IVF0008126 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAAGGTTATGAAGAAGGCCCGAATGGCCCTTCTCCTCAGCATATCGAGCATCCCCTTCCTCCTCCTCCTACCCAACATCCTTTTTCTCCTCTTGGGGACAACGGTTGCTCCATCGCATCTATGGAGCAGCCTATTCAAACTGATAGACCTTGGGCGACGTGTGATTGCAGCCAGTATGTACATCGCTTGGAAGGGAGATTAGATCAGATGGAGGATTTCTTACTTAGAATAGAGTCATCCGTTTCAGTCGAGTTATCAGCCATAAAGAAGCTTCTGATGACATTGGTTAAGGTATTATTATTATTCGCGTGGAACTTTTTATTATTTTTATCTTTATTAAGTATTAGTCCTTACTTATGTTTCTCCTACTTTGTTAATAAGATAAGGCAGTTGACTCCCAACTCTGCTATAATAGTGGTGAAGGTACATTATTCAATGGACCAGGAGCTGAGACTTTAGTTGGCGATGTATTCATAGATGTTCCCACTCCGATCACTGATGACAGTCTGCTGACGAGGAGATGAGAACATCCATAAGTAACGACCTCAGAGATGGTATCATATCAATCGATGTACCATCAGAGGGTAAGGATGTGCCACCACCGCCGCCCCAACCCATGCTAAAGCCGAAGGTTAGGTAA ATGATGAAAGGTTATGAAGAAGGCCCGAATGGCCCTTCTCCTCAGCATATCGAGCATCCCCTTCCTCCTCCTCCTACCCAACATCCTTTTTCTCCTCTTGGGGACAACGGTTGCTCCATCGCATCTATGGAGCAGCCTATTCAAACTGATAGACCTTGGGCGACGTGTGATTGCAGCCAGTATGTACATCGCTTGGAAGGGAGATTAGATCAGATGGAGGATTTCTTACTTAGAATAGAGTCATCCGTTTCAGTCGAGTTATCAGCCATAAAGAAGCTTCTGATGACATTGGTTAAGTCTGCTGACGAGGAGATGAGAACATCCATAAGTAACGACCTCAGAGATGGTATCATATCAATCGATGTACCATCAGAGGGTAAGGATGTGCCACCACCGCCGCCCCAACCCATGCTAAAGCCGAAGGTTAGGTAA ATGATGAAAGGTTATGAAGAAGGCCCGAATGGCCCTTCTCCTCAGCATATCGAGCATCCCCTTCCTCCTCCTCCTACCCAACATCCTTTTTCTCCTCTTGGGGACAACGGTTGCTCCATCGCATCTATGGAGCAGCCTATTCAAACTGATAGACCTTGGGCGACGTGTGATTGCAGCCAGTATGTACATCGCTTGGAAGGGAGATTAGATCAGATGGAGGATTTCTTACTTAGAATAGAGTCATCCGTTTCAGTCGAGTTATCAGCCATAAAGAAGCTTCTGATGACATTGGTTAAGTCTGCTGACGAGGAGATGAGAACATCCATAAGTAACGACCTCAGAGATGGTATCATATCAATCGATGTACCATCAGAGGGTAAGGATGTGCCACCACCGCCGCCCCAACCCATGCTAAAGCCGAAGGTTAGGTAA MMKGYEEGPNGPSPQHIEHPLPPPPTQHPFSPLGDNGCSIASMEQPIQTDRPWATCDCSQYVHRLEGRLDQMEDFLLRIESSVSVELSAIKKLLMTLVKSADEEMRTSISNDLRDGIISIDVPSEGKDVPPPPPQPMLKPKVR Homology
BLAST of IVF0008126 vs. ExPASy TrEMBL
Match: A0A5D3BBM3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00170 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.4e-72 Identity = 143/157 (91.08%), Postives = 143/157 (91.08%), Query Frame = 0
BLAST of IVF0008126 vs. ExPASy TrEMBL
Match: A0A0A0KIM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 9.4e-16 Identity = 67/184 (36.41%), Postives = 85/184 (46.20%), Query Frame = 0
BLAST of IVF0008126 vs. ExPASy TrEMBL
Match: A0A5D3DTQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold7319G00070 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 5.2e-14 Identity = 56/134 (41.79%), Postives = 68/134 (50.75%), Query Frame = 0
BLAST of IVF0008126 vs. ExPASy TrEMBL
Match: A0A5D3DVB6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00020 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.8e-11 Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0
BLAST of IVF0008126 vs. ExPASy TrEMBL
Match: A0A5A7ULC4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001230 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.8e-11 Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of IVF0008126 vs. NCBI nr
Match: KAA0063468.1 (hypothetical protein E6C27_scaffold977G00560 [Cucumis melo var. makuwa] >TYJ95758.1 hypothetical protein E5676_scaffold110G00170 [Cucumis melo var. makuwa]) HSP 1 Score: 278 bits (711), Expect = 2.89e-92 Identity = 143/157 (91.08%), Postives = 143/157 (91.08%), Query Frame = 0
BLAST of IVF0008126 vs. NCBI nr
Match: TYK26892.1 (hypothetical protein E5676_scaffold7319G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 85.1 bits (209), Expect = 1.14e-16 Identity = 56/134 (41.79%), Postives = 68/134 (50.75%), Query Frame = 0
BLAST of IVF0008126 vs. NCBI nr
Match: TYK27676.1 (uncharacterized protein E5676_scaffold225G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 79.3 bits (194), Expect = 1.81e-15 Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0
BLAST of IVF0008126 vs. NCBI nr
Match: KAA0055984.1 (uncharacterized protein E6C27_scaffold319G001230 [Cucumis melo var. makuwa]) HSP 1 Score: 79.3 bits (194), Expect = 1.81e-15 Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of IVF0008126 vs. NCBI nr
Match: KAA0048759.1 (hypothetical protein E6C27_scaffold43G00670 [Cucumis melo var. makuwa] >TYK31574.1 hypothetical protein E5676_scaffold172G00680 [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 1.58e-13 Identity = 63/165 (38.18%), Postives = 80/165 (48.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|