IVF0007932 (gene) Melon (IVF77) v1

Overview


Name	IVF0007932
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Codeine O-demethylase-like
Location	chr05: 18651058 .. 18651306 (+)
RNA-Seq Expression	IVF0007932
Synteny	IVF0007932

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAGTCAGATTCGAGTAAAAATGTGTTGCAAATGTCCATCAATGGCGATGAACCCCCGCCAGCTTACGTGGTCGAAGGCTGTGCAGTCGGCGGTGCCGGGGAGATTCCGATCATCGACGTGGGAGTGTTTATGCCGTCCTCGTCGCCGGAACCAGAGGTTTTGGACTCGGAATTGGGAAAATTGAGATCTGCTCTCGCCAAGGAGGGATGCTTTCAGGTTTTGATTTCCTTTCCATTCCTCTGA

mRNA sequence

ATGTCTCAGTCAGATTCGAGTAAAAATGTGTTGCAAATGTCCATCAATGGCGATGAACCCCCGCCAGCTTACGTGGTCGAAGGCTGTGCAGTCGGCGGTGCCGGGGAGATTCCGATCATCGACGTGGGAGTGTTTATGCCGTCCTCGTCGCCGGAACCAGAGGTTTTGGACTCGGAATTGGGAAAATTGAGATCTGCTCTCGCCAAGGAGGGATGCTTTCAGGTTTTGATTTCCTTTCCATTCCTCTGA

Coding sequence (CDS)

ATGTCTCAGTCAGATTCGAGTAAAAATGTGTTGCAAATGTCCATCAATGGCGATGAACCCCCGCCAGCTTACGTGGTCGAAGGCTGTGCAGTCGGCGGTGCCGGGGAGATTCCGATCATCGACGTGGGAGTGTTTATGCCGTCCTCGTCGCCGGAACCAGAGGTTTTGGACTCGGAATTGGGAAAATTGAGATCTGCTCTCGCCAAGGAGGGATGCTTTCAGGTTTTGATTTCCTTTCCATTCCTCTGA

Protein sequence

MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSELGKLRSALAKEGCFQVLISFPFL

Homology

[Close]

BLAST of IVF0007932 vs. ExPASy TrEMBL
Match: A0A5D3CD57 (Codeine O-demethylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00500 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.5e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60
          MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL
Sbjct: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60

Query: 61 GKLRSALAKEGCFQVLISFPFL 83
          GKLRSALAKEGCFQVLISFPFL
Sbjct: 61 GKLRSALAKEGCFQVLISFPFL 82

[Close]

BLAST of IVF0007932 vs. ExPASy TrEMBL
Match: A0A1S3BNU3 (codeine O-demethylase-like OS=Cucumis melo OX=3656 GN=LOC103492112 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60
          MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL
Sbjct: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60

Query: 61 GKLRSALAKEGCFQVL 77
          GKLRSALAKEGCFQ +
Sbjct: 61 GKLRSALAKEGCFQAI 76

[Close]

BLAST of IVF0007932 vs. ExPASy TrEMBL
Match: A0A0A0LGY4 (DIOX_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070275 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.3e-29
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 1  MSQ--SDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDS 60
          MSQ  SDS+KNVLQMSINGDEPPPAY+VEG A+GGAGEIPIIDVGVF+PSSSPEPE LDS
Sbjct: 1  MSQCASDSTKNVLQMSINGDEPPPAYIVEGSAIGGAGEIPIIDVGVFLPSSSPEPEALDS 60

Query: 61 ELGKLRSALAKEGCFQVL 77
          ELGKLRSALAKEGCFQ +
Sbjct: 61 ELGKLRSALAKEGCFQAI 78

[Close]

BLAST of IVF0007932 vs. ExPASy TrEMBL
Match: A0A6J1HQK7 (codeine O-demethylase-like OS=Cucurbita maxima OX=3661 GN=LOC111465790 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27
Identity = 65/76 (85.53%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60
          MS SDS+KNVLQMS++GDEPP AYVVE  AVGGAGEIPIIDVGVF+PSSSPEPEVLDSEL
Sbjct: 3  MSPSDSTKNVLQMSVDGDEPPRAYVVEDSAVGGAGEIPIIDVGVFLPSSSPEPEVLDSEL 62

Query: 61 GKLRSALAKEGCFQVL 77
          GKLRSAL+KEGCFQ +
Sbjct: 63 GKLRSALSKEGCFQAI 78

[Close]

BLAST of IVF0007932 vs. ExPASy TrEMBL
Match: A0A6J1FB89 (codeine O-demethylase-like OS=Cucurbita moschata OX=3662 GN=LOC111444057 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.1e-27
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60
          +S SDS+KNVLQMS++GDEPP AYVVE  AVGGAGEIPIIDVGVF+PSSSPEP+VLDSEL
Sbjct: 3  ISPSDSTKNVLQMSVDGDEPPRAYVVEDSAVGGAGEIPIIDVGVFLPSSSPEPQVLDSEL 62

Query: 61 GKLRSALAKEGCFQVL 77
          GKLRSALAKEGCFQ +
Sbjct: 63 GKLRSALAKEGCFQAI 78

[Close]

BLAST of IVF0007932 vs. NCBI nr
Match: KAA0047620.1 (codeine O-demethylase-like [Cucumis melo var. makuwa] >TYK08276.1 codeine O-demethylase-like [Cucumis melo var. makuwa])

HSP 1 Score: 165 bits (417), Expect = 3.01e-51
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60
          MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL
Sbjct: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60

Query: 61 GKLRSALAKEGCFQVLISFPFL 82
          GKLRSALAKEGCFQVLISFPFL
Sbjct: 61 GKLRSALAKEGCFQVLISFPFL 82

[Close]

BLAST of IVF0007932 vs. NCBI nr
Match: XP_008450549.1 (PREDICTED: codeine O-demethylase-like [Cucumis melo])

HSP 1 Score: 150 bits (380), Expect = 2.02e-42
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60
          MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL
Sbjct: 1  MSQSDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSEL 60

Query: 61 GKLRSALAKEGCFQVL 76
          GKLRSALAKEGCFQ +
Sbjct: 61 GKLRSALAKEGCFQAI 76

[Close]

BLAST of IVF0007932 vs. NCBI nr
Match: XP_004152855.1 (codeine O-demethylase [Cucumis sativus] >KAE8651693.1 hypothetical protein Csa_006767 [Cucumis sativus])

HSP 1 Score: 137 bits (345), Expect = 3.45e-37
Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 4  SDSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSELGKL 63
          SDS+KNVLQMSINGDEPPPAY+VEG A+GGAGEIPIIDVGVF+PSSSPEPE LDSELGKL
Sbjct: 6  SDSTKNVLQMSINGDEPPPAYIVEGSAIGGAGEIPIIDVGVFLPSSSPEPEALDSELGKL 65

Query: 64 RSALAKEGCFQVL 76
          RSALAKEGCFQ +
Sbjct: 66 RSALAKEGCFQAI 78

[Close]

BLAST of IVF0007932 vs. NCBI nr
Match: XP_038889718.1 (codeine O-demethylase-like isoform X3 [Benincasa hispida])

HSP 1 Score: 134 bits (336), Expect = 2.27e-36
Identity = 69/81 (85.19%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 5  DSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSELGKLR 64
          DS+KNVLQMSINGDEPP AYVVEG AVGG GEIPIIDVGVF+PSSSPEPEVLDSELGKLR
Sbjct: 7  DSTKNVLQMSINGDEPPRAYVVEGSAVGGVGEIPIIDVGVFLPSSSPEPEVLDSELGKLR 66

Query: 65 SALAKEGCFQVL---ISFPFL 82
          SALAKEGCFQ +   IS  FL
Sbjct: 67 SALAKEGCFQAIGHGISSSFL 87

[Close]

BLAST of IVF0007932 vs. NCBI nr
Match: XP_038889717.1 (codeine O-demethylase-like isoform X2 [Benincasa hispida])

HSP 1 Score: 134 bits (336), Expect = 7.49e-36
Identity = 69/81 (85.19%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 5  DSSKNVLQMSINGDEPPPAYVVEGCAVGGAGEIPIIDVGVFMPSSSPEPEVLDSELGKLR 64
          DS+KNVLQMSINGDEPP AYVVEG AVGG GEIPIIDVGVF+PSSSPEPEVLDSELGKLR
Sbjct: 7  DSTKNVLQMSINGDEPPRAYVVEGSAVGGVGEIPIIDVGVFLPSSSPEPEVLDSELGKLR 66

Query: 65 SALAKEGCFQVL---ISFPFL 82
          SALAKEGCFQ +   IS  FL
Sbjct: 67 SALAKEGCFQAIGHGISSSFL 87

The following BLAST results are available for this feature:

BLAST of IVF0007932 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0007932 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CD57	2.5e-37	100.00	Codeine O-demethylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BNU3	3.7e-33	97.37	codeine O-demethylase-like OS=Cucumis melo OX=3656 GN=LOC103492112 PE=3 SV=1	[more]
A0A0A0LGY4	4.3e-29	87.18	DIOX_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070275 PE=4...	[more]
A0A6J1HQK7	1.1e-27	85.53	codeine O-demethylase-like OS=Cucurbita maxima OX=3661 GN=LOC111465790 PE=3 SV=1	[more]
A0A6J1FB89	3.1e-27	84.21	codeine O-demethylase-like OS=Cucurbita moschata OX=3662 GN=LOC111444057 PE=3 SV...	[more]

BLAST of IVF0007932 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047620.1	3.01e-51	100.00	codeine O-demethylase-like [Cucumis melo var. makuwa] >TYK08276.1 codeine O-deme...	[more]
XP_008450549.1	2.02e-42	97.37	PREDICTED: codeine O-demethylase-like [Cucumis melo]	[more]
XP_004152855.1	3.45e-37	89.04	codeine O-demethylase [Cucumis sativus] >KAE8651693.1 hypothetical protein Csa_0...	[more]
XP_038889718.1	2.27e-36	85.19	codeine O-demethylase-like isoform X3 [Benincasa hispida]	[more]
XP_038889717.1	7.49e-36	85.19	codeine O-demethylase-like isoform X2 [Benincasa hispida]	[more]

BLAST of IVF0007932 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007932.1	IVF0007932.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016491	oxidoreductase activity