IVF0007979 (gene) Melon (IVF77) v1

Overview


Name	IVF0007979
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	PRA1 family protein
Location	chr04: 31967255 .. 31967944 (-)
RNA-Seq Expression	IVF0007979
Synteny	IVF0007979

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCACCGTCGTCCCCGCCCCCACATCTGGTGGTTCTGTTCAATCTCAAGGCCCTGTCACCACCCCCGCCTTTCGCGCTTTCATTAACCACCTATCCGAATATCTCCGTCACGGTCTCTCCCAGCGTAGACCATGGGCTGAACTTGCAGATCGGACGGCATTTTCTAAGCCTGAATCCTTCTCCGAAGCCACCCTTCGAATTCGCAAGAATTACTCTTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTCGGCTTTTCCCTCGTTTCTCATCCGTTTTCTCTCATCCTTCTGGCCGGTCTTTTATCCTCGTGGCTATTTCTCTATCTCTTCCGTCCGTCAGATCAGCCCCTTGTTCTATTTGGTCGCACATTCAAGGATAGCGAAACCCTAATTCTCCTGGTTGTTTCAGCGTTTTCGTCATATTCCTCACGAGCGTTGGATCGGTCCTCGTTTCGGCTCTTATGGTCGGTGTAGCTTTGGTTTGTGCCCACGGCGCGTTTAGGGTTCCTGAAGATCTCTTCCTAGATGAACAAGAAAATGTATCCACCGGTTTCCTCTCGTTCTTCAGCAGCGCAGCTTCCACCGCTGCCGCCGCCGCCGCGCCTGTGGCTGCTCGCACGTGATTTGAGTAGATGA

mRNA sequence

ATGTCTTCCTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCACCGTCGTCCCCGCCCCCACATCTGGTGGTTCTGTTCAATCTCAAGGCCCTGTCACCACCCCCGCCTTTCGCGCTTTCATTAACCACCTATCCGAATATCTCCGTCACGGTCTCTCCCAGCGTAGACCATGGGCTGAACTTGCAGATCGGACGGCATTTTCTAAGCCTGAATCCTTCTCCGAAGCCACCCTTCGAATTCGCAAGAATTACTCTTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTCGGCTTTTCCCTCGTTTCTCATCCGTTTTCTCTCATCCTTCTGGCCGGTCTTTTATCCTCGTGGCTATTTCTCTATCTCTTCCGTCCGTCAGATCAGCCCCTTGTTCTATTTGGTCGCACATTCAAGGATAGCGAAACCCTAATTCTCCTGGTTGTTTCAGCGTTTTCGTCATATTCCTCACGAGCGTTGGATCGGTCCTCGTTTCGGCTCTTATGGTCGAAAATGTATCCACCGGTTTCCTCTCGTTCTTCAGCAGCGCAGCTTCCACCGCTGCCGCCGCCGCCGCGCCTGTGGCTGCTCGCACGTGATTTGAGTAGATGA

Coding sequence (CDS)

ATGTCTTCCTCCTCTCCGGCCATACTTCCCATCTCCAATCCTCAATCCACCGTCGTCCCCGCCCCCACATCTGGTGGTTCTGTTCAATCTCAAGGCCCTGTCACCACCCCCGCCTTTCGCGCTTTCATTAACCACCTATCCGAATATCTCCGTCACGGTCTCTCCCAGCGTAGACCATGGGCTGAACTTGCAGATCGGACGGCATTTTCTAAGCCTGAATCCTTCTCCGAAGCCACCCTTCGAATTCGCAAGAATTACTCTTATTTTCGCGTCAATTATCTCGCTGTGGTTGCTCTGATCCTCGGCTTTTCCCTCGTTTCTCATCCGTTTTCTCTCATCCTTCTGGCCGGTCTTTTATCCTCGTGGCTATTTCTCTATCTCTTCCGTCCGTCAGATCAGCCCCTTGTTCTATTTGGTCGCACATTCAAGGATAGCGAAACCCTAATTCTCCTGGTTGTTTCAGCGTTTTCGTCATATTCCTCACGAGCGTTGGATCGGTCCTCGTTTCGGCTCTTATGGTCGAAAATGTATCCACCGGTTTCCTCTCGTTCTTCAGCAGCGCAGCTTCCACCGCTGCCGCCGCCGCCGCGCCTGTGGCTGCTCGCACGTGATTTGAGTAGATGA

Protein sequence

MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSWLFLYLFRPSDQPLVLFGRTFKDSETLILLVVSAFSSYSSRALDRSSFRLLWSKMYPPVSSRSSAAQLPPLPPPPRLWLLARDLSR

Homology

[Close]

BLAST of IVF0007979 vs. ExPASy Swiss-Prot
Match: O80915 (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.2e-50
Identity = 101/153 (66.01%), Postives = 126/153 (82.35%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           M+SS+P +LPISNPQ+    AP+   SV+SQ P+ TPAFR FIN ++E +++GLS+RRPW
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPS---SVESQPPIATPAFRNFINQITETVKNGLSKRRPW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AELADR+A SKPES S+A +RIRKNYSYF+VNYL V   I+GFSLV+HPFSL+ L  LL+
Sbjct: 61  AELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 154
           SWLFLYLFRP+DQP+VLFGRTF D ETL  L++
Sbjct: 121 SWLFLYLFRPTDQPIVLFGRTFSDRETLGCLIL 150

[Close]

BLAST of IVF0007979 vs. ExPASy Swiss-Prot
Match: Q9LYN0 (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.2e-42
Identity = 87/151 (57.62%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 4   SSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAEL 63
           ++P  LP++N Q           +VQSQ P+ TPAFR F + LS  +R GLSQRRPW EL
Sbjct: 2   ATPPTLPVTNQQ-----------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSWL 123
            DR++ ++PES ++A  RIRKN +YF+VNY+A+V+L+L FSL SHP SL++L GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVVS 155
           FLYLFRPSDQPLV+FGRTF D ETL+ LV+S
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLS 141

[Close]

BLAST of IVF0007979 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-41
Identity = 87/152 (57.24%), Postives = 116/152 (76.32%), Query Frame = 0


Query: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62
           SSSPAILP++N Q+          + QSQ P+ + AFR F++ LS  LR  LSQRRPW E
Sbjct: 2   SSSPAILPVTNQQA----------ATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLE 61

Query: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSW 122
           L DR++F++P+S +++  RIRKN +YF+VNY A+V+L+L FSL+SHPFSL++L  LL SW
Sbjct: 62  LVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSW 121

Query: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVVS 155
           +FLYLFR SDQPLVLFGR+F D ETL+ LV++
Sbjct: 122 MFLYLFRSSDQPLVLFGRSFSDRETLLGLVLT 143

[Close]

BLAST of IVF0007979 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.0e-39
Identity = 85/150 (56.67%), Postives = 110/150 (73.33%), Query Frame = 0


Query: 4   SSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAEL 63
           ++P  LPIS+          SGG  QSQ PV+TPAFR F++ LS  +R  LSQRRPW EL
Sbjct: 3   ANPPTLPISD---------HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLEL 62

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSWL 123
            DR+A S+PES ++A  RIR+N  YF+VNY+ +V+L+L  SL+SHPFSL++L  L  +W+
Sbjct: 63  VDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWI 122

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVV 154
           FLYLFRPSDQPLV+ GRTF D ETL +LV+
Sbjct: 123 FLYLFRPSDQPLVVLGRTFSDRETLGVLVI 143

[Close]

BLAST of IVF0007979 vs. ExPASy Swiss-Prot
Match: Q9M012 (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.2e-38
Identity = 90/158 (56.96%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQS-TVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRP 60
           M S++P +LPIS   + T    P     V+SQ PV     RAF+N ++E +  GLS+ RP
Sbjct: 1   MVSTNPPVLPISTTATDTTNQPPIVTAVVESQPPVV----RAFVNGVTETVCGGLSRSRP 60

Query: 61  WAELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLL 120
           W+EL DR+AF+KP+S SEA  R RKN SYFRVNY+ +VALILGFSL++HPFSLILL  L 
Sbjct: 61  WSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLA 120

Query: 121 SSWLFLYLFRPSDQPLVLFGRTFKDSETLILLVVSAFS 158
           +SWLFLYLFRPSD+PL+LFGR+F + ETL  L++S  +
Sbjct: 121 ASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIA 154

[Close]

BLAST of IVF0007979 vs. ExPASy TrEMBL
Match: A0A5A7TRJ0 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00460 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW
Sbjct: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 154
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153

[Close]

BLAST of IVF0007979 vs. ExPASy TrEMBL
Match: A0A1S3B5J4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103486257 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW
Sbjct: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 154
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153

[Close]

BLAST of IVF0007979 vs. ExPASy TrEMBL
Match: A0A0A0LF69 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G730850 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.6e-75
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW
Sbjct: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAV+ALILGFSLVSHPFSLILLAGLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 154
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153

[Close]

BLAST of IVF0007979 vs. ExPASy TrEMBL
Match: A0A6J1DYL3 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111025780 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.0e-67
Identity = 139/150 (92.67%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62
           SSSPAILPISNPQST   A  SGGSVQSQGPVTTPAFR FINHLSE LRHGLSQRRPWAE
Sbjct: 2   SSSPAILPISNPQSTATVAAASGGSVQSQGPVTTPAFRVFINHLSESLRHGLSQRRPWAE 61

Query: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSW 122
           +ADRTAFSKPES SEATLRIRKNY+YFRVNYLAV+ALILGFSLVSHPFSLILLAGLLSSW
Sbjct: 62  VADRTAFSKPESLSEATLRIRKNYTYFRVNYLAVIALILGFSLVSHPFSLILLAGLLSSW 121

Query: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLV 153
           LFLYLFRPSDQPLVLFGRTFKDSETLILLV
Sbjct: 122 LFLYLFRPSDQPLVLFGRTFKDSETLILLV 151

[Close]

BLAST of IVF0007979 vs. ExPASy TrEMBL
Match: A0A6J1G9U3 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111452114 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.0e-67
Identity = 139/153 (90.85%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           M+SSSPAILPISNPQS  VPA  SGGSVQSQ PVTTPAFRAFINHL+E LRHGLSQ+R W
Sbjct: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AE+ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSL+LL GLLS
Sbjct: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 154
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLV+
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVL 153

[Close]

BLAST of IVF0007979 vs. NCBI nr
Match: XP_008442368.1 (PREDICTED: PRA1 family protein B4 [Cucumis melo] >KAA0044201.1 PRA1 family protein B4 [Cucumis melo var. makuwa] >TYK24931.1 PRA1 family protein B4 [Cucumis melo var. makuwa])

HSP 1 Score: 291 bits (744), Expect = 7.62e-97
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW
Sbjct: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153

[Close]

BLAST of IVF0007979 vs. NCBI nr
Match: XP_004137695.1 (PRA1 family protein B4 [Cucumis sativus] >KGN58721.1 hypothetical protein Csa_000715 [Cucumis sativus])

HSP 1 Score: 290 bits (743), Expect = 1.08e-96
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW
Sbjct: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAV+ALILGFSLVSHPFSLILLAGLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153

[Close]

BLAST of IVF0007979 vs. NCBI nr
Match: XP_038906050.1 (PRA1 family protein B4-like [Benincasa hispida])

HSP 1 Score: 280 bits (715), Expect = 1.97e-92
Identity = 147/153 (96.08%), Postives = 149/153 (97.39%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           MSSSSPAILPISNPQST VPA  SGGS+QSQGPVTTPAFRAFINHLSEYLRHGLSQRR W
Sbjct: 1   MSSSSPAILPISNPQSTAVPAAASGGSLQSQGPVTTPAFRAFINHLSEYLRHGLSQRRSW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAV+ALILGFSLVSHPFSLILLAGLLS
Sbjct: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVIALILGFSLVSHPFSLILLAGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153

[Close]

BLAST of IVF0007979 vs. NCBI nr
Match: XP_022159363.1 (PRA1 family protein B4-like [Momordica charantia])

HSP 1 Score: 265 bits (676), Expect = 1.62e-86
Identity = 139/150 (92.67%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62
           SSSPAILPISNPQST   A  SGGSVQSQGPVTTPAFR FINHLSE LRHGLSQRRPWAE
Sbjct: 2   SSSPAILPISNPQSTATVAAASGGSVQSQGPVTTPAFRVFINHLSESLRHGLSQRRPWAE 61

Query: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSW 122
           +ADRTAFSKPES SEATLRIRKNY+YFRVNYLAV+ALILGFSLVSHPFSLILLAGLLSSW
Sbjct: 62  VADRTAFSKPESLSEATLRIRKNYTYFRVNYLAVIALILGFSLVSHPFSLILLAGLLSSW 121

Query: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLV 152
           LFLYLFRPSDQPLVLFGRTFKDSETLILLV
Sbjct: 122 LFLYLFRPSDQPLVLFGRTFKDSETLILLV 151

[Close]

BLAST of IVF0007979 vs. NCBI nr
Match: XP_022948430.1 (PRA1 family protein B4-like [Cucurbita moschata] >XP_023540814.1 PRA1 family protein B4-like [Cucurbita pepo subsp. pepo] >KAG6596327.1 PRA1 family protein B4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264 bits (675), Expect = 2.38e-86
Identity = 139/153 (90.85%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           M+SSSPAILPISNPQS  VPA  SGGSVQSQ PVTTPAFRAFINHL+E LRHGLSQ+R W
Sbjct: 1   MASSSPAILPISNPQSGTVPAAASGGSVQSQAPVTTPAFRAFINHLTESLRHGLSQQRSW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AE+ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSL+LL GLLS
Sbjct: 61  AEVADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLLLLVGLLS 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 153
           SWLFLYLFRPSDQPLVLFGRTFKDSETLILLV+
Sbjct: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVL 153

[Close]

BLAST of IVF0007979 vs. TAIR 10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4 )

HSP 1 Score: 198.4 bits (503), Expect = 5.8e-51
Identity = 101/153 (66.01%), Postives = 126/153 (82.35%), Query Frame = 0


Query: 1   MSSSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPW 60
           M+SS+P +LPISNPQ+    AP+   SV+SQ P+ TPAFR FIN ++E +++GLS+RRPW
Sbjct: 1   MASSAPPVLPISNPQTVPSAAPS---SVESQPPIATPAFRNFINQITETVKNGLSKRRPW 60

Query: 61  AELADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLS 120
           AELADR+A SKPES S+A +RIRKNYSYF+VNYL V   I+GFSLV+HPFSL+ L  LL+
Sbjct: 61  AELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLA 120

Query: 121 SWLFLYLFRPSDQPLVLFGRTFKDSETLILLVV 154
           SWLFLYLFRP+DQP+VLFGRTF D ETL  L++
Sbjct: 121 SWLFLYLFRPTDQPIVLFGRTFSDRETLGCLIL 150

[Close]

BLAST of IVF0007979 vs. TAIR 10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 87/151 (57.62%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 4   SSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAEL 63
           ++P  LP++N Q           +VQSQ P+ TPAFR F + LS  +R GLSQRRPW EL
Sbjct: 2   ATPPTLPVTNQQ-----------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSWL 123
            DR++ ++PES ++A  RIRKN +YF+VNY+A+V+L+L FSL SHP SL++L GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVVS 155
           FLYLFRPSDQPLV+FGRTF D ETL+ LV+S
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLS 141

[Close]

BLAST of IVF0007979 vs. TAIR 10
Match: AT3G56110.2 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 87/151 (57.62%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 4   SSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAEL 63
           ++P  LP++N Q           +VQSQ P+ TPAFR F + LS  +R GLSQRRPW EL
Sbjct: 2   ATPPTLPVTNQQ-----------AVQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTEL 61

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSWL 123
            DR++ ++PES ++A  RIRKN +YF+VNY+A+V+L+L FSL SHP SL++L GLL  W+
Sbjct: 62  IDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWM 121

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVVS 155
           FLYLFRPSDQPLV+FGRTF D ETL+ LV+S
Sbjct: 122 FLYLFRPSDQPLVVFGRTFSDRETLLALVLS 141

[Close]

BLAST of IVF0007979 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 87/152 (57.24%), Postives = 116/152 (76.32%), Query Frame = 0


Query: 3   SSSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAE 62
           SSSPAILP++N Q+          + QSQ P+ + AFR F++ LS  LR  LSQRRPW E
Sbjct: 2   SSSPAILPVTNQQA----------ATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLE 61

Query: 63  LADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSW 122
           L DR++F++P+S +++  RIRKN +YF+VNY A+V+L+L FSL+SHPFSL++L  LL SW
Sbjct: 62  LVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSW 121

Query: 123 LFLYLFRPSDQPLVLFGRTFKDSETLILLVVS 155
           +FLYLFR SDQPLVLFGR+F D ETL+ LV++
Sbjct: 122 MFLYLFRSSDQPLVLFGRSFSDRETLLGLVLT 143

[Close]

BLAST of IVF0007979 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 )

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-41
Identity = 85/150 (56.67%), Postives = 110/150 (73.33%), Query Frame = 0


Query: 4   SSPAILPISNPQSTVVPAPTSGGSVQSQGPVTTPAFRAFINHLSEYLRHGLSQRRPWAEL 63
           ++P  LPIS+          SGG  QSQ PV+TPAFR F++ LS  +R  LSQRRPW EL
Sbjct: 3   ANPPTLPISD---------HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLEL 62

Query: 64  ADRTAFSKPESFSEATLRIRKNYSYFRVNYLAVVALILGFSLVSHPFSLILLAGLLSSWL 123
            DR+A S+PES ++A  RIR+N  YF+VNY+ +V+L+L  SL+SHPFSL++L  L  +W+
Sbjct: 63  VDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWI 122

Query: 124 FLYLFRPSDQPLVLFGRTFKDSETLILLVV 154
           FLYLFRPSDQPLV+ GRTF D ETL +LV+
Sbjct: 123 FLYLFRPSDQPLVVLGRTFSDRETLGVLVI 143

The following BLAST results are available for this feature:

BLAST of IVF0007979 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80915	8.2e-50	66.01	PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1	[more]
Q9LYN0	2.2e-42	57.62	PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1	[more]
Q9SIY7	2.4e-41	57.24	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
Q9FLB6	1.0e-39	56.67	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]
Q9M012	4.2e-38	56.96	PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1	[more]

BLAST of IVF0007979 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRJ0	2.0e-75	100.00	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G...	[more]
A0A1S3B5J4	2.0e-75	100.00	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103486257 PE=3 SV=1	[more]
A0A0A0LF69	2.6e-75	99.35	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G730850 PE=3 SV=1	[more]
A0A6J1DYL3	2.0e-67	92.67	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111025780 PE=3 SV=1	[more]
A0A6J1G9U3	2.0e-67	90.85	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111452114 PE=3 SV=1	[more]

BLAST of IVF0007979 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442368.1	7.62e-97	100.00	PREDICTED: PRA1 family protein B4 [Cucumis melo] >KAA0044201.1 PRA1 family prote...	[more]
XP_004137695.1	1.08e-96	99.35	PRA1 family protein B4 [Cucumis sativus] >KGN58721.1 hypothetical protein Csa_00...	[more]
XP_038906050.1	1.97e-92	96.08	PRA1 family protein B4-like [Benincasa hispida]	[more]
XP_022159363.1	1.62e-86	92.67	PRA1 family protein B4-like [Momordica charantia]	[more]
XP_022948430.1	2.38e-86	90.85	PRA1 family protein B4-like [Cucurbita moschata] >XP_023540814.1 PRA1 family pro...	[more]

BLAST of IVF0007979 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38360.1	5.8e-51	66.01	prenylated RAB acceptor 1.B4	[more]
AT3G56110.1	1.5e-43	57.62	prenylated RAB acceptor 1.B1	[more]
AT3G56110.2	1.5e-43	57.62	prenylated RAB acceptor 1.B1	[more]
AT2G40380.1	1.7e-42	57.24	prenylated RAB acceptor 1.B2	[more]
AT5G05380.1	7.1e-41	56.67	prenylated RAB acceptor 1.B3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 54..156 e-value: 5.6E-33 score: 113.6
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR19317:SF34	PRA1 FAMILY PROTEIN-RELATED	coord: 1..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007979.1	IVF0007979.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane