IVF0008991 (gene) Melon (IVF77) v1

Overview
NameIVF0008991
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPlant transposase
Locationchr05: 10866324 .. 10866640 (-)
RNA-Seq ExpressionIVF0008991
SyntenyIVF0008991
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAACAAATTCAATCAACTTCCAATAATGAAGAGCTTAGTAAAATGAAGCCATCCAATATACAATCTAGGCAAGATTGGATGGGCTTTTCGAAAGAAAATAAAAGTGCACGGTTCAAGGTAAGTCAATGCAGCCATTTGTTGAAAAAGACACATATAAGTACAATTTATGTTTGATGATTAACCCATTTATATTTGATTAGGCTGAAAGTGCAAAGTTCAAATCAATGAAGAAGAGGCAACTTCTACATACATGTAGCCGTAAATGTTATGCTCGATTGGCAGAAGATATGGTATTCATTATTCTAAATTAA

mRNA sequence

ATGGTGAAACAAATTCAATCAACTTCCAATAATGAAGAGCTTAGTAAAATGAAGCCATCCAATATACAATCTAGGCAAGATTGGATGGGCTTTTCGAAAGAAAATAAAAGTGCACGGTTCAAGGCTGAAAGTGCAAAGTTCAAATCAATGAAGAAGAGGCAACTTCTACATACATGTAGCCGTAAATGTTATGCTCGATTGGCAGAAGATATGGTATTCATTATTCTAAATTAA

Coding sequence (CDS)

ATGGTGAAACAAATTCAATCAACTTCCAATAATGAAGAGCTTAGTAAAATGAAGCCATCCAATATACAATCTAGGCAAGATTGGATGGGCTTTTCGAAAGAAAATAAAAGTGCACGGTTCAAGGCTGAAAGTGCAAAGTTCAAATCAATGAAGAAGAGGCAACTTCTACATACATGTAGCCGTAAATGTTATGCTCGATTGGCAGAAGATATGGTATTCATTATTCTAAATTAA

Protein sequence

MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCSRKCYARLAEDMVFIILN
Homology
BLAST of IVF0008991 vs. ExPASy TrEMBL
Match: A0A5D3E4I4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00020 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.8e-22
Identity = 62/71 (87.32%), Postives = 63/71 (88.73%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVKQIQSTSNNEELSKMKPSNIQS QDWM F KE KS  FKAESAKFKSMKKRQL HTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDWMDFVKEKKSGWFKAESAKFKSMKKRQLPHTCS 60

Query: 61 RKCYARLAEDM 72
          RK YARLAED+
Sbjct: 61 RKGYARLAEDI 71

BLAST of IVF0008991 vs. ExPASy TrEMBL
Match: A0A5A7U615 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00240 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.7e-22
Identity = 62/71 (87.32%), Postives = 63/71 (88.73%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVK+IQSTSN EELSKMKPSNIQS QDWM F KE K ARFKAESAKFKSMKKRQL HTCS
Sbjct: 12 MVKKIQSTSNYEELSKMKPSNIQSTQDWMDFVKEKKIARFKAESAKFKSMKKRQLPHTCS 71

Query: 61 RKCYARLAEDM 72
          RK YARLAEDM
Sbjct: 72 RKGYARLAEDM 82

BLAST of IVF0008991 vs. ExPASy TrEMBL
Match: A0A5A7U5B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00120 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21
Identity = 61/71 (85.92%), Postives = 63/71 (88.73%), Query Frame = 0

Query: 1   MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
           MVKQIQSTSNN+ELSKMK SNIQS QDWM F KE KSARFKAESAKFKSMKKRQL HTCS
Sbjct: 150 MVKQIQSTSNNKELSKMKSSNIQSTQDWMDFVKEKKSARFKAESAKFKSMKKRQLPHTCS 209

Query: 61  RKCYARLAEDM 72
            K YARLAED+
Sbjct: 210 CKGYARLAEDL 220

BLAST of IVF0008991 vs. ExPASy TrEMBL
Match: A0A5D3C765 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G001660 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVK+IQSTSN EELSKMKPSNIQS Q WM F KE K ARFKAESAKFKSMKKRQL HTCS
Sbjct: 12 MVKKIQSTSNYEELSKMKPSNIQSTQYWMDFVKEKKIARFKAESAKFKSMKKRQLPHTCS 71

Query: 61 RKCYARLAEDM 72
          RK YARLAEDM
Sbjct: 72 RKGYARLAEDM 82

BLAST of IVF0008991 vs. ExPASy TrEMBL
Match: A0A5D3BIW8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold507G00250 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVKQIQSTSNNEELSKMKPSNIQS QD M F  E KS RFKAESAKFKSMKKR+L HTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDLMDFVNEKKSKRFKAESAKFKSMKKRKLPHTCS 60

Query: 61 RKCYARLAEDM 72
          RK YARLAEDM
Sbjct: 61 RKGYARLAEDM 71

BLAST of IVF0008991 vs. NCBI nr
Match: TYK30814.1 (uncharacterized protein E5676_scaffold455G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 114 bits (284), Expect = 3.93e-31
Identity = 62/71 (87.32%), Postives = 63/71 (88.73%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVKQIQSTSNNEELSKMKPSNIQS QDWM F KE KS  FKAESAKFKSMKKRQL HTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDWMDFVKEKKSGWFKAESAKFKSMKKRQLPHTCS 60

Query: 61 RKCYARLAEDM 71
          RK YARLAED+
Sbjct: 61 RKGYARLAEDI 71

BLAST of IVF0008991 vs. NCBI nr
Match: KAA0051313.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 113 bits (282), Expect = 3.68e-28
Identity = 62/71 (87.32%), Postives = 63/71 (88.73%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVK+IQSTSN EELSKMKPSNIQS QDWM F KE K ARFKAESAKFKSMKKRQL HTCS
Sbjct: 12 MVKKIQSTSNYEELSKMKPSNIQSTQDWMDFVKEKKIARFKAESAKFKSMKKRQLPHTCS 71

Query: 61 RKCYARLAEDM 71
          RK YARLAEDM
Sbjct: 72 RKGYARLAEDM 82

BLAST of IVF0008991 vs. NCBI nr
Match: TYJ98641.1 (uncharacterized protein E5676_scaffold507G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 109 bits (273), Expect = 5.90e-28
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVKQIQSTSNNEELSKMKPSNIQS QD M F  E KS RFKAESAKFKSMKKR+L HTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDLMDFVNEKKSKRFKAESAKFKSMKKRKLPHTCS 60

Query: 61 RKCYARLAEDM 71
          RK YARLAEDM
Sbjct: 61 RKGYARLAEDM 71

BLAST of IVF0008991 vs. NCBI nr
Match: KAA0047447.1 (uncharacterized protein E6C27_scaffold498G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 109 bits (273), Expect = 1.09e-27
Identity = 61/71 (85.92%), Postives = 62/71 (87.32%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVKQIQSTSNNEELSKMKPSNIQS QD M F  E KS RFKAESAKFKSMKKR+L HTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKPSNIQSTQDLMDFVNEKKSKRFKAESAKFKSMKKRKLPHTCS 60

Query: 61 RKCYARLAEDM 71
          RK YARLAEDM
Sbjct: 61 RKGYARLAEDM 71

BLAST of IVF0008991 vs. NCBI nr
Match: KAA0055644.1 (uncharacterized protein E6C27_scaffold181G00090 [Cucumis melo var. makuwa] >TYK09898.1 uncharacterized protein E5676_scaffold16G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (269), Expect = 1.45e-27
Identity = 60/71 (84.51%), Postives = 60/71 (84.51%), Query Frame = 0

Query: 1  MVKQIQSTSNNEELSKMKPSNIQSRQDWMGFSKENKSARFKAESAKFKSMKKRQLLHTCS 60
          MVKQIQSTSNNEELSKMK SNIQS QDWM F KE KSARFKA SAKFKSMKKRQ  HTCS
Sbjct: 1  MVKQIQSTSNNEELSKMKSSNIQSMQDWMDFLKEKKSARFKAVSAKFKSMKKRQFPHTCS 60

Query: 61 RKCYARLAEDM 71
           K Y RLAEDM
Sbjct: 61 CKGYVRLAEDM 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E4I42.8e-2287.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U6154.7e-2287.32Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G002... [more]
A0A5A7U5B01.8e-2185.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C7655.2e-2185.92Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00... [more]
A0A5D3BIW85.2e-2185.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK30814.13.93e-3187.32uncharacterized protein E5676_scaffold455G00020 [Cucumis melo var. makuwa][more]
KAA0051313.13.68e-2887.32Plant transposase [Cucumis melo var. makuwa][more]
TYJ98641.15.90e-2885.92uncharacterized protein E5676_scaffold507G00250 [Cucumis melo var. makuwa][more]
KAA0047447.11.09e-2785.92uncharacterized protein E6C27_scaffold498G00490 [Cucumis melo var. makuwa][more]
KAA0055644.11.45e-2784.51uncharacterized protein E6C27_scaffold181G00090 [Cucumis melo var. makuwa] >TYK0... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008991.1IVF0008991.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane