IVF0007552 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGGGTCACTTGAAGAGTTTCTTTGGCACCGTGTGGAATGCTTTTTTGTAAATGCTGGGAGAGTCATATGTATCTTTAGTTGGTGTTATTGTATTACTGATTGTAGTAGTAACATTTATTCCTAGGAACATCCAAGAAGGAAAAGGGTAATAATTAGGCTTCTTCATGTTTCTGTACATCTTGCTGCAACACCTTTTCTTATGTTGTTATTGGAACTGGGATTGGAGACATGTGCCTATTATGATTTACTAGCAACATCAGGTACTGTAGTGAGTTCGTTACTGTTTAATGCAGCCTTACCAGTTTTTCATGACCACGAGAAATGATGGGAAAAATATAGTTATACTTCACTGTATTGTTTTAGCCTTTTAGGCGTACAATAGAAAAAATGAGAATTTGAAGAGATTTGACTTCTTTCTTGTTGGAGATTATCTAGAAAAAGGAGGGGTTCAATGTTTCTGATTATGTAGTATTAGTGGTTGAATTTTTTTTAACCAAGTCTCATGCCTCTACTTACACTGATCTTTGGTTCCAGGGAAGGAGATGTATCGTTGCCGCAAATTCCTGCTAAGTATTTGAGAATAAAGTAAACTCAGTTTTAACACTCGTTCAATATAGACACCCCTACTTATTCTTATTTTAGATGTCAAGTAATTTTATCATATATTACTAAGGTGTATACAAGCACCTTTCATGTCTATTTCTTTCAGCCTAACTAAAAGTTTCTCCATGACTTTTGTAAATGGTTATTATTTTTTATCTTAGACCAAGAAGTCTCAATTATACCTTTGCTTGCACACATCGTGTACGTGAGAAAATTGATACTTAAACTGTTTGTAGAAGTGCCATCGTTGATAATAAACCCTGCTAATTTCTTCGCTCCTCACTCTGAATGTTTGGATTTGTAAAACCACCATTGTTGATGCTTAGACCATGTTAACTTCTTCGCTTGGTGCTCTGTGCGTTTGGGTTTGTAAAAACACCATTGTTAAGACTTAAATCCGCACTAAGTTATTTGATTGTTACTCTGGACGTTTGGGTTTTTAAAAATACCATTCTTGACTAGGAGTTCATTCAAAGTATATTGTTATATTTTTAGTTTTTTTCACAGGGGCAGAAACTTGCCAATATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCACCCAAGTGAATCGGAGGTGAAAACAAAATCTCATATTCTTTAGTTTAATTGAAACTCTAATCTAAGAGCCTTTCCTGTTCATACTTGGACTTGTCATTTTATGTCTTATGTTTGTGGATTTATATTTGCAGGTTGAAGTCAAGCATATGGGACATCCAGTAGTTCACACACTAGATTTGCATAGTTTAGTTGATTTGTGGCTATAAAACAACATCGACCTCTGAAAAGATCCCGATATCGATCGACTCATCAGTAGAGGATTTCACTATGATTTGACTTTAAAGTGAATTTTCTTTTGTGCATTGTAG TTTGGGTCACTTGAAGAGTTTCTTTGGCACCGTGTGGAATGCTTTTTTGTAAATGCTGGGAGAGTCATATGTATCTTTAGTTGGTGTTATTGTATTACTGATTGTAGTAGTAACATTTATTCCTAGGAACATCCAAGAAGGAAAAGGGTAATAATTAGGCTTCTTCATGTTTCTGTACATCTTGCTGCAACACCTTTTCTTATGTTGTTATTGGAACTGGGATTGGAGACATGTGCCTATTATGATTTACTAGCAACATCAGGTACTGTAGTGAGTTCGTTACTGTTTAATGCAGCCTTACCAGTTTTTCATGACCACGAGAAATGATGGGAAAAATATAGTTATACTTCACTGTATTGTTTTAGCCTTTTAGGCGTACAATAGAAAAAATGAGAATTTGAAGAGATTTGACTTCTTTCTTGTTGGAGATTATCTAGAAAAAGGAGGGGTTCAATGTTTCTGATTATGTAGTATTAGTGGTTGAATTTTTTTTAACCAAGTCTCATGCCTCTACTTACACTGATCTTTGGTTCCAGGGAAGGAGATGTATCGTTGCCGCAAATTCCTGCTAAGTATTTGAGAATAAAGGGCAGAAACTTGCCAATATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCACCCAAGTGAATCGGAGGTTGAAGTCAAGCATATGGGACATCCAGTAGTTCACACACTAGATTTGCATAGTTTAGTTGATTTGTGGCTATAAAACAACATCGACCTCTGAAAAGATCCCGATATCGATCGACTCATCAGTAGAGGATTTCACTATGATTTGACTTTAAAGTGAATTTTCTTTTGTGCATTGTAG ATGCCTCTACTTACACTGATCTTTGGTTCCAGGGAAGGAGATGTATCGTTGCCGCAAATTCCTGCTAAGTATTTGAGAATAAAGGGCAGAAACTTGCCAATATCATTTGTCCAGAAGTACCTTATGAGAAAGCTGGATCACCCAAGTGAATCGGAGGTTGAAGTCAAGCATATGGGACATCCAGTAGTTCACACACTAGATTTGCATAGTTTAGTTGATTTGTGGCTATAA MPLLTLIFGSREGDVSLPQIPAKYLRIKGRNLPISFVQKYLMRKLDHPSESEVEVKHMGHPVVHTLDLHSLVDLWL Homology
BLAST of IVF0007552 vs. ExPASy Swiss-Prot
Match: Q94AY3 (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.5e-20 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of IVF0007552 vs. ExPASy Swiss-Prot
Match: Q9M9Y4 (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2) HSP 1 Score: 87.4 bits (215), Expect = 7.5e-17 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of IVF0007552 vs. ExPASy Swiss-Prot
Match: Q9LS86 (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.1e-07 Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of IVF0007552 vs. ExPASy Swiss-Prot
Match: G3XKQ9 (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 2.5e-04 Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of IVF0007552 vs. ExPASy TrEMBL
Match: A0A0A0LIE4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G224300 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.1e-26 Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of IVF0007552 vs. ExPASy TrEMBL
Match: A0A5D3E3H5 (E3 ubiquitin protein ligase DRIP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001020 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25 Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of IVF0007552 vs. ExPASy TrEMBL
Match: A0A1S3BL74 (E3 ubiquitin protein ligase DRIP2-like OS=Cucumis melo OX=3656 GN=LOC103491253 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25 Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of IVF0007552 vs. ExPASy TrEMBL
Match: A0A6J1K435 (E3 ubiquitin protein ligase DRIP2 OS=Cucurbita maxima OX=3661 GN=LOC111490999 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.9e-23 Identity = 59/73 (80.82%), Postives = 63/73 (86.30%), Query Frame = 0
BLAST of IVF0007552 vs. ExPASy TrEMBL
Match: A0A6J1EY51 (E3 ubiquitin protein ligase DRIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111437273 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.9e-23 Identity = 59/73 (80.82%), Postives = 63/73 (86.30%), Query Frame = 0
BLAST of IVF0007552 vs. NCBI nr
Match: XP_004145377.1 (E3 ubiquitin protein ligase DRIP2 [Cucumis sativus] >KGN61690.1 hypothetical protein Csa_006792 [Cucumis sativus]) HSP 1 Score: 127 bits (319), Expect = 7.76e-33 Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of IVF0007552 vs. NCBI nr
Match: TYK30120.1 (E3 ubiquitin protein ligase DRIP2-like [Cucumis melo var. makuwa]) HSP 1 Score: 125 bits (315), Expect = 1.44e-32 Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of IVF0007552 vs. NCBI nr
Match: XP_038888669.1 (E3 ubiquitin protein ligase DRIP2-like isoform X2 [Benincasa hispida]) HSP 1 Score: 127 bits (318), Expect = 1.47e-32 Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of IVF0007552 vs. NCBI nr
Match: XP_008449348.1 (PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis melo]) HSP 1 Score: 125 bits (315), Expect = 2.95e-32 Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of IVF0007552 vs. NCBI nr
Match: XP_038888668.1 (E3 ubiquitin protein ligase DRIP2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 120 bits (300), Expect = 5.96e-30 Identity = 61/77 (79.22%), Postives = 66/77 (85.71%), Query Frame = 0
BLAST of IVF0007552 vs. TAIR 10
Match: AT2G30580.1 (DREB2A-interacting protein 2 ) HSP 1 Score: 99.8 bits (247), Expect = 1.0e-21 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of IVF0007552 vs. TAIR 10
Match: AT1G06770.1 (DREB2A-interacting protein 1 ) HSP 1 Score: 87.4 bits (215), Expect = 5.3e-18 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of IVF0007552 vs. TAIR 10
Match: AT1G06770.2 (DREB2A-interacting protein 1 ) HSP 1 Score: 87.4 bits (215), Expect = 5.3e-18 Identity = 41/66 (62.12%), Postives = 52/66 (78.79%), Query Frame = 0
BLAST of IVF0007552 vs. TAIR 10
Match: AT3G23060.1 (RING/U-box superfamily protein ) HSP 1 Score: 55.5 bits (132), Expect = 2.2e-08 Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of IVF0007552 vs. TAIR 10
Match: AT1G28080.1 (RING finger protein ) HSP 1 Score: 42.4 bits (98), Expect = 2.0e-04 Identity = 20/45 (44.44%), Postives = 29/45 (64.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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