHDGVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGH----------GTTTSTH 370
            H      + +GD  +      +G+ +GR R  +   V G G           G  +   
Sbjct: 379 -HLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGS 438

Query: 371 HIELSKP---PPGPKMPDGTRGFTMGRGRPPTS 391
           H E S P     GP+MPDGTRGFTMGRG+P  S
Sbjct: 439 H-ESSSPKTATKGPRMPDGTRGFTMGRGKPSIS 449

[Close]

BLAST of IVF0009195 vs. TAIR 10
Match: AT2G43970.1 (RNA-binding protein )

HSP 1 Score: 177.6 bits (449), Expect = 2.0e-44
Identity = 135/390 (34.62%), Postives = 204/390 (52.31%), Query Frame = 0


Query: 45  LISK--DDHDQGSRENR-DQGHEPAAKAAV-----LPEDLKQRIVKQVEYYFSDENLPSD 104
           L+SK  D  D   RE++ DQ  E  A  ++     LPED  Q+IV QVEYYFSD NL + 
Sbjct: 154 LVSKKNDRRDHSKRESKNDQVTETGASVSIDSKTGLPEDSIQKIVNQVEYYFSDLNLATT 213

Query: 105 KYLLGLIKKNKEGYVPIAIIASFKRMKKLTHDRSFITAALRESSVLVVSSNGKKVKRLHP 164
            +L+  I K+ EGYVPI ++ASFK++K + ++ S + A L+ S+ L VS +GKKV+R+ P
Sbjct: 214 DHLMRFICKDPEGYVPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISP 273

Query: 165 ISLPETRDSKLFTILVENLPEDHSEENIKRIFGVAGRIRSITICDPH-----VVDKLGKS 224
           I+     + +   I+ ENLPEDH  +N+ +IF   G +++I  C P             +
Sbjct: 274 ITESAIEELQSRIIVAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSA 333

Query: 225 NKGD-VLISNKLHALVEYETLEASEKAVATLNDEQDWRNGMRVK-PLKHMSKHGQRKQHW 284
            K D  L SNK+HA VEYE +E +E+AV  L++  +WR+G++V+  LKH +K  ++ Q  
Sbjct: 334 AKSDGTLFSNKVHAFVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQ-G 393

Query: 285 RGPEPDKNSSGRIADQNGPDKNIPVRVTDQNGDEEIPNVVNEHHDGVPDEEEGDHQ--HK 344
           RG +          D     +  P+     +   E    + E   G   E++G+ +   +
Sbjct: 394 RGRKGHDADVEHEEDDATTSEQQPIEKQSDDCSGEWDTHMQEQPIG---EDQGNEKAAGQ 453

Query: 345 DKHGHRGQNQGRTRRQKYKGV------------NGMGHGTTTSTHHIEL----------- 388
            K  +RG+ +GR R Q ++              N  G G     HH ++           
Sbjct: 454 RKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNN 513

The following BLAST results are available for this feature:

BLAST of IVF0009195 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A38	6.2e-91	50.87	La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1	[more]
Q9LHL3	7.5e-44	37.54	La-related protein 6C OS=Arabidopsis thaliana OX=3702 GN=LARP6C PE=3 SV=1	[more]
O80567	2.8e-43	34.62	La-related protein 6B OS=Arabidopsis thaliana OX=3702 GN=LARP6B PE=1 SV=2	[more]
Q05CL8	1.5e-20	37.80	La-related protein 7 OS=Mus musculus OX=10090 GN=Larp7 PE=1 SV=2	[more]
Q5XI01	3.4e-20	37.20	La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2	[more]

BLAST of IVF0009195 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AYU2	1.4e-218	98.98	la-related protein 6A OS=Cucumis melo OX=3656 GN=LOC103484374 PE=4 SV=1	[more]
A0A5D3CMV4	1.5e-217	99.24	La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25...	[more]
A0A5A7UBI5	1.8e-213	93.54	La-related protein 6A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold12...	[more]
A0A0A0KI36	1.1e-202	92.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523320 PE=4 SV=1	[more]
A0A6J1IUP2	4.7e-174	81.84	la-related protein 6A-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11147873...	[more]

BLAST of IVF0009195 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439642.1	2.30e-279	98.98	PREDICTED: la-related protein 6A [Cucumis melo]	[more]
TYK13277.1	4.83e-278	99.24	la-related protein 6A [Cucumis melo var. makuwa]	[more]
KAA0052548.1	2.58e-272	93.54	la-related protein 6A [Cucumis melo var. makuwa]	[more]
XP_004134576.1	1.39e-258	92.91	la-related protein 6A [Cucumis sativus] >KGN49390.1 hypothetical protein Csa_002...	[more]
XP_038882123.1	3.60e-253	90.82	la-related protein 6A [Benincasa hispida]	[more]

BLAST of IVF0009195 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46250.1	4.4e-92	50.87	RNA-binding protein	[more]
AT5G46250.2	5.3e-69	49.38	RNA-binding protein	[more]
AT5G46250.3	5.3e-69	49.38	RNA-binding protein	[more]
AT3G19090.1	5.3e-45	37.54	RNA-binding protein	[more]
AT2G43970.1	2.0e-44	34.62	RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 140..153 score: 27.92 coord: 83..100 score: 65.15 coord: 109..124 score: 42.05
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 169..254 e-value: 0.0016 score: 27.7
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 170..243 e-value: 8.7E-7 score: 28.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 168..254 score: 9.865582
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 74..154 e-value: 3.4E-41 score: 152.9
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 80..138 e-value: 6.2E-26 score: 90.2
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 70..161 score: 28.27177
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 65..160 e-value: 1.0E-31 score: 110.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 161..266 e-value: 1.3E-10 score: 43.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..330
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 5..389
None	No IPR available	PANTHER	PTHR22792:SF102	LA-RELATED PROTEIN 6A	coord: 5..389
None	No IPR available	CDD	cd08033	LARP_6	coord: 77..153 e-value: 6.30105E-36 score: 124.317
IPR034878	Plant La-related protein, RNA recognition motif	CDD	cd12288	RRM_La_like_plant	coord: 168..256 e-value: 1.12695E-37 score: 129.559
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 71..163
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 155..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0009195.2	IVF0009195.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005844	polysome
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding