IVF0007759 (gene) Melon (IVF77) v1

Overview
NameIVF0007759
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReplication factor C subunit 1
Locationchr05: 1572901 .. 1585615 (-)
RNA-Seq ExpressionIVF0007759
SyntenyIVF0007759
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTGACGAGGCCGCCTCTATGGGTCTGGGAAGATGACGTGGCATAATACTTTTGTACGACACACAACCTTCACCCGCCAGAATCCTCGAGCCATTGCAGTCTCCTTCTAGCTTCCAAGGCACGGAGGCCGCCGGCGATCTTCAAACAACGCGAACCGAAAGGTATATTCGACTTCCTTCAGTCTTTTCACTCTCACTGGAACTTGATTACTTCCGTTAATCACTTTCTCTTCCCTTTGACTCGACTGTCTTTCTGTGAAAAACTGCTACGTCGATTCGAACTTCTCCGCATTTCCGAAACCAAGCGGTGGAAATTTCGCTCTCAGTATATTGTTCTACTTCGGCTGCGAACCGGTTGTTGAAAAACCCTAAATATCGAGTTTACTTATCCCTCATTTATCGAGGACGGATGTTTATTAACTTTCCAATTTCGTTGACGATCATAGCGTACTCGAATAACTCGATTGTGACAATCGGGGTACGGTTTATGTGTAATATATTCCTCATCAAGAATTAACGATTCTGATTTTTGACCAACTTTCTTTCAGAGCATAGTTGAACGGTGAAGTAGACAGTGGAGTGGCGTTTCTTGCCTTTCGCTCTCCCCTTTGTATTTTACAATGGTGAGTTAGGGTTTTCAGTTCGGTTGTTATTTCCGTGGTACTCGCATTCTTTCTTTAATAGTCACAATGAAGGAAGTTTTTAAATATATTTTTCTCATCGACTGGGGTTCCGTTTGAGTTTGGAGTTTTATCGACAATTACATTTGCATAATCTCGCATTTGGTAATCTTTGTTTTTCTTCTTTACTGTTTAAATTATGATGTGGTTAAACAGGGGGATATTAGAAAATGGTTCATGAAAGCACACGACAAAGACAACGGCAGTGGGTCAAAGAAAGCAAAACCTGCTCCAAGCAGCTTAGAGAAATCCATTTCAGCTGAACTACAGTCCGGAAAAACAGTGAGTTTTCTGACCCTACTCTTCTTAGTAGTTGAGAGGTGGCATGTTCAAGTATCATTATATTATTGATGTATTTCTAGTTTCTCTAGCTGCATATTTCGCTGGTTCTTTATTTTACAATAACTCCTTGTTATTTGGATAGATTATGGATGTATGTTTCTGGAACCCTTGGTTCACGTAGGAGGTGGTGTATCTAAGGTTTCTGAAAAAAAATTGAGCTATATTTAAAACCTGGTCTTGAGTTCATTTCTGAGACAAGATGCTATAAAGGCACATTATCTTGATGTCAATCGTATCTAGTTTTTGGCTTGATCCTGCAAGAAAGAGAAAGATAAATAGAAGAACTCTTGATATTCTAGTTTCCAAATAGAAAGGATGCACTTTTTTTTTTTTTTAAAAAAAAAGATAGAAAGAAAGCACTTGGGAATGAGTAAAAGCTTCTAGATATTTTAGAAGAAAAAGGTGGTCATGGTTACTACAGGTGGACTGCCTCTCGTAATCTTGATGTTGAGGTGTTAGAGGTGCAATGAGGGTGGATGAATATTGGAGACAGGAATCTAGAAATAAAATGCCCTATCAAGATGAAAACTTAGTCTTTTCATTTATAGTTGTTGCTGCTAGGAGTCAAAAGTCAATTTAATGGAAATTTAGGATGCTGATGATTGGAGTCCTGTTACTCAGCCGGAGACACCATATCTGAACCTATTTTGTTCTTCAACAACTTATTCTTACAAGAAAGTGGGACAGCAGTGGCTTTCTCATATTTGGGTGGGGTTTGTAACCATGCTGGATTCTAGAAAGAGTGGATAATAAACAACCATTCTTTATGTTTTAGGCATGCTTGGAGATTCTTTTTTATTTAACTTTTATGAAAATAACCACTTTCATTGAGAAAGATGAAAAAATACGTGGGCATATAAAAACCAAGCCCACAAAAAGGATGGACACCCTTTACAAGAAGGGGTTTCAACTATGCAAAATCATTCCTAAAGAATAATTACAAAAAGTCTTCGAAATTGAAGCCTAGAGAAGAGAGAAACATGAACGCGAACAAGGGACTAGAGCTCCCCAGGGTTCCGCTCCACTCCCCTAAACGCCCTTCTATTCCTCTCATCCCACAAGACCCATAACACTGCACACACATTAGCAGGCCGAAGAAACTGGCCTTTCTCCTAAAGGCGGATTTAGGACGGACTCCTCAATCATAGTACTGACATCTCTATGGCGACCACTCATCATACCAAACGTTTGGAAAAAGGAGTCCCAAACAATGCCTGTTCAATCACAGCTCCAAAGAATATGGTCCAGATCTTTCTTTGCCTTCTGACAAAGCATACAGCATAAAGGCCCAAAAAGCAGAGGATCTTCCTGCCAAGCTTGTCCAACATGTTAGCCACCATGAAGAACCTGCCAAGTTAAGAACCTCACCTTCCTAGGGACCTTAATCCTCCAAACCACTGACTCGGTGAAAAAACCAAATCGCCTAGGGAGAGGGATCAACCAACCAATGAAAGAAAGCTTGTAGATGCGAAGATTTGAGGATCGCCTGACTCACCTTATGGTAACAGCTGAAATGGATGCTAGGGAACAGGGTATCTTGTTCAGTAGACAGCTTTTAGATGCCCAGATTTCAGGATCGCTTGACACATTGGTTCTATGAAATGCTATTATTGATTTTTTTTAGGAAATAATTTCATTGATGTTCAAAATTTACAAAAGTAGAGAGGAAGGATTCTCAATCCCTACAAGTTATATAAACTTCTTCAAGTGGAGAATAATGTTCATTCAGTGATTGAACTAATTGTTTTCACTTTTCAAATAGTCATAAGTTCTATTGTTTTTTTATTATTTTTTTCACTTGAACTTTTTTTTTTTCTAGACTGACCATGACAAAAATCTACTTCATTGGAATGGCTTTTGTGTGAATAGGCAGGGTTGCTGCTTGTACTATACATGTTCTTTCTTTGTCCTATAGTCTAAGAGCTCAGAATGCCTTGGAAAAGATATACCATGTGCAACTACTTTTGTGGTCTCTTTTACTTTTTTGTTCTGCAACATCAATACGTTGTGTTTGTTAACAAATGATATTGCAGGGGCCAAGTGGTGGAGAAAGTACTGGCAGACGGATAACTAGCAAGTATTTTGCATCAGAGAAGCAGAAGGCCAAGGATACAGAAGAAACAGAGGTACCCCCGATCATAGGAAAGTCCCCACAGGATACTAAGGAATCACCAGCCAAAAGAAAGTTTCAAAAGTATAATGGGGAATCACCGAAAGCTTCACCTCTAAAAAAATCAAACAAAATTGATGACGACGATGATGATGCTGTTCTTTGTAGTTCTAAAAAGAACATGTCTGAAGTCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACACAGAAACCTGTTGAAATGGAAGCGAGTGATGATGAGGAAACCAAGGGCACCGATTCTTCTCTAAAGCCAAGTGGAAGGGGTAGGGGTGGAAGAGGTTTGTCTGCTGCAACCATTGGTGGTAGAGGCAGAGGTGGTGGTGGGCGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGGGAAAAGGTGAAAATTTATTGAAAATATTTGGACTGACTAGAAAAAGTTGTGGTTGAATGCATTGTGCATTATTATCCTATTCTGTTTATTTTCTTCCCTGCTTGTTTCTCAGGAAGTCCCTGAAGGTGCTCCGGACTGTTTAGCCGGTTTAACTTTTGTAATTAGTGGAACCCTTGACAGGTTATTCCTCTCATTTTCTTATTCATGATTAGTGGACCAGGAATGTTAAAGCATACTGTTGAACAGATTCTTTTTTTTTGTTAAACTGAAATGTGATGTGGAATGCATCATTGCTTTCTAAACTTTTTTGTTACATTTTTTTTTAAAAGGATACAAGAATTTTTTTAGTTACATTACACCTCTTTTTTCTTTTGAAAGGAATTCATGATTTTCCAAGAGGCATGGGTCATGTTATTTGGTCATCTTTAAACTCTTATATACGTTTTCATTAGATAAGAAACATTTCATGAAATAAATGAAATAAGGGGAGGCCCCAAAGCACCTAAAGGTGATTACAATGGATAAACGTTTACATGTCTTTGTATCATATATGAAATATGCTTCATTTCTCGACATCTTTTGTGTTTCATGGTATTGTTGTACATCCTATAAACATTGGTGTAATAATATTTGTCCATTCTACAGTCTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGAGTAACTGGATCTGTCAGCAAAAAAACAGTTAATTCATCATTCTACTATTTCTACTTGTCTATAGAAGAAGTCCTTGCACACTTTTTATGATTTGGTTGGCCATTCAATATTCTTTGGGGAGGCAAATTATAGATCGTTATGTTTGCAGAATTATCTACTATGTGATGAAGATATTGGTGGCCGAAAATCGTCAAAAGCAAAAGAGCTGGGGTATTTTTTATTTTGTTCATTATTGAAATGGAATCCACTTGTCCTGTTTCTTCCTTTATCTTCTTCCAATTTTTCATTTATTTTCCGTGTGTCTCTCTTTCTTGTAGAACTGGTTTTCTCACTGAGGATGGCTTGTTTGACATGATCCGTGCATCTGGCAAAAAAGCTCCTCCTAGGCAAGATCCTAAAAAATCTATGGTTAAATCTGAGGAATCTCCGACGGAGAAAAAATTCCAGAAAGTACAAGCAAAATGTAAGTTGCCAGGAGTTTTGGCTCTTGCTTATTCTATCTGATTGAGACACAGAAGACACTATGTCTGTCATTGTCAAACAATATGATCGTCGTTGTCAAACTCTTGACGCTTAAATGTTGTAGGGTCATGATTCTAGTGCCAAAAATTCTGAGTCTCTGAAAATTTATGTAGTCTCTTTTCATCTACACCTGTACATACCTGAAACATGTTCAACCTTTTTTCAGTGTTTGGGTATTTTGATTAGAAACAAGAAACTGTTAAATAAAAAAAAATGAAATATGAAAAAAACTAAGGACACGTCTTAATTGTATTGCGTATAGTTTTAACAAGTTTGATGAGTATGCTATTATATTGAAAGTGTTCCTTGACTGTGGATGCAGCCCACAAAGATTTGACTGCTGGTGCTTCACCTGCTAAGCAAAAAAGCCGAACAGCTGAGTTCTCTAACCTAACATGGACAGAAAAATATAGGCCCAAGGTTCCAAATGACATTATAGGGAATCAGTCACTGGTATCTCAATCTCTCATGTTCTCCTTTGCTATTGTTACATTACATATTATATTTTCAGGTTTTGTGTGCGCAAATCAAATATTAATGTCATTGCGACTAAGTTTTGTTGCATTTTACAATTGTAGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAAAACTTCCTAGATGTTGGAAGCAAAAAGAAGGTTAAAAAGGCCAGTGATTCTGGTGCGAAAAAAGCTGTCTTGTTATGTGGAGGTCCTGGCATAGGTAAAACTACATCGGCTAAGTTGGTTAGCCAGATGCTTGGTTTTGAGGCTATAGAGGTACTTCATTTGTTTTAAACAAGCATTGATTATTTATTCTTGGGAAGAATTTCAAATGGAACTTTTCTCACGTGTGCATTGTATGTTAGGTAAATGCCAGCGACAATAGGGGTAAATCAGATGCCAAAATTCAAAAGGGAATTGGTGGAAGCAATGCAAATTCTATAAAGGAGCTTATCAGCAATGAATCACTTCATTTCAAAATGGATCAGTTAGTGTGCATAATGCATTTGCTGAACTTATTGCATTAAGTTAATATCGCCGGGTTGTGTTAGGTATTGATTCTATTGAAAGGTAGAACAATAATTAAATTGAATTGCAGGCCAAAACATCACAAAACTGTGTTGATCATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGCGAGCATTAAGATGTCCAAAATTCCAATTATCTGCATCTGTAATGACCGTTACAGCCAGAAACTGAAAAGCCTTGTGAACTATTGTCTTATTCTCAGCTTTAGGAAACCTACAAAACAACAGGTTTAAAGACCTTTTATGGTTGATTATCTATGTTCCCTGCCTCCGTTATGGGTGATATACTGTGTTTGGATTACAGTGAGTCGGGATCAGTACTTTCTCTGTTGTATTTTTCCAAGCTGTTCCAAAACGTTGCAATAATTCATAAGTAGAGGATTGTTCCAATGTCACCTAGAACCTTTGTCATCCAATTGGATTAGGGACCTTTTCTTGGTCATGTTATGTCAGTAGGAAGGAGATGCCTTATCCTCTTGCCTCTGCATGCATCTCTTTTGTTCTCTTTTGAGTGAATTCTATGTTTCTCTTTTTAGTTTTCACCAAAAAGGAAAATAGAAAATTATGTCATAACATGTGTAGTATACTCTCAACTTCTCAAGTATGGGCAGTTGTTAAATTCAGTTTCTTTACAATTTTGTGGAGAGCTTGACTTAAGAGAAACGTTTAGCTTTTTAGAGAGGTGGAGAGATGTGTGATGAGGTTTGAAAGGTGGCGAGCTTTAATGCCTCCTTGCAGGTGTGAGCTACTAGGCCTTTTTGTAACTATGGTTTTAGTTTGATTTTGTTGGATTCCTTTTTGTTGTTTGTCTTCATCTCCCTTTTTTTGTTTATCTTTTTCATTCTTGGGATAATACTATAAAATTTTGATAGATGTTAGTTTTACCTGTTCTAGATGGCAAAAAGATTGATTCAAGTTGCAAATGCAGAAGGCCTTCAAGTTAATGAGGTAAGCACTTCGTATATGACTTTGAGTATGGTTGCTCATTTATTAGAGTGGGTTGTATGCATGCTTGGTTATAGCAGCTTGATTCTTGATATACACTGGTTTCAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCTATGTCAGTTATTAAATATGATGATATTCGGCAACGGCTTCTGAGCAGTAGGAAAGATGAAGACATCTCACCCTTCACTGCTGTTGATAAGTATGCACGAGTTAATCTTAATTCTTAACTTTTCTATCTGGCCAAGCCTTTCTGGCTGCTGTATTTGTCCTGTCAAGTTCATGGAAAACTGTGGTGGAGCAATAATATATAATACTTGCTGTGTTTCCAATTTAAGCTGGTTGGTGTCGTCCCATTTTCTTATTTAGCATTTTTGCATGCTTTTTTTCAATTTTCATATTCTTCTGAGACCTGTTTGACGCCCCTGTAGCAAATTCTTTTTTAATGTCCCTTTACCCATGATTATTTTGGGTTGGAAGGCTGCTTGTATGCTCTCTTCTAACTGCCCTAAGGTTGTTTTGCCTCCATTTTTAGTATATTTATTGGTTTCTTATAAAAAAGAAAGTAATGTTAATAATAATAAAGGTACATTTCTCGTGATATACCAACAATATATATGTATTATTGATTATGAATTGTAGACTAATACTATCCATCCTATTTGCTATATATGTATGCATGTATGTAGTATGTATGCTGTTGTTTATGAATCGTAATTTTTAAATTTATGGTTTCTATTTTTTAATGACTTATAATACTATATAGATAATTTGACATGTTCGAACAATTTTAACAAACTTGGTAATTTGATATGAAATATTTTTGTTTGTTTGAAGGTTTTAAGAATATTCTCCGTAAATGAGGATTCCTGGGGGAATTAATCATTTAACTGAATTATCTTTTTTAAAAAATCCACTTTTTGAGTTTAAAAAAATGGAGAATTATTCTCTGTGGAGAATCTGCTCTTTTGTGATTTTCTCTGTGGGGAGTCATCACCCTGATGGGGAATCAAATGGGAGAGGCAATGGGTACTGGGAAGCCATCTCCAACCCCGCCTTGCCAATGAACATACTTTTTGTAGGTGTATTTGGAATTCCAATTCTGCCCTTTTAGTTGAAAAGTATCTATTAGTTTCTTGGAAGCCTTTGAATGTTTCATCGTTGCAAAGAAACATAGTTGCTTATGAAAATAATTAAAAACGATGAATCCTCTTGGATGTTAGAATTTCAGGTGCTCATGGATTTCAGTTTTTGGCTGCATGTATTTATCGTGGTCTTTGCACTTGTAGGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATTGATCTCAGCATGAGTGATCTTGATCTAGTCCCTCTTCTTATTCAGGTATCTTACTTTGGTTTAATAGATGCTTGATGCTTGTATCAACTGTCTACCTGTACTAAACCAAACTGTTAAATAATACTTTAGGAGGGACATTTTCAAATATAACAAAATGAACCAAAATATTTACAAAATATAGCAAAATTTTAGATCTATCGTTGATAGACACTGTGTGATAGAATCTGAAATTTTGTCATATTTTAGACATATTTTCAATAGTTGTGCCATTTACAATAATTCCCCTACTTTAGATGTAGAATAACTTTATTTTTAGGATAAATTTGTGTACTTTTTAATGTTTGACTGTAGTTGGTATTTCACTTACGGCTAGTTAAAGAAACTTATTTTATGGGGCCTTCTTTTTGGTCTTTACTTCTAGTCCTCCCACGTTTGTTTTATTCCATCTTGTTAATGAATATCCTGTGGCCTTAACTGGAGGAATCTGAGCATTATAATTGGTTGCAGGAAAATTATATTAATTATAGGCCAAGTGGTGTTAGCAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCCCGTGCAGCTGAATCAATTGCAGATGGTGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTTTCTCAAAGTAGTTGTATTGCTTCTTGTATAATCCCGTAAGTTTCATGGTGTCACCTAAGCAGCTAATGCTTTTCTTTACTAAAGCTACCATTCATTATTGATCTTTGTATAATTCTTTCTGTAACAGAGCTTCGTTATTGCATGGGCAAAGAGAAACGCTTGAGCAGGTGATGAAATTCTGTACATGCAAGTTGTAAGGTTTTGAAATCTTGTTTAGTTCTTTTTATTGATTTATGAGTTAAGAAACTTAGTGATTTGATAATGCTTTGGAGGTACGAGGAAATAGCTATTGTCAGTGAACTGGTAGAATTTGAGTGGTAAAATTTTTCTTCTAATTTCTGTTTATAGTATCCGTATGAGTGGACCATCAAACCTGATGTATTTGATATCATTACAATCTTGCACCTGTGAGTAAAAATACTATATTTTGGATAACGTGGGAGAATTTAATATTATACTTTCAAGGAACGTGTGCGGTTTGCCATAGTGGCATTTCAGTAATACTGAGCTTGTGCATCATTCATGCAGTTTGAGCGTAATTTTAATAGATTTGGTGCATGGCTGGGAAAGAATTCCACATTTGGAAAAAATATGAGACTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAATCCTGTTCAGGGAGGTAATTTGTTGTTTGCTGTATTTGTTCTTTCGACTGTGGTAGCATATTATATGTCCTGTATGCATATTTCCCCACCTGGAAGCGTTAGATACCTTCTCAATTAAATATCTTTCAATTATATGTTCTTCTTATAAAGGATGAGAATCATTTCATTGATAATGAAGTCATAGAAAATGAAGGAATGTGTTGGTTAAAGAAGATTGTCTCTAATTACCATCTGGCCATACTTTCAAGAGATGGCAAAGAAGCTGTGGACTAACATGATTAAATTTATCCTTCGAATCTTATAGTCGGTAACAAATTGTGGTGAATGGTAAGGCAAGAGATTTCCAGAAAATGTCTGTCTACCAAAATTTTGTTGTTCAAATTGGGACTATTTACATAATATGTTTTGCAACTATACATGCATGGGTGTTTTGATTTTACTTATCACCTTATCAATGAACATTTTCTCACAATCTCTTTTGTAATTACACCATTCGCACGATCAAACCTAGATCGGACATCTTGTTTCCTCGCCCTTTTGGCTGTTCTCTTGTTTTTGGGTGAAAATTGAAAAGAATTCCTTTGATGTATTTGTCCAAGATAATAATAATAATAGTGAACGTTTTTTCTTAAAAAAATTGAAAAAGAATAAGAAAGCCAACATGCGGTTCTTATCACTCTATTGTGAAAAGAGATCTCTTAAAATTTCATATGGGCCATTGGGGAACTCTTCCAGAGGGATTTATCTTCGGTTAAACTCCTGACATTCAAGCTGAATGAAGAGTGTCTTGTAATTACACTCTTAGGAATTTTCCTTCCATTTTCTTACTAATGGTTTCCTTCTGTTTTTAATTTTAAAAAATTCTGCATTTCCATTAGCTTAATAGTTAACCTAAACTTCTCCATTGATAGACTAGGATATGTAATGGTCAGATAGAAGTTCCTAGATTTTTAATGTTTCCAGATTCTGGTATCATCCTAATGCTCAGGAGAAAAGCTTTCAATTCAGGCAAAGGAGAGAAGCCCACCACTAAATCCCCCTATCACTATAAGTTATAAAATATGGGTTTTCCTTCCTCTTTAAGATTATTCCCAAATATGTCGCTTCTTGCATGGTCTTAAATCTAAGCTGATCTGCGATCATAACTTTGGAAACTTGTTAAAATTGTCTGGAATACACTTGTAAGCTTTTTAACCCCACTCTTTTCACATCCTTGGGCCTTTTTGCTATATGCTCTTTGTATAACTCTCTTGTACTTTGAGCTTTAATCTCATATCATTTTACTAATAAAGAGGCTTGTTTCCATTTTTTTTAAAACCCATTCTTTTCACATGGATATGTGTGCCATTAGTTGCAAGCTATAACACTTGTATACGAAATAATACAGGGAACACCTACGAGTTGAGAACCTTACTCTGTTTCTAAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGTTAGAATATATTTTGCTTGTCTGATTTTAGTATGGGAATGGTAATTCTTCGAGGCACTCACCATGGTGTACTTAATGATTTTTCAAAATGATATGATCACCAGGATGAGGCTGTTAAAACAGTGGTTGAATTTATGAGCCTATACTCAATCAGTCAGGAGGATTTTGATACTGTTCTTGAGTTGTCAAAATTTCAGGTATTGACATCTCATTCTGTTTAGTGATATCATGCCTTCTATTCTGGCCATACTTTTTTTAGTGTAATTTTCTTACGGACGATTCTCCAAAACAGGGTCGTAAGAATCCACTAGATGGAGTTGCCCCCGCAGTCAAAGCTGCTCTAACCAAGGCATACAAAGAAGCAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTCCTGGAATGAAAAAAGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCTACTGAGGATACTGTTGAAGGTGCTGGGGGAGAGACATTGGTGGAAAGTGATGATGAAAACTCTGTGGACAATGAGGGCGAAGGTAAGATTTGGTTCGCTTTTTCTAAACCAACTGTTAGCAAATGAGTTGTGCTTGTTGGGAAAGTCAGTTTGTGAGAGCCCTAATTTGAGATATATTAATATTATTGGTGGGATAATAATAAGAGTCATTAACCATGAGTGTCTTGGTTATAAATATAGTGTGTTGGGGTCCCTAGAGGGTGTGAGCCATTTTGGTAGAAATTTTCACGTGAAAATTTTAGGAGGGAGTCCTCTCGAAAAGCTATTATATCATAATTTCTTTTGCCGATTTTGCGATATAGTTTTATCTTGGTTTTCTTCGTGCTCCTTTAAGTTCTTTTTGTTAGGAGTATCCTTAACAGATACCTTCTTGTTTGCAATTATAGAAAACTCCACAAATGGTGAGAAGCTGCAATTAGAACTTCAAAGCTTGAACAAGAAAGGTAGCTGATCTTTCTCCTTTGCTTCTAATTTGTTTAAAACGTGTAGTCTTTCTTTCAAATGTACTTCATATTTTTTGTATTTTGTTAGGAATGCAAGTGCAATTGGATTTGAAGGGTGTGGAAGATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAGAGGAGGTAGAACTTCCCAGGCTTCAGAGAAGAAAAGTGGTCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGAAATAACACGCTTCAAGACTTCGGGTAATGTTATGTTTACCTTCGTCCTATGCATGCATCAGTTTGCTGGTTAATGTGTTTTGAACTGCTAGAAGAATACATAACCTTGTATATGCCACATGCTACATGGGCCTTTTTGACGTATAACAGAAACATGCTTTTTGTATCAACCATTTTGACTTGGAATAGAAATGAGACCGTGTTTTCGCCATGGAGCGGGTCAACATTTGGAATGTCAATTCACCCGAAGAATGAGATTGGGTTTTAATGAAATTATGCCATTTCTAGGGGCAATTTGGTAGGTAGTTTGAATTTTGTTTTATGATTTCGGATTCATTAGGTCTACAAATTATGTATTTGGTCGGCAATCTAGATGCAATTATGTGATAGCCCCCCGTTGCTCTTTACATATACATTATTGTTGATAGCCTTACCTTCACTAATTATCTTCAAGAAGGTCTTCGGTACTACTCAGCCAGTTTTAAGAGAGAAATTAGTGGAGACTTGTAGATGGAGGGAAGTATCTTCCAAACATTTAAGGCTTACAATCTCTAAGAATCGTTCATG

mRNA sequence

AGTGACGAGGCCGCCTCTATGGGTCTGGGAAGATGACGTGGCATAATACTTTTGTACGACACACAACCTTCACCCGCCAGAATCCTCGAGCCATTGCAGTCTCCTTCTAGCTTCCAAGGCACGGAGGCCGCCGGCGATCTTCAAACAACGCGAACCGAAAGAGCATAGTTGAACGGTGAAGTAGACAGTGGAGTGGCGTTTCTTGCCTTTCGCTCTCCCCTTTGTATTTTACAATGGGGGATATTAGAAAATGGTTCATGAAAGCACACGACAAAGACAACGGCAGTGGGTCAAAGAAAGCAAAACCTGCTCCAAGCAGCTTAGAGAAATCCATTTCAGCTGAACTACAGTCCGGAAAAACAGGGCCAAGTGGTGGAGAAAGTACTGGCAGACGGATAACTAGCAAGTATTTTGCATCAGAGAAGCAGAAGGCCAAGGATACAGAAGAAACAGAGGTACCCCCGATCATAGGAAAGTCCCCACAGGATACTAAGGAATCACCAGCCAAAAGAAAGTTTCAAAAGTATAATGGGGAATCACCGAAAGCTTCACCTCTAAAAAAATCAAACAAAATTGATGACGACGATGATGATGCTGTTCTTTGTAGTTCTAAAAAGAACATGTCTGAAGTCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACACAGAAACCTGTTGAAATGGAAGCGAGTGATGATGAGGAAACCAAGGGCACCGATTCTTCTCTAAAGCCAAGTGGAAGGGGTAGGGGTGGAAGAGGTTTGTCTGCTGCAACCATTGGTGGTAGAGGCAGAGGTGGTGGTGGGCGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGGGAAAAGGAAGTCCCTGAAGGTGCTCCGGACTGTTTAGCCGGTTTAACTTTTGTAATTAGTGGAACCCTTGACAGTCTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGAGTAACTGGATCTGTCAGCAAAAAAACAAATTATCTACTATGTGATGAAGATATTGGTGGCCGAAAATCGTCAAAAGCAAAAGAGCTGGGAACTGGTTTTCTCACTGAGGATGGCTTGTTTGACATGATCCGTGCATCTGGCAAAAAAGCTCCTCCTAGGCAAGATCCTAAAAAATCTATGGTTAAATCTGAGGAATCTCCGACGGAGAAAAAATTCCAGAAAGTACAAGCAAAATCCCACAAAGATTTGACTGCTGGTGCTTCACCTGCTAAGCAAAAAAGCCGAACAGCTGAGTTCTCTAACCTAACATGGACAGAAAAATATAGGCCCAAGGTTCCAAATGACATTATAGGGAATCAGTCACTGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAAAACTTCCTAGATGTTGGAAGCAAAAAGAAGGTTAAAAAGGCCAGTGATTCTGGTGCGAAAAAAGCTGTCTTGTTATGTGGAGGTCCTGGCATAGGTAAAACTACATCGGCTAAGTTGGTTAGCCAGATGCTTGGTTTTGAGGCTATAGAGGTAAATGCCAGCGACAATAGGGGTAAATCAGATGCCAAAATTCAAAAGGGAATTGGTGGAAGCAATGCAAATTCTATAAAGGAGCTTATCAGCAATGAATCACTTCATTTCAAAATGGATCAGCCAAAACATCACAAAACTGTGTTGATCATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGCGAGCATTAAGATGTCCAAAATTCCAATTATCTGCATCTGTAATGACCGTTACAGCCAGAAACTGAAAAGCCTTGTGAACTATTGTCTTATTCTCAGCTTTAGGAAACCTACAAAACAACAGATGGCAAAAAGATTGATTCAAGTTGCAAATGCAGAAGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCTATGTCAGTTATTAAATATGATGATATTCGGCAACGGCTTCTGAGCAGTAGGAAAGATGAAGACATCTCACCCTTCACTGCTGTTGATAAGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATTGATCTCAGCATGAGTGATCTTGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGTGGTGTTAGCAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCCCGTGCAGCTGAATCAATTGCAGATGGTGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTTTCTCAAAGTAGTTGTATTGCTTCTTGTATAATCCCAGCTTCGTTATTGCATGGGCAAAGAGAAACGCTTGAGCAGTTTGAGCGTAATTTTAATAGATTTGGTGCATGGCTGGGAAAGAATTCCACATTTGGAAAAAATATGAGACTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAATCCTGTTCAGGGAGGGAACACCTACGAGTTGAGAACCTTACTCTGTTTCTAAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGATGAGGCTGTTAAAACAGTGGTTGAATTTATGAGCCTATACTCAATCAGTCAGGAGGATTTTGATACTGTTCTTGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCACTAGATGGAGTTGCCCCCGCAGTCAAAGCTGCTCTAACCAAGGCATACAAAGAAGCAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTCCTGGAATGAAAAAAGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCTACTGAGGATACTGTTGAAGGTGCTGGGGGAGAGACATTGGTGGAAAGTGATGATGAAAACTCTGTGGACAATGAGGGCGAAGAAAACTCCACAAATGGTGAGAAGCTGCAATTAGAACTTCAAAGCTTGAACAAGAAAGGAATGCAAGTGCAATTGGATTTGAAGGGTGTGGAAGATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAGAGGAGGTAGAACTTCCCAGGCTTCAGAGAAGAAAAGTGGTCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGAAATAACACGCTTCAAGACTTCGGGTAATGTTATGTTTACCTTCGTCCTATGCATGCATCAGTTTGCTGGTTAATGTGTTTTGAACTGCTAGAAGAATACATAACCTTGTATATGCCACATGCTACATGGGCCTTTTTGACGTATAACAGAAACATGCTTTTTGTATCAACCATTTTGACTTGGAATAGAAATGAGACCGTGTTTTCGCCATGGAGCGGGTCAACATTTGGAATGTCAATTCACCCGAAGAATGAGATTGGGTTTTAATGAAATTATGCCATTTCTAGGGGCAATTTGGTAGGTAGTTTGAATTTTGTTTTATGATTTCGGATTCATTAGGTCTACAAATTATGTATTTGGTCGGCAATCTAGATGCAATTATGTGATAGCCCCCCGTTGCTCTTTACATATACATTATTGTTGATAGCCTTACCTTCACTAATTATCTTCAAGAAGGTCTTCGGTACTACTCAGCCAGTTTTAAGAGAGAAATTAGTGGAGACTTGTAGATGGAGGGAAGTATCTTCCAAACATTTAAGGCTTACAATCTCTAAGAATCGTTCATG

Coding sequence (CDS)

ATGGGGGATATTAGAAAATGGTTCATGAAAGCACACGACAAAGACAACGGCAGTGGGTCAAAGAAAGCAAAACCTGCTCCAAGCAGCTTAGAGAAATCCATTTCAGCTGAACTACAGTCCGGAAAAACAGGGCCAAGTGGTGGAGAAAGTACTGGCAGACGGATAACTAGCAAGTATTTTGCATCAGAGAAGCAGAAGGCCAAGGATACAGAAGAAACAGAGGTACCCCCGATCATAGGAAAGTCCCCACAGGATACTAAGGAATCACCAGCCAAAAGAAAGTTTCAAAAGTATAATGGGGAATCACCGAAAGCTTCACCTCTAAAAAAATCAAACAAAATTGATGACGACGATGATGATGCTGTTCTTTGTAGTTCTAAAAAGAACATGTCTGAAGTCACTCCCAACAAAAAGTTGAAGAGTGGTTCTGGAAAGGGAATTACACAGAAACCTGTTGAAATGGAAGCGAGTGATGATGAGGAAACCAAGGGCACCGATTCTTCTCTAAAGCCAAGTGGAAGGGGTAGGGGTGGAAGAGGTTTGTCTGCTGCAACCATTGGTGGTAGAGGCAGAGGTGGTGGTGGGCGGGGTGGATTTATGAATTTTGGGGAAAGGAAAGATCCTCCACACAAAGGGGAAAAGGAAGTCCCTGAAGGTGCTCCGGACTGTTTAGCCGGTTTAACTTTTGTAATTAGTGGAACCCTTGACAGTCTGGAACGAGAAGAAGCAGAAGATTTGATTAAACGCCATGGTGGCCGAGTAACTGGATCTGTCAGCAAAAAAACAAATTATCTACTATGTGATGAAGATATTGGTGGCCGAAAATCGTCAAAAGCAAAAGAGCTGGGAACTGGTTTTCTCACTGAGGATGGCTTGTTTGACATGATCCGTGCATCTGGCAAAAAAGCTCCTCCTAGGCAAGATCCTAAAAAATCTATGGTTAAATCTGAGGAATCTCCGACGGAGAAAAAATTCCAGAAAGTACAAGCAAAATCCCACAAAGATTTGACTGCTGGTGCTTCACCTGCTAAGCAAAAAAGCCGAACAGCTGAGTTCTCTAACCTAACATGGACAGAAAAATATAGGCCCAAGGTTCCAAATGACATTATAGGGAATCAGTCACTGGTCAAACAACTTCATGATTGGTTGGCACATTGGAACGAAAACTTCCTAGATGTTGGAAGCAAAAAGAAGGTTAAAAAGGCCAGTGATTCTGGTGCGAAAAAAGCTGTCTTGTTATGTGGAGGTCCTGGCATAGGTAAAACTACATCGGCTAAGTTGGTTAGCCAGATGCTTGGTTTTGAGGCTATAGAGGTAAATGCCAGCGACAATAGGGGTAAATCAGATGCCAAAATTCAAAAGGGAATTGGTGGAAGCAATGCAAATTCTATAAAGGAGCTTATCAGCAATGAATCACTTCATTTCAAAATGGATCAGCCAAAACATCACAAAACTGTGTTGATCATGGATGAGGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTTGCTGATCTGATTGCGAGCATTAAGATGTCCAAAATTCCAATTATCTGCATCTGTAATGACCGTTACAGCCAGAAACTGAAAAGCCTTGTGAACTATTGTCTTATTCTCAGCTTTAGGAAACCTACAAAACAACAGATGGCAAAAAGATTGATTCAAGTTGCAAATGCAGAAGGCCTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTAAATGGGGATATGCGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCTATGTCAGTTATTAAATATGATGATATTCGGCAACGGCTTCTGAGCAGTAGGAAAGATGAAGACATCTCACCCTTCACTGCTGTTGATAAGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATTGATCTCAGCATGAGTGATCTTGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGGCCAAGTGGTGTTAGCAAGGATGACAATGGGATCAAACGGATGGATTTGATTGCCCGTGCAGCTGAATCAATTGCAGATGGTGATATAATCAATGTACAGATTCGAAGGCATCGACAGTGGCAACTTTCTCAAAGTAGTTGTATTGCTTCTTGTATAATCCCAGCTTCGTTATTGCATGGGCAAAGAGAAACGCTTGAGCAGTTTGAGCGTAATTTTAATAGATTTGGTGCATGGCTGGGAAAGAATTCCACATTTGGAAAAAATATGAGACTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAATCCTGTTCAGGGAGGGAACACCTACGAGTTGAGAACCTTACTCTGTTTCTAAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGATGAGGCTGTTAAAACAGTGGTTGAATTTATGAGCCTATACTCAATCAGTCAGGAGGATTTTGATACTGTTCTTGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCACTAGATGGAGTTGCCCCCGCAGTCAAAGCTGCTCTAACCAAGGCATACAAAGAAGCAAGCAAGACACACATGGTGCGGGCTGCAGATCTTATTACACTTCCTGGAATGAAAAAAGCCCCCAAGAAGCGAATTGCAGCAATTCTAGAACCTACTGAGGATACTGTTGAAGGTGCTGGGGGAGAGACATTGGTGGAAAGTGATGATGAAAACTCTGTGGACAATGAGGGCGAAGAAAACTCCACAAATGGTGAGAAGCTGCAATTAGAACTTCAAAGCTTGAACAAGAAAGGAATGCAAGTGCAATTGGATTTGAAGGGTGTGGAAGATTCAAGCGCCAAGAAATCCGGTGGCAGAGGAAGAGGAGGTAGAACTTCCCAGGCTTCAGAGAAGAAAAGTGGTCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGA

Protein sequence

MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR
Homology
[Close]
BLAST of IVF0007759 vs. ExPASy Swiss-Prot
Match: Q9C587 (Replication factor C subunit 1 OS=Arabidopsis thaliana OX=3702 GN=RFC1 PE=2 SV=1)

HSP 1 Score: 1169.1 bits (3023), Expect = 0.0e+00
Identity = 646/985 (65.58%), Postives = 758/985 (76.95%), Query Frame = 0 

Query: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60
           M DIRKWFMKAH+K NGS  K        ++ +        +      E+  RR TSKYF
Sbjct: 1   MSDIRKWFMKAHEKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYF 60

Query: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120
             +K K KD +E E               PAKRK +  + +  K  P K +  +DDDDDD
Sbjct: 61  GKDKTKVKDEKEVEA-------------IPAKRKLKTESDDLVKPRPRKVTKVVDDDDDD 120

Query: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180
             +  S+K   + TP+KKLKSGSG+GI  K V+ +  DD E K  ++ LK +GRGRGGR 
Sbjct: 121 FDVPISRKT-RDTTPSKKLKSGSGRGIASKTVDNDDDDDGEDK--ETPLKSAGRGRGGRA 180

Query: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
              A+ GGRGR GGGRGGFMNFGERKDPPHKGEKEVPEG PDCLAGLTFVISGTLDSLER
Sbjct: 181 APGASTGGRGR-GGGRGGFMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300
           EEAEDLIKRHGGR+TGSVSKKT YLLCDEDIGGRKS KAKELGT FLTEDGLFD+IR+S 
Sbjct: 241 EEAEDLIKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDIIRSS- 300

Query: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAG----------ASPAKQKSRTA 360
                 +  KKS+ +     TEK     +    K+ T G            PAK K++  
Sbjct: 301 ------KPVKKSLPERSNKGTEKICAPPKTSPQKEETRGKPLAKSSPKKVPPAKGKNKII 360

Query: 361 EFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKA 420
           E ++L WTEKYRPKVPN+I+GNQSLV QLH+WL+HW++ F   GSK K KK +D+G+KKA
Sbjct: 361 E-TSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKA 420

Query: 421 VLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISN 480
           VLL G PGIGKTTSAKLVSQMLGF+A+EVNASD+RGK+++ I KGIGGSNANS+KEL++N
Sbjct: 421 VLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNN 480

Query: 481 ESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLK 540
           E++    D+ KH KTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLK
Sbjct: 481 EAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLK 540

Query: 541 SLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYL 600
           SLVNYCL L++RKPTKQQMAKRL+ +A AEGL++NEIALEELAERVNGD+R+A+NQLQY+
Sbjct: 541 SLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYM 600

Query: 601 SLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPL 660
           SLSMSVIKYDDIRQRLLSS KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD DLVPL
Sbjct: 601 SLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPL 660

Query: 661 LIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIAS 720
           LIQENY+NYRPSG  KD+   KRMDL+ARAAESIADGDIINVQIRR+RQWQLSQS C+AS
Sbjct: 661 LIQENYLNYRPSG--KDE--AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVAS 720

Query: 721 CIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRE 780
            I+PASLLHG RE LEQ ERNFNRFG WLGKNST GKN RL+EDLHVH+LASRES +GRE
Sbjct: 721 SILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRE 780

Query: 781 HLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPL 840
            LRV+ L L L RLT PL TLPKDEAV  VV+FM+ YSISQEDFDT+LEL KF+GR+NP+
Sbjct: 781 TLRVDYLPLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPM 840

Query: 841 DGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGE 900
           +GV P VKAALTK Y E +KT MVR AD++ LPG+KKAPKKRIAA+LEPT D++    GE
Sbjct: 841 EGVPPPVKAALTKKYNEMNKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGE 900

Query: 901 TLVESDDENSVD-NEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGR 960
            L ++++ N  D  E  E +T+GEKL+  L++LN +G+QV+LDLKG   S ++K+ G+GR
Sbjct: 901 PLADNEEGNGSDAEEDSEEATDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGR 956

Query: 961 G-GRTSQASEKKSGRGSGSATKRKR 974
           G G+ +  S +K   G GS  KRKR
Sbjct: 961 GRGKAADTSAEKKATGRGSGAKRKR 956

[Close]
BLAST of IVF0007759 vs. ExPASy Swiss-Prot
Match: Q2R2B4 (Replication factor C subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC1 PE=2 SV=2)

HSP 1 Score: 1042.7 bits (2695), Expect = 2.6e-303
Identity = 610/1040 (58.65%), Postives = 729/1040 (70.10%), Query Frame = 0 

Query: 3    DIRKWFMKAHDKDNGSGSKKAKPAPSS--LEKSISAELQSGKTGPS----GGESTGRRIT 62
            DIRKWFMKA DK+ G+    AKPA ++   +K + +  +     PS      + + RR T
Sbjct: 4    DIRKWFMKAQDKNGGA----AKPAGTTALAKKPVLSIPEKPSAAPSMAACDQDCSARRKT 63

Query: 63   SKYFASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGE---SPKASPLKKSNK 122
            SKYFAS+ +K +DT           + + T     KRK QK + E     K  P K+ +K
Sbjct: 64   SKYFASKTEKEEDT----------SAGKGTGRGLPKRKLQKVSDELEDDMKPLPAKEVHK 123

Query: 123  --IDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKP 182
               DDDDDD V  S +K   +  P+KKLK   G    +   +    DD E K  + +  P
Sbjct: 124  EEEDDDDDDFVAPSKRKTPVKPPPSKKLK---GASTAEAHGKTGLDDDNEDKMDEDAKTP 183

Query: 183  S-----------GRGRGGRGLSAA---------------------------------TIG 242
            S           GRGRGGRG  AA                                   G
Sbjct: 184  SKASGSGRGRGRGRGRGGRGAGAAHGKTIGLDDDGEEDKMDEDAKTPSKAAGRGRGGASG 243

Query: 243  GRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLI 302
            GRGRGGGGR GFMNFGERKDPPHKGEKEVPEGAPDCL GLTFVISGTLDSLEREEA DLI
Sbjct: 244  GRGRGGGGR-GFMNFGERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEATDLI 303

Query: 303  KRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRAS--GKKAPP 362
            KR+GGRVTGS+SKKTNYLL DED+GG KS+KAKELG  FLTEDGLFDMIR S   K    
Sbjct: 304  KRYGGRVTGSISKKTNYLLADEDVGGVKSNKAKELGVPFLTEDGLFDMIRKSKPAKATVA 363

Query: 363  RQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAG-----------ASPAKQKSRTAEFSN 422
            +    K+  K ++SP +    KV+ +    +T G           AS   QK    +  +
Sbjct: 364  KHQSDKNSEKQQKSPMKSSPVKVERRDGNQITTGKNISPKSNKGSASIDNQKVNIVDRGS 423

Query: 423  LTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLC 482
            L WTEKYRPKVPNDI+GNQS+VKQLHDWL  W + FL  G K K KK +DSGAKKAVLL 
Sbjct: 424  LQWTEKYRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLLS 483

Query: 483  GGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLH 542
            G PGIGKTT+AK+VSQMLG +AIEVNASD+RGK+D+KI+KG+GGS +NSIKELISN +L+
Sbjct: 484  GPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLN 543

Query: 543  FKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVN 602
            +  ++ K  K VL+MDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVN
Sbjct: 544  YSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVN 603

Query: 603  YCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSM 662
            YCL+L+FRKPTKQQM KRL+++A  EGLQ  E A+EELAERV+GD+RMALN LQY+SLS 
Sbjct: 604  YCLLLNFRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQ 663

Query: 663  SVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQE 722
            SV+KYDDIRQRL SS KDEDISPFTAVDKLFGFN G+LRMDERIDLSMSD DLVPL+IQE
Sbjct: 664  SVVKYDDIRQRLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQE 723

Query: 723  NYINYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIP 782
            NYINYRP  V KDD+G+KRM+ +ARAAESIAD DI+NVQIRR+RQWQLSQ++C++S I+P
Sbjct: 724  NYINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSIVP 783

Query: 783  ASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRV 842
            A+L+HG RE LE  ERNFNRFG WLGK ST  KN+RLLED H HILAS+++   RE LR+
Sbjct: 784  AALMHGNREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESLRL 843

Query: 843  ENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVA 902
            + LTL L++LT+PL T+PKDEAV+ VVEFM  YS+SQEDFDT++ELSKF+G  NP+DG+ 
Sbjct: 844  DYLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQ 903

Query: 903  PAVKAALTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVE 962
            PAVK+ALTKAYK+ S + +VRAADL+ +PGMKK  KKR+AAILEP  +++    G    E
Sbjct: 904  PAVKSALTKAYKQGSSSRVVRAADLVNIPGMKKPLKKRVAAILEPVGESLPEENGVASSE 963

Query: 963  SDDENSVDNEGEENSTNGE-KLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRT 974
             D+E+S D E  +    G+ K +L+LQS  KKG+QVQLDLK   +    K    GR    
Sbjct: 964  GDEEDSSDAENNDELVPGDTKPKLDLQSDKKKGIQVQLDLKSNGNGLNSKKMPAGR---- 1021

[Close]
BLAST of IVF0007759 vs. ExPASy Swiss-Prot
Match: P35601 (Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2)

HSP 1 Score: 363.2 bits (931), Expect = 9.0e-99
Identity = 288/924 (31.17%), Postives = 449/924 (48.59%), Query Frame = 0 

Query: 37   ELQSGKTGPSGGESTGRRITSKYFASEKQKAKDTEE-------TEVPPIIGK--SPQDTK 96
            +++  +     GE +   +      +EKQK+ +  E       T  P   GK  + +D K
Sbjct: 236  KIKKARKDSEEGEESFSSVQDDLSKAEKQKSPNKAELFSTARKTYSPAKHGKGRASEDAK 295

Query: 97   ESPAKRKFQKYNGESPKASPLKKSNKIDDDD--DDAVLCSSKKNMSEVTPNKKLKSGSGK 156
            + P K   +K    SPKAS      K  ++   ++  L ++++  S   P        G+
Sbjct: 296  Q-PCKSAHRKEACSSPKASAKLALMKAKEESSYNETELLAARRKESATEP-------KGE 355

Query: 157  GITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGER 216
              T K  ++  +  E     DS  K +                          + ++  R
Sbjct: 356  KTTPKKTKVSPTKRESVSPEDSEKKRT----------------------NYQAYRSYLNR 415

Query: 217  KDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYL 276
            + P   G KE+P+GA +CL GLTFVI+G L+S+ER+EA+ LI+R+GG+VTG+VSKKTNYL
Sbjct: 416  EGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYL 475

Query: 277  LCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKF 336
            +   D G  KS KA  LGT  L EDGL D+IR    K    +   ++ +K E+S  E+  
Sbjct: 476  VMGRDSGQSKSDKAAALGTKILDEDGLLDLIRTMPGKRSKYEMAAEAEMKKEKSKLERTP 535

Query: 337  QKVQAKSHKDLTAGASPAKQKSRTAE---------------------------------- 396
            QK      K      SPAK++S + +                                  
Sbjct: 536  QKNDQGKRK-----ISPAKKESESKKCKLTLLKNSPMKAVKKEASTCPRGLDVKETHGNR 595

Query: 397  FSN----LTWTEKYRPKVPNDII---GNQSLVKQLHDWLAHWN----ENFLDVGSKKKVK 456
             SN    L W +KY+P    +II   G+QS   +L  WL +W+    E         K+ 
Sbjct: 596  SSNKEECLLWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWHKSSPEEKKHAAKFGKLA 655

Query: 457  KASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSN 516
               D  + KA LL G PG+GKTT+A LV Q LG+  +E+NASD R K+  K        N
Sbjct: 656  SKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVA-ESLN 715

Query: 517  ANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAG-DRGGVADLIASIKMSKIPIIC 576
              SIK   ++ +           +  LIMDEVDGM+   DRGG+ +LI  IK +KIPIIC
Sbjct: 716  NTSIKGFYTSGAA-----PSVSARHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIIC 775

Query: 577  ICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGD 636
            +CNDR   K++SLV+YC  L F++P  +Q+   ++ +A  EGL++   A+ E+    N D
Sbjct: 776  MCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQD 835

Query: 637  MRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLF--GFNSGKLRMDER 696
            +R  L+ L         + YD  +     ++KD  + PF    K+F  G  +  + + ++
Sbjct: 836  VRQVLHNLSMWCAQSKALTYDQAKADSQRAKKDIRLGPFDVTRKVFAAGEETAHMSLMDK 895

Query: 697  IDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRH 756
             DL   D  + PL +QENY++ +P     D    K + L++RAA+SI DGD+++ QIR  
Sbjct: 896  SDLFFHDYSIAPLFVQENYLHVKPVAAGGDMK--KHLMLLSRAADSICDGDLVDNQIRSK 955

Query: 757  RQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHV 816
            + W L  +  I + ++P  L+ G       +   F  F +WLGK+S+ GK+ R+++DL +
Sbjct: 956  QNWSLLPTQAIYASVLPGELMRG-------YMTQFPSFPSWLGKHSSTGKHDRIVQDLSL 1015

Query: 817  HILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTV 876
            H+  S  + S +  + ++ L+     L  PL T    E  + V++ M  Y + +EDF+ +
Sbjct: 1016 HM--SLRTYSSKRTVNMDYLSHIRDALVRPL-TSQGVEGAQHVIKLMDTYYLMKEDFENI 1075

Query: 877  LELSKFQGRKNPLDGVAPAVKAALTKAY-KEASKT----HMVRAADLITLPGMKKAPKKR 897
            +E+S + G+ +    + P VKAA T+AY KEA  T     +V+ + L T P +     + 
Sbjct: 1076 MEVSSWGGKPSAFSKLDPKVKAAFTRAYNKEAHLTPYSLQVVKTSRLSTGPALDSEYSE- 1100

[Close]
BLAST of IVF0007759 vs. ExPASy Swiss-Prot
Match: P35251 (Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4)

HSP 1 Score: 347.8 bits (891), Expect = 3.9e-94
Identity = 299/952 (31.41%), Postives = 461/952 (48.42%), Query Frame = 0 

Query: 64   KQKAKDTE--ETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDDA 123
            K+  KDTE  ET        S  +  + P K K  + + E    SP K+S      +   
Sbjct: 239  KKARKDTEAGETFSSVQANLSKAEKHKYPHKVKTAQVSDERKSYSPRKQSKYESSKESQQ 298

Query: 124  VLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDE--ETKGTDSSLKPSGRGRGGR 183
               SS   + EV+     K+ S   I ++  E    + E   +K  ++++K  G  +  +
Sbjct: 299  HSKSSADKIGEVS---SPKASSKLAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPK 358

Query: 184  GLSAATIGGRG-------RGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVIS 243
               ++             +       + ++  R+ P   G KE+P+GA +CL GL FVI+
Sbjct: 359  KTKSSPAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVIT 418

Query: 244  GTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGL 303
            G L+S+ER+EA+ LI+R+GG+VTG+VSKKTNYL+   D G  KS KA  LGT  + EDGL
Sbjct: 419  GVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGL 478

Query: 304  FDMIRA-SGKKA------------------PPRQD--------PKKSMVKSEES-PTEKK 363
             ++IR   GKK+                   P+++        P K   +S++S PT K+
Sbjct: 479  LNLIRTMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSRPTSKR 538

Query: 364  FQKVQA-KSHKDL--------------TAGASPAK---QKSRTAEFSNLTWTEKYRPKVP 423
                +  K   D+              T+G S A+     S   +  NL W +KY+P   
Sbjct: 539  DSLAKTIKKETDVFWKSLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSL 598

Query: 424  NDII---GNQSLVKQLHDWLAHW----NENFLDVGSKKKVKKASDSGAKKAVLLCGGPGI 483
              II   G+QS   +L  WL +W    +E+        K     D  + KA LL G PG+
Sbjct: 599  KTIIGQQGDQSCANKLLRWLRNWQKSSSEDKKHAAKFGKFSGKDDGSSFKAALLSGPPGV 658

Query: 484  GKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQ 543
            GKTT+A LV Q LG+  +E+NASD R KS  K        N  SIK   SN +       
Sbjct: 659  GKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVA-ESLNNTSIKGFYSNGAA-----S 718

Query: 544  PKHHKTVLIMDEVDGMSAG-DRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLI 603
                K  LIMDEVDGM+   DRGG+ +LI  IK +KIPIIC+CNDR   K++SLV+YC  
Sbjct: 719  SVSTKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFD 778

Query: 604  LSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIK 663
            L F++P  +Q+   ++ +A  EGL++   A+ E+    N D+R  L+ L         + 
Sbjct: 779  LRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALT 838

Query: 664  YDDIRQRLLSSRKDEDISPFTAVDKLF--GFNSGKLRMDERIDLSMSDLDLVPLLIQENY 723
            YD  +     ++KD  + PF    K+F  G  +  + + ++ DL   D  + PL +QENY
Sbjct: 839  YDQAKADSHRAKKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENY 898

Query: 724  INYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPAS 783
            I+ +P     D    K + L++RAA+SI DGD+++ QIR  + W L  +  I + ++P  
Sbjct: 899  IHVKPVAAGGDMK--KHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGE 958

Query: 784  LLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVEN 843
            L+ G       +   F  F +WLGK+S+ GK+ R+++DL +H+  S  + S +  + ++ 
Sbjct: 959  LMRG-------YMTQFPTFPSWLGKHSSTGKHDRIVQDLALHM--SLRTYSSKRTVNMDY 1018

Query: 844  LTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPA 903
            L+L    L +PL T    + V+ VV  M  Y + +EDF+ ++E+S + G+ +P   + P 
Sbjct: 1019 LSLLRDALVQPL-TSQGVDGVQDVVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPK 1078

Query: 904  VKAALTKAY-KEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVES 948
            VKAA T+AY KEA  T     A               I A    T  +++    E L   
Sbjct: 1079 VKAAFTRAYNKEAHLTPYSLQA---------------IKASRHSTSPSLDSEYNEEL--- 1138

[Close]
BLAST of IVF0007759 vs. ExPASy Swiss-Prot
Match: P35600 (Replication factor C subunit 1 OS=Drosophila melanogaster OX=7227 GN=Gnf1 PE=1 SV=2)

HSP 1 Score: 324.7 bits (831), Expect = 3.6e-87
Identity = 314/1040 (30.19%), Postives = 484/1040 (46.54%), Query Frame = 0 

Query: 10  KAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYFASEKQKAKD 69
           K+ + +NG    K   AP   +  I +  +     P     T +R  SK  +SE      
Sbjct: 17  KSAEAENGETPSK---APKRRKAVIISSDEDEVVSP---PETKKRKASKTASSEDDVVAA 76

Query: 70  TEETEVPPIIGKSPQDTKESPAKRK-----FQKYNGESPKASPLKKSNKI------DDDD 129
           T E    PI  K+    K + +K K      + + GE+ +    K   K       +D D
Sbjct: 77  TPE----PIAKKARNGQKPALSKLKRHVDPTELFGGETKRVIVPKPKTKAVLEFENEDID 136

Query: 130 DDAVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPS--GRGR 189
              +     +++ E  P KK+ S +    + K  +  + +  + K T S        + +
Sbjct: 137 RSLMEVDLDESIKEAAPEKKVHSITRSSPSPKRAKNSSPEPPKPKSTKSKATTPRVKKEK 196

Query: 190 GGRGLSAATIGGRGRGGGGRGG---FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISG 249
               L ++ +    R    R     +  +  R    + G KE+P+G+PDCL+GLTFV++G
Sbjct: 197 PAADLESSVLTDEERHERKRASAVLYQKYKNRSSCLNPGSKEIPKGSPDCLSGLTFVVTG 256

Query: 250 TLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLF 309
            L+S+EREEAE +IK +GG+V   V KK  YL+  E+ G +K + A+EL    L+EDGLF
Sbjct: 257 VLESMEREEAESVIKEYGGKVMTVVGKKLKYLVVGEEAGPKKLAVAEELNIPILSEDGLF 316

Query: 310 DMIRASG---------KKAPPRQ------------DPKKSMVKSEESPTEKKF-QKVQAK 369
           D+IR            KK+P ++              ++S  K E+  T+ K+ +K    
Sbjct: 317 DLIREKSGIAKQVKEEKKSPKKEHSSEEKGKKEVKTSRRSSDKKEKEATKLKYGEKHDIA 376

Query: 370 SHK---------------------DLTAGASPAKQKS-----RTAEFSNL-----TWTEK 429
            HK                      L     P+ QK      RTA+   L      W +K
Sbjct: 377 KHKVKEEHTSPKETKDKLNDVPAVTLKVKKEPSSQKEHPPSPRTADLKTLDVVGMAWVDK 436

Query: 430 YRPKVPNDIIGN---QSLVKQLHDWLAHWNENFLDVGSKKKVK-----KASDSGAKKAVL 489
           ++P    +I+G     S V +L +WL+ W  N    G+KK  +     K  D    KA L
Sbjct: 437 HKPTSIKEIVGQAGAASNVTKLMNWLSKWYVN--HDGNKKPQRPNPWAKNDDGSFYKAAL 496

Query: 490 LCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNES 549
           L G PGIGKTT+A LV + LGF+A+E NASD R K   K          + +  L+SN+S
Sbjct: 497 LSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLK----------DEVSTLLSNKS 556

Query: 550 L--HFK-MDQPKHHKTVLIMDEVDGMSAG-DRGGVADLIASIKMSKIPIICICNDRYSQK 609
           L  +F    Q    K VLIMDEVDGM+   DRGG+ +LIA IK S IPIIC+CNDR   K
Sbjct: 557 LSGYFTGQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALIKDSSIPIICMCNDRNHPK 616

Query: 610 LKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQ 669
           ++SLVNYC  L F++P  +Q+  +++ +   E ++++   +EE+    N D+R ++N + 
Sbjct: 617 IRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKISPAKVEEIIAATNNDIRQSINHIA 676

Query: 670 YLSLSMSVIKYDDIRQR--LLSSRKDEDISPFTAVDKLFGFNSGK-LRMDERIDLSMSDL 729
            LS        +D  Q+     + KD  + P+  V K+F  +  K +   ++ DL   D 
Sbjct: 677 LLSAK------EDASQKSGQQVATKDLKLGPWEVVRKVFTADEHKHMSFADKSDLFFHDY 736

Query: 730 DLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQS 789
            L PL +Q+NY+   P G  KD      +  +A  A++++ GD++  +IR +  W L  +
Sbjct: 737 SLAPLFVQQNYLQVLPQGNKKD-----VLAKVAATADALSLGDLVEKRIRANSAWSLLPT 796

Query: 790 SCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRES 849
               S ++P   + G       F    N F  WLGKNS  GK  RL ++LH H   +R  
Sbjct: 797 QAFFSSVLPGEHMCG------HFTGQIN-FPGWLGKNSKSGKRARLAQELHDH---TRVC 856

Query: 850 CSG-REHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQ 909
            SG R  +R++     L  +  PL      E V   ++ M  Y + +ED D+++EL+ + 
Sbjct: 857 TSGSRLSVRLDYAPFLLDNIVRPL-AKDGQEGVPAALDVMKDYHLLREDLDSLVELTSWP 916

Query: 910 GRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAA---ILEPTE 962
           G+K+PLD V   VKAALT++Y +      V A       G+KK   +   A    L+   
Sbjct: 917 GKKSPLDAVDGRVKAALTRSYNKE-----VMAYSYSAQAGIKKKKSEAAGADDDYLDEGP 976

[Close]
BLAST of IVF0007759 vs. ExPASy TrEMBL
Match: A0A1S3BLT1 (Replication factor C subunit 1 OS=Cucumis melo OX=3656 GN=LOC103491443 PE=3 SV=1)

HSP 1 Score: 1852.8 bits (4798), Expect = 0.0e+00
Identity = 973/973 (100.00%), Postives = 973/973 (100.00%), Query Frame = 0 

Query: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60
           MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF
Sbjct: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60

Query: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120
           ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD
Sbjct: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120

Query: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180
           AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG
Sbjct: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180

Query: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
           LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
Sbjct: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300
           EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG
Sbjct: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300

Query: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK 360
           KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK
Sbjct: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK 360

Query: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420
           YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG
Sbjct: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420

Query: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP 480
           KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP
Sbjct: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP 480

Query: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540
           KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS
Sbjct: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540

Query: 541 FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600
           FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD
Sbjct: 541 FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600

Query: 601 DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660
           DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR
Sbjct: 601 DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660

Query: 661 PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG 720
           PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG
Sbjct: 661 PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG 720

Query: 721 QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780
           QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF
Sbjct: 721 QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780

Query: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840
           LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA
Sbjct: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840

Query: 841 LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900
           LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS
Sbjct: 841 LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900

Query: 901 VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK 960
           VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK
Sbjct: 901 VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK 960

Query: 961 SGRGSGSATKRKR 974
           SGRGSGSATKRKR
Sbjct: 961 SGRGSGSATKRKR 973

[Close]
BLAST of IVF0007759 vs. ExPASy TrEMBL
Match: A0A0A0KEG6 (Replication factor C subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_6G426950 PE=3 SV=1)

HSP 1 Score: 1777.7 bits (4603), Expect = 0.0e+00
Identity = 937/973 (96.30%), Postives = 953/973 (97.94%), Query Frame = 0 

Query: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60
           MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKS SA    GKTGPSGGES GR+ITSKYF
Sbjct: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASA----GKTGPSGGESAGRQITSKYF 60

Query: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120
           ASEKQ+AKD EETEV PII KSP+DTKESPAKRKFQKYN ESPKASPLKKSNK+DD+DDD
Sbjct: 61  ASEKQEAKDAEETEVLPIIRKSPRDTKESPAKRKFQKYNEESPKASPLKKSNKVDDNDDD 120

Query: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180
           AVL SSKKNMSEVTPNKKLKSGSGKGITQKPVE+EASDDEETKGTDSSLKPSGRGRGG+G
Sbjct: 121 AVLSSSKKNMSEVTPNKKLKSGSGKGITQKPVEIEASDDEETKGTDSSLKPSGRGRGGKG 180

Query: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
            SAATIGGRGR GGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
Sbjct: 181 SSAATIGGRGR-GGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300
           EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG
Sbjct: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300

Query: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK 360
           KKAPPRQDPKKS+VKSEESPT+K FQKVQAKSHKDL AGASPAKQKS TAEFSNLTWTEK
Sbjct: 301 KKAPPRQDPKKSVVKSEESPTKKNFQKVQAKSHKDLAAGASPAKQKSGTAEFSNLTWTEK 360

Query: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420
           YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG
Sbjct: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420

Query: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP 480
           KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKM+QP
Sbjct: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMNQP 480

Query: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540
           KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS
Sbjct: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540

Query: 541 FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600
           FRKPTKQQMAKRL+QVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD
Sbjct: 541 FRKPTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600

Query: 601 DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660
           DIRQRLLSS+KDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR
Sbjct: 601 DIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660

Query: 661 PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG 720
           PS VSKDD GIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSC+ASCIIPASLLHG
Sbjct: 661 PSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHG 720

Query: 721 QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780
           QRETLEQ+ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF
Sbjct: 721 QRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780

Query: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840
           LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA
Sbjct: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840

Query: 841 LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900
           LTKAYKEASKTHMVRAADLI LPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS
Sbjct: 841 LTKAYKEASKTHMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900

Query: 901 VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK 960
           VDNEGEENSTNG+KLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRG+GGRTSQASEKK
Sbjct: 901 VDNEGEENSTNGQKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGKGGRTSQASEKK 960

Query: 961 SGRGSGSATKRKR 974
            GRGSGSATKRKR
Sbjct: 961 GGRGSGSATKRKR 968

[Close]
BLAST of IVF0007759 vs. ExPASy TrEMBL
Match: A0A5D3B9W0 (Replication factor C subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00420 PE=3 SV=1)

HSP 1 Score: 1771.9 bits (4588), Expect = 0.0e+00
Identity = 934/944 (98.94%), Postives = 936/944 (99.15%), Query Frame = 0 

Query: 30  LEKSISAELQSGKTGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES 89
           L+  IS  L +   GPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES
Sbjct: 31  LDAQISGSLDT--LGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES 90

Query: 90  PAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ 149
           PAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ
Sbjct: 91  PAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ 150

Query: 150 KPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPP 209
           KPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPP
Sbjct: 151 KPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPP 210

Query: 210 HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE 269
           HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE
Sbjct: 211 HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE 270

Query: 270 DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ 329
           DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ
Sbjct: 271 DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ 330

Query: 330 AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN 389
           AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN
Sbjct: 331 AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN 390

Query: 390 FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD 449
           FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD
Sbjct: 391 FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD 450

Query: 450 AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS 509
           AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS
Sbjct: 451 AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS 510

Query: 510 IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL 569
           IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL
Sbjct: 511 IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL 570

Query: 570 EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS 629
           EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS
Sbjct: 571 EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS 630

Query: 630 GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI 689
           GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI
Sbjct: 631 GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI 690

Query: 690 INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM 749
           INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM
Sbjct: 691 INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM 750

Query: 750 RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI 809
           RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI
Sbjct: 751 RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI 810

Query: 810 SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP 869
           SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP
Sbjct: 811 SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP 870

Query: 870 KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV 929
           KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV
Sbjct: 871 KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV 930

Query: 930 QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR 974
           QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR
Sbjct: 931 QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR 972

[Close]
BLAST of IVF0007759 vs. ExPASy TrEMBL
Match: A0A5A7V0R1 (Replication factor C subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001180 PE=3 SV=1)

HSP 1 Score: 1767.7 bits (4577), Expect = 0.0e+00
Identity = 932/944 (98.73%), Postives = 935/944 (99.05%), Query Frame = 0 

Query: 30  LEKSISAELQSGKTGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES 89
           L+  IS  L +   GPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES
Sbjct: 31  LDAQISGSLDT--LGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES 90

Query: 90  PAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ 149
           PAKRKFQKYNGESPKASPLKKSNKIDD+DDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ
Sbjct: 91  PAKRKFQKYNGESPKASPLKKSNKIDDNDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ 150

Query: 150 KPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPP 209
           KPVEMEASDDEETKGTDSSLKPSGRGRGGRG SAATIGGRGRGGGGRGGFMNFGERKDPP
Sbjct: 151 KPVEMEASDDEETKGTDSSLKPSGRGRGGRGSSAATIGGRGRGGGGRGGFMNFGERKDPP 210

Query: 210 HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE 269
           HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE
Sbjct: 211 HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE 270

Query: 270 DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ 329
           DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ
Sbjct: 271 DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ 330

Query: 330 AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN 389
           AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN
Sbjct: 331 AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN 390

Query: 390 FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD 449
           FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD
Sbjct: 391 FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD 450

Query: 450 AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS 509
           AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS
Sbjct: 451 AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS 510

Query: 510 IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL 569
           IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL
Sbjct: 511 IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL 570

Query: 570 EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS 629
           EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS
Sbjct: 571 EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS 630

Query: 630 GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI 689
           GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI
Sbjct: 631 GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI 690

Query: 690 INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM 749
           INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM
Sbjct: 691 INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM 750

Query: 750 RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI 809
           RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI
Sbjct: 751 RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI 810

Query: 810 SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP 869
           SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP
Sbjct: 811 SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP 870

Query: 870 KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV 929
           KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV
Sbjct: 871 KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV 930

Query: 930 QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR 974
           QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR
Sbjct: 931 QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR 972

[Close]
BLAST of IVF0007759 vs. ExPASy TrEMBL
Match: A0A6J1DHR4 (Replication factor C subunit 1 OS=Momordica charantia OX=3673 GN=LOC111020593 PE=3 SV=1)

HSP 1 Score: 1603.6 bits (4151), Expect = 0.0e+00
Identity = 862/981 (87.87%), Postives = 903/981 (92.05%), Query Frame = 0 

Query: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60
           M DIRKWFMKAHDKDNGS  K AKPA S+ EK+ +AE QSGKTG SGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKDNGSALKHAKPAASNSEKAATAEPQSGKTGLSGGESTGRRITSKYF 60

Query: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120
           ASEKQK+KD +E E  PI  KSPQD KESPAKRK QK + ESPKA P KK NK DD+DDD
Sbjct: 61  ASEKQKSKDAKEIEGLPIKRKSPQDAKESPAKRKSQKDSEESPKAPPSKKLNKTDDNDDD 120

Query: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180
            VL SS+KN+S+VTPNKKLKSGSGKGITQKPVE+E SDDEE KGT+SSLKPSGRGRG RG
Sbjct: 121 FVLSSSRKNLSDVTPNKKLKSGSGKGITQKPVEIEESDDEEAKGTESSLKPSGRGRGARG 180

Query: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
            SAAT+ GRGR GGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
Sbjct: 181 SSAATVSGRGR-GGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300
           EEAEDLIKRHGGR+TGS+SKKTNYLLCDEDIGGRKSSKAKELGT FLTEDGLFDMIRAS 
Sbjct: 241 EEAEDLIKRHGGRITGSISKKTNYLLCDEDIGGRKSSKAKELGTAFLTEDGLFDMIRASS 300

Query: 301 -KKAPPRQDPKKSMVKSEESPTEKKFQK---VQAKSHKDLTAGASPAKQKSRTAEFSNLT 360
             KAPPRQ+ KKS+VKS ESPTEK  QK   VQAK+ KD TAGASPAKQKSRT EFS+LT
Sbjct: 301 DTKAPPRQESKKSVVKSLESPTEKNSQKVPAVQAKTRKDFTAGASPAKQKSRTVEFSSLT 360

Query: 361 WTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGG 420
           WTEKYRPKV NDIIGNQSLVKQLHDWLAHWNENF D  SKKK KK +DS AKKAVLLCGG
Sbjct: 361 WTEKYRPKVSNDIIGNQSLVKQLHDWLAHWNENFFDAQSKKKGKKLNDSSAKKAVLLCGG 420

Query: 421 PGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFK 480
           PGIGKTTSAKLVSQMLG++AIEVNASDNRGKSDAKIQKGI GSNANSIKELISNESLHF+
Sbjct: 421 PGIGKTTSAKLVSQMLGYQAIEVNASDNRGKSDAKIQKGISGSNANSIKELISNESLHFR 480

Query: 481 MDQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYC 540
            +QPK  KTVLIMDEVDGMSAGDRGGVADLIASIK SKIPIICICNDRYSQKLKSLVNYC
Sbjct: 481 TNQPKRPKTVLIMDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYC 540

Query: 541 LILSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSV 600
           LILSFRKPTKQQMAKR +QVANAEGLQVNEIALEELAERVNGDMRMALNQLQY+SLSM V
Sbjct: 541 LILSFRKPTKQQMAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPV 600

Query: 601 IKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENY 660
           IKYDDIRQRLLSS KDEDISPFTAVDKLFGFNSGKLRMDE ++LSMSD DLVPLLIQENY
Sbjct: 601 IKYDDIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENY 660

Query: 661 INYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPAS 720
           INYRPS VSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSS IASCIIPAS
Sbjct: 661 INYRPSSVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPAS 720

Query: 721 LLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVEN 780
           LLHGQRETLEQ ERNFNRF AWLGKNSTFGKNMRLLEDLHVHILASRESCSGR+HLRVEN
Sbjct: 721 LLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVEN 780

Query: 781 LTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPA 840
           LTLFLKRLTEPLHTLPKDEAVK VVE MSLYSISQEDFDTV+ELSKFQGRKNPLDGVAPA
Sbjct: 781 LTLFLKRLTEPLHTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPA 840

Query: 841 VKAALTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESD 900
           VKAALTKAYKE SKTHMVRAADLITL G+KKAPKKRIAAILEP EDT+EGAGG+TL ESD
Sbjct: 841 VKAALTKAYKEVSKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESD 900

Query: 901 DENSVDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGR-TSQ 960
           DE+++DNEG E+STNGEKLQLELQSLNKKGMQVQLDLKGV++SSAKKSGGRG+GGR +SQ
Sbjct: 901 DEDALDNEGAEDSTNGEKLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQ 960

Query: 961 ASEKKS---GRGSGSATKRKR 974
           ASEKK    GRGSGSATKRKR
Sbjct: 961 ASEKKGGGRGRGSGSATKRKR 980

[Close]
BLAST of IVF0007759 vs. NCBI nr
Match: XP_008449609.1 (PREDICTED: replication factor C subunit 1 [Cucumis melo])

HSP 1 Score: 1858 bits (4812), Expect = 0.0
Identity = 973/973 (100.00%), Postives = 973/973 (100.00%), Query Frame = 0 

Query: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60
           MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF
Sbjct: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60

Query: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120
           ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD
Sbjct: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120

Query: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180
           AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG
Sbjct: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180

Query: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
           LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
Sbjct: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300
           EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG
Sbjct: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300

Query: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK 360
           KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK
Sbjct: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK 360

Query: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420
           YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG
Sbjct: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420

Query: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP 480
           KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP
Sbjct: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP 480

Query: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540
           KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS
Sbjct: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540

Query: 541 FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600
           FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD
Sbjct: 541 FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600

Query: 601 DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660
           DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR
Sbjct: 601 DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660

Query: 661 PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG 720
           PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG
Sbjct: 661 PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG 720

Query: 721 QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780
           QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF
Sbjct: 721 QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780

Query: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840
           LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA
Sbjct: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840

Query: 841 LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900
           LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS
Sbjct: 841 LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900

Query: 901 VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK 960
           VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK
Sbjct: 901 VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK 960

Query: 961 SGRGSGSATKRKR 973
           SGRGSGSATKRKR
Sbjct: 961 SGRGSGSATKRKR 973

[Close]
BLAST of IVF0007759 vs. NCBI nr
Match: XP_011657597.1 (replication factor C subunit 1 [Cucumis sativus] >XP_031743305.1 replication factor C subunit 1 [Cucumis sativus] >KGN48060.1 hypothetical protein Csa_002963 [Cucumis sativus])

HSP 1 Score: 1783 bits (4617), Expect = 0.0
Identity = 937/973 (96.30%), Postives = 953/973 (97.94%), Query Frame = 0 

Query: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60
           MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKS SA    GKTGPSGGES GR+ITSKYF
Sbjct: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASA----GKTGPSGGESAGRQITSKYF 60

Query: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120
           ASEKQ+AKD EETEV PII KSP+DTKESPAKRKFQKYN ESPKASPLKKSNK+DD+DDD
Sbjct: 61  ASEKQEAKDAEETEVLPIIRKSPRDTKESPAKRKFQKYNEESPKASPLKKSNKVDDNDDD 120

Query: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180
           AVL SSKKNMSEVTPNKKLKSGSGKGITQKPVE+EASDDEETKGTDSSLKPSGRGRGG+G
Sbjct: 121 AVLSSSKKNMSEVTPNKKLKSGSGKGITQKPVEIEASDDEETKGTDSSLKPSGRGRGGKG 180

Query: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
            SAATIGGRGRG GGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
Sbjct: 181 SSAATIGGRGRG-GGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300
           EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG
Sbjct: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300

Query: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK 360
           KKAPPRQDPKKS+VKSEESPT+K FQKVQAKSHKDL AGASPAKQKS TAEFSNLTWTEK
Sbjct: 301 KKAPPRQDPKKSVVKSEESPTKKNFQKVQAKSHKDLAAGASPAKQKSGTAEFSNLTWTEK 360

Query: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420
           YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG
Sbjct: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420

Query: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP 480
           KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKM+QP
Sbjct: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMNQP 480

Query: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540
           KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS
Sbjct: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540

Query: 541 FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600
           FRKPTKQQMAKRL+QVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD
Sbjct: 541 FRKPTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600

Query: 601 DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660
           DIRQRLLSS+KDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR
Sbjct: 601 DIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660

Query: 661 PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG 720
           PS VSKDD GIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSC+ASCIIPASLLHG
Sbjct: 661 PSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASLLHG 720

Query: 721 QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780
           QRETLEQ+ERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF
Sbjct: 721 QRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780

Query: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840
           LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA
Sbjct: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840

Query: 841 LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900
           LTKAYKEASKTHMVRAADLI LPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS
Sbjct: 841 LTKAYKEASKTHMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900

Query: 901 VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK 960
           VDNEGEENSTNG+KLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRG+GGRTSQASEKK
Sbjct: 901 VDNEGEENSTNGQKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGKGGRTSQASEKK 960

Query: 961 SGRGSGSATKRKR 973
            GRGSGSATKRKR
Sbjct: 961 GGRGSGSATKRKR 968

[Close]
BLAST of IVF0007759 vs. NCBI nr
Match: TYJ96083.1 (replication factor C subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1777 bits (4602), Expect = 0.0
Identity = 934/944 (98.94%), Postives = 936/944 (99.15%), Query Frame = 0 

Query: 30  LEKSISAELQSGKTGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES 89
           L+  IS  L +   GPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES
Sbjct: 31  LDAQISGSLDT--LGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES 90

Query: 90  PAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ 149
           PAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ
Sbjct: 91  PAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ 150

Query: 150 KPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPP 209
           KPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPP
Sbjct: 151 KPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPP 210

Query: 210 HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE 269
           HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE
Sbjct: 211 HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE 270

Query: 270 DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ 329
           DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ
Sbjct: 271 DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ 330

Query: 330 AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN 389
           AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN
Sbjct: 331 AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN 390

Query: 390 FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD 449
           FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD
Sbjct: 391 FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD 450

Query: 450 AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS 509
           AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS
Sbjct: 451 AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS 510

Query: 510 IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL 569
           IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL
Sbjct: 511 IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL 570

Query: 570 EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS 629
           EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS
Sbjct: 571 EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS 630

Query: 630 GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI 689
           GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI
Sbjct: 631 GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI 690

Query: 690 INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM 749
           INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM
Sbjct: 691 INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM 750

Query: 750 RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI 809
           RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI
Sbjct: 751 RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI 810

Query: 810 SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP 869
           SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP
Sbjct: 811 SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP 870

Query: 870 KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV 929
           KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV
Sbjct: 871 KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV 930

Query: 930 QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR 973
           QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR
Sbjct: 931 QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR 972

[Close]
BLAST of IVF0007759 vs. NCBI nr
Match: KAA0061743.1 (replication factor C subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 1773 bits (4591), Expect = 0.0
Identity = 932/944 (98.73%), Postives = 935/944 (99.05%), Query Frame = 0 

Query: 30  LEKSISAELQSGKTGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES 89
           L+  IS  L +   GPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES
Sbjct: 31  LDAQISGSLDT--LGPSGGESTGRRITSKYFASEKQKAKDTEETEVPPIIGKSPQDTKES 90

Query: 90  PAKRKFQKYNGESPKASPLKKSNKIDDDDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ 149
           PAKRKFQKYNGESPKASPLKKSNKIDD+DDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ
Sbjct: 91  PAKRKFQKYNGESPKASPLKKSNKIDDNDDDAVLCSSKKNMSEVTPNKKLKSGSGKGITQ 150

Query: 150 KPVEMEASDDEETKGTDSSLKPSGRGRGGRGLSAATIGGRGRGGGGRGGFMNFGERKDPP 209
           KPVEMEASDDEETKGTDSSLKPSGRGRGGRG SAATIGGRGRGGGGRGGFMNFGERKDPP
Sbjct: 151 KPVEMEASDDEETKGTDSSLKPSGRGRGGRGSSAATIGGRGRGGGGRGGFMNFGERKDPP 210

Query: 210 HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE 269
           HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE
Sbjct: 211 HKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDE 270

Query: 270 DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ 329
           DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ
Sbjct: 271 DIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSMVKSEESPTEKKFQKVQ 330

Query: 330 AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN 389
           AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN
Sbjct: 331 AKSHKDLTAGASPAKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNEN 390

Query: 390 FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD 449
           FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD
Sbjct: 391 FLDVGSKKKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSD 450

Query: 450 AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS 509
           AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS
Sbjct: 451 AKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIAS 510

Query: 510 IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL 569
           IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL
Sbjct: 511 IKMSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIAL 570

Query: 570 EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS 629
           EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS
Sbjct: 571 EELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNS 630

Query: 630 GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI 689
           GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI
Sbjct: 631 GKLRMDERIDLSMSDLDLVPLLIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDI 690

Query: 690 INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM 749
           INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM
Sbjct: 691 INVQIRRHRQWQLSQSSCIASCIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNM 750

Query: 750 RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI 809
           RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI
Sbjct: 751 RLLEDLHVHILASRESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSI 810

Query: 810 SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP 869
           SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP
Sbjct: 811 SQEDFDTVLELSKFQGRKNPLDGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAP 870

Query: 870 KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV 929
           KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV
Sbjct: 871 KKRIAAILEPTEDTVEGAGGETLVESDDENSVDNEGEENSTNGEKLQLELQSLNKKGMQV 930

Query: 930 QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR 973
           QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR
Sbjct: 931 QLDLKGVEDSSAKKSGGRGRGGRTSQASEKKSGRGSGSATKRKR 972

[Close]
BLAST of IVF0007759 vs. NCBI nr
Match: XP_038901195.1 (replication factor C subunit 1 isoform X1 [Benincasa hispida] >XP_038901196.1 replication factor C subunit 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1704 bits (4412), Expect = 0.0
Identity = 904/974 (92.81%), Postives = 928/974 (95.28%), Query Frame = 0 

Query: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60
           M DIRKWFMKAHDK+NGSGSKKAKPAPS+ EKS +AELQSGKTG SGGESTGRRITSKYF
Sbjct: 1   MADIRKWFMKAHDKENGSGSKKAKPAPSNSEKSATAELQSGKTGLSGGESTGRRITSKYF 60

Query: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120
           ASEKQKA DT+ETE  PI  KSPQDTKESP KRKFQ  N ESPKA PLKKSNKIDDD   
Sbjct: 61  ASEKQKANDTKETEESPIKRKSPQDTKESPTKRKFQTDNEESPKALPLKKSNKIDDD--- 120

Query: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180
           AV  SS+KNMSEVTPNKKLKSGSGKGI QK VE+EASDDEETKGTDSSLK SGRG+GGRG
Sbjct: 121 AVFSSSRKNMSEVTPNKKLKSGSGKGIAQKSVEIEASDDEETKGTDSSLKSSGRGKGGRG 180

Query: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
            SA T+GGRGRG GGRGGFMNFGERKDPPHKGEKEVPEGA +CLAGLTFVISGTLDSLER
Sbjct: 181 SSATTVGGRGRG-GGRGGFMNFGERKDPPHKGEKEVPEGASECLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300
           EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG
Sbjct: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300

Query: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK 360
           KKAPP+Q PKKS+VKS ESPTEK FQKVQAKS KDLTAGASPAKQKSRTAEFSNLTWTEK
Sbjct: 301 KKAPPKQHPKKSVVKSMESPTEKNFQKVQAKSRKDLTAGASPAKQKSRTAEFSNLTWTEK 360

Query: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG 420
           YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKK +DSGAKKAVLLCGGPGIG
Sbjct: 361 YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKLNDSGAKKAVLLCGGPGIG 420

Query: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP 480
           KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKI KGIGGSNANSIKELISNESLHF+M+QP
Sbjct: 421 KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIHKGIGGSNANSIKELISNESLHFRMNQP 480

Query: 481 KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540
           KH KTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS
Sbjct: 481 KHPKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS 540

Query: 541 FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600
           +RKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD
Sbjct: 541 YRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD 600

Query: 601 DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660
           DIRQRLLSS KDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR
Sbjct: 601 DIRQRLLSSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR 660

Query: 661 PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG 720
           PS +SKDDNGIKRMDLIAR AESIADGDIINVQIRRHRQWQLSQSSCIASC+IPASLLHG
Sbjct: 661 PSAISKDDNGIKRMDLIARTAESIADGDIINVQIRRHRQWQLSQSSCIASCVIPASLLHG 720

Query: 721 QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF 780
           QRETLEQ ERNFNRFGAWLGKNST GKNMRLLEDLHVHILASRESCSGRE LRVENLTLF
Sbjct: 721 QRETLEQGERNFNRFGAWLGKNSTSGKNMRLLEDLHVHILASRESCSGREQLRVENLTLF 780

Query: 781 LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840
           LKRLTEPLHTLPKDEAVK VVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA
Sbjct: 781 LKRLTEPLHTLPKDEAVKIVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA 840

Query: 841 LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS 900
           LTKAYKE SKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGG+TL ESD+ENS
Sbjct: 841 LTKAYKEVSKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGDTLAESDEENS 900

Query: 901 VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK 960
           +DNEG E+S NGEKLQLELQSLNKKGMQVQLDLKG+E+SSAKKSGGRGRGGR+SQASEKK
Sbjct: 901 LDNEGAEDSANGEKLQLELQSLNKKGMQVQLDLKGMENSSAKKSGGRGRGGRSSQASEKK 960

Query: 961 SG-RGSGSATKRKR 973
            G RGSGSATKRKR
Sbjct: 961 GGGRGSGSATKRKR 970

[Close]
BLAST of IVF0007759 vs. TAIR 10
Match: AT5G22010.1 (replication factor C1 )

HSP 1 Score: 1169.1 bits (3023), Expect = 0.0e+00
Identity = 646/985 (65.58%), Postives = 758/985 (76.95%), Query Frame = 0 

Query: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF 60
           M DIRKWFMKAH+K NGS  K        ++ +        +      E+  RR TSKYF
Sbjct: 1   MSDIRKWFMKAHEKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYF 60

Query: 61  ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDDDDD 120
             +K K KD +E E               PAKRK +  + +  K  P K +  +DDDDDD
Sbjct: 61  GKDKTKVKDEKEVEA-------------IPAKRKLKTESDDLVKPRPRKVTKVVDDDDDD 120

Query: 121 AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG 180
             +  S+K   + TP+KKLKSGSG+GI  K V+ +  DD E K  ++ LK +GRGRGGR 
Sbjct: 121 FDVPISRKT-RDTTPSKKLKSGSGRGIASKTVDNDDDDDGEDK--ETPLKSAGRGRGGRA 180

Query: 181 LSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 240
              A+ GGRGR GGGRGGFMNFGERKDPPHKGEKEVPEG PDCLAGLTFVISGTLDSLER
Sbjct: 181 APGASTGGRGR-GGGRGGFMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLER 240

Query: 241 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 300
           EEAEDLIKRHGGR+TGSVSKKT YLLCDEDIGGRKS KAKELGT FLTEDGLFD+IR+S 
Sbjct: 241 EEAEDLIKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDIIRSS- 300

Query: 301 KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAG----------ASPAKQKSRTA 360
                 +  KKS+ +     TEK     +    K+ T G            PAK K++  
Sbjct: 301 ------KPVKKSLPERSNKGTEKICAPPKTSPQKEETRGKPLAKSSPKKVPPAKGKNKII 360

Query: 361 EFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKA 420
           E ++L WTEKYRPKVPN+I+GNQSLV QLH+WL+HW++ F   GSK K KK +D+G+KKA
Sbjct: 361 E-TSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKA 420

Query: 421 VLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISN 480
           VLL G PGIGKTTSAKLVSQMLGF+A+EVNASD+RGK+++ I KGIGGSNANS+KEL++N
Sbjct: 421 VLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNN 480

Query: 481 ESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLK 540
           E++    D+ KH KTVLIMDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLK
Sbjct: 481 EAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLK 540

Query: 541 SLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYL 600
           SLVNYCL L++RKPTKQQMAKRL+ +A AEGL++NEIALEELAERVNGD+R+A+NQLQY+
Sbjct: 541 SLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYM 600

Query: 601 SLSMSVIKYDDIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPL 660
           SLSMSVIKYDDIRQRLLSS KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD DLVPL
Sbjct: 601 SLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPL 660

Query: 661 LIQENYINYRPSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIAS 720
           LIQENY+NYRPSG  KD+   KRMDL+ARAAESIADGDIINVQIRR+RQWQLSQS C+AS
Sbjct: 661 LIQENYLNYRPSG--KDE--AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVAS 720

Query: 721 CIIPASLLHGQRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRE 780
            I+PASLLHG RE LEQ ERNFNRFG WLGKNST GKN RL+EDLHVH+LASRES +GRE
Sbjct: 721 SILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRE 780

Query: 781 HLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPL 840
            LRV+ L L L RLT PL TLPKDEAV  VV+FM+ YSISQEDFDT+LEL KF+GR+NP+
Sbjct: 781 TLRVDYLPLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPM 840

Query: 841 DGVAPAVKAALTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGE 900
           +GV P VKAALTK Y E +KT MVR AD++ LPG+KKAPKKRIAA+LEPT D++    GE
Sbjct: 841 EGVPPPVKAALTKKYNEMNKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGE 900

Query: 901 TLVESDDENSVD-NEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGR 960
            L ++++ N  D  E  E +T+GEKL+  L++LN +G+QV+LDLKG   S ++K+ G+GR
Sbjct: 901 PLADNEEGNGSDAEEDSEEATDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGR 956

Query: 961 G-GRTSQASEKKSGRGSGSATKRKR 974
           G G+ +  S +K   G GS  KRKR
Sbjct: 961 GRGKAADTSAEKKATGRGSGAKRKR 956

[Close]
BLAST of IVF0007759 vs. TAIR 10
Match: AT1G04730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-20
Identity = 82/285 (28.77%), Postives = 130/285 (45.61%), Query Frame = 0 

Query: 387 NENFLDVGSK-KKVKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNR 446
           N N  D+     K  K +    +K +LLCG PG+GKTT A + ++  G+  +E+NASD R
Sbjct: 315 NTNTADINDLWNKKSKLTGPPEQKILLLCGAPGLGKTTLAHIAAKHCGYRVVEINASDER 374

Query: 447 GKSDAKIQKGIGGSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVAD 506
             S  + +          I +++   S+     +PK     L++DE+DG + GD  G  D
Sbjct: 375 SASAIETR----------ILDVVQMNSVTAD-SRPK----CLVIDEIDG-ALGDGKGAVD 434

Query: 507 LIASIKMSK---------------------------IPIICICNDRYSQKLKSLVNYCLI 566
           +I  + +++                            P+ICICND Y+  L+ L     +
Sbjct: 435 VILKMVLAERKHATGKENVENVKTSSKKDRRTAPLSRPVICICNDLYAPALRPLRQIAKV 494

Query: 567 LSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIK 626
             F +PT  ++  RL  + N EG++    AL  LAE    D+R  LN LQ+L      I 
Sbjct: 495 HIFVQPTVSRVVNRLKYICNMEGMKARSFALSALAEYTECDIRSCLNTLQFLYKKKETIN 554

Query: 627 YDDIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMS 644
             DI  +++  RKD   S F    ++  F + K++ +   D S S
Sbjct: 555 VIDIGSQVV-GRKDMSKSLFDIWKEI--FTTRKMKRERSNDASGS 580

[Close]
BLAST of IVF0007759 vs. TAIR 10
Match: AT1G63160.1 (replication factor C 2 )

HSP 1 Score: 73.9 bits (180), Expect = 7.8e-13
Identity = 71/265 (26.79%), Postives = 114/265 (43.02%), Query Frame = 0 

Query: 343 AKQKSRTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKA 402
           +   + T +  N  W EKYRP    DI+GN+  V +L                    +  
Sbjct: 3   SSSSTSTGDGYNEPWVEKYRPSKVVDIVGNEDAVSRL--------------------QVI 62

Query: 403 SDSGAKKAVLLCGGPGIGKTTS-AKLVSQMLGFE----AIEVNASDNRGKSDAKIQKGIG 462
           +  G    ++L G PG GKTTS   L  ++LG       +E+NASD+RG    +      
Sbjct: 63  ARDGNMPNLILSGPPGTGKTTSILALAHELLGTNYKEAVLELNASDDRGIDVVR------ 122

Query: 463 GSNANSIKELISNESLHFKMDQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPI 522
               N IK          K+  P     V+I+DE D M++G +  +   I  I  +    
Sbjct: 123 ----NKIKMFAQK-----KVTLPPGRHKVVILDEADSMTSGAQQALRRTI-EIYSNSTRF 182

Query: 523 ICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVN 582
              CN   ++ ++ + + C ++ F + + QQ+  RL+ V  AE +      LE +    +
Sbjct: 183 ALACNTS-AKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVPYVPEGLEAIIFTAD 230

Query: 583 GDMRMALNQLQYLSLSMSVIKYDDI 603
           GDMR ALN LQ      S +  +++
Sbjct: 243 GDMRQALNNLQATFSGFSFVNQENV 230

The following BLAST results are available for this feature:
BLAST of IVF0007759 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C5870.0e+0065.58Replication factor C subunit 1 OS=Arabidopsis thaliana OX=3702 GN=RFC1 PE=2 SV=1[more]
Q2R2B42.6e-30358.65Replication factor C subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC1 ... [more]
P356019.0e-9931.17Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2[more]
P352513.9e-9431.41Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4[more]
P356003.6e-8730.19Replication factor C subunit 1 OS=Drosophila melanogaster OX=7227 GN=Gnf1 PE=1 S... [more]
BLAST of IVF0007759 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BLT10.0e+00100.00Replication factor C subunit 1 OS=Cucumis melo OX=3656 GN=LOC103491443 PE=3 SV=1[more]
A0A0A0KEG60.0e+0096.30Replication factor C subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_6G426950 PE=3 S... [more]
A0A5D3B9W00.0e+0098.94Replication factor C subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7V0R10.0e+0098.73Replication factor C subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A6J1DHR40.0e+0087.87Replication factor C subunit 1 OS=Momordica charantia OX=3673 GN=LOC111020593 PE... [more]
BLAST of IVF0007759 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008449609.10.0100.00PREDICTED: replication factor C subunit 1 [Cucumis melo][more]
XP_011657597.10.096.30replication factor C subunit 1 [Cucumis sativus] >XP_031743305.1 replication fac... [more]
TYJ96083.10.098.94replication factor C subunit 1 [Cucumis melo var. makuwa][more]
KAA0061743.10.098.73replication factor C subunit 1 [Cucumis melo var. makuwa][more]
XP_038901195.10.092.81replication factor C subunit 1 isoform X1 [Benincasa hispida] >XP_038901196.1 re... [more]
BLAST of IVF0007759 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22010.10.0e+0065.58replication factor C1 [more]
AT1G04730.11.3e-2028.77P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT1G63160.17.8e-1326.79replication factor C 2 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 407..545
e-value: 1.2E-8
score: 44.8
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 221..299
e-value: 6.5E-15
score: 65.5
IPR001357BRCT domainPFAMPF00533BRCTcoord: 221..296
e-value: 1.4E-15
score: 57.4
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 219..297
score: 15.09226
NoneNo IPR availableGENE3D1.10.8.60coord: 544..614
e-value: 3.0E-17
score: 63.9
NoneNo IPR availableGENE3D1.20.272.10coord: 616..728
e-value: 1.9E-28
score: 100.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 880..973
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 910..927
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR23389:SF6REPLICATION FACTOR C SUBUNIT 1coord: 15..944
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 15..944
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 544..602
e-value: 4.93346E-15
score: 68.3245
NoneNo IPR availableCDDcd00009AAAcoord: 396..544
e-value: 3.26457E-14
score: 69.0971
NoneNo IPR availableCDDcd17752BRCT_RFC1coord: 219..297
e-value: 2.54989E-43
score: 149.671
IPR012178Replication factor C subunit 1PIRSFPIRSF036578RFC1coord: 1..947
e-value: 4.1E-253
score: 839.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 355..543
e-value: 9.5E-49
score: 167.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 355..604
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 196..298
e-value: 5.2E-31
score: 108.8
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 219..298
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 411..523
e-value: 1.7E-10
score: 41.4
IPR013725DNA replication factor RFC1, C-terminalPFAMPF08519RFC1coord: 684..846
e-value: 1.9E-41
score: 141.9
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 615..760

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007759.1IVF0007759.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
cellular_component GO:0005663 DNA replication factor C complex
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003689 DNA clamp loader activity