IVF0007527 (gene) Melon (IVF77) v1

Overview


Name	IVF0007527
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr03: 921398 .. 922133 (+)
RNA-Seq Expression	IVF0007527
Synteny	IVF0007527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTTTCTCCCCAATTTTACTTCCCTTCCAAGCTATTTCCATTAATAATTAATCCCCCCCCCCCTCTCTCTATAAATTCCCCCCAATTTCCTCTCAACCATTTCAAAATTTCCCAATTCCTCTCTGATCTCCATACGCCCTAATCGTTAGCTATGATGAATAACTACTCTCTTGCCGAAGCCTACGTAATGGGGAAAATGAATCGCGAGAAACTGAAGAAGGAAGAAGAAGGAGAGAATACTAAGAAGAAGATGATCAGTACTAGTACCGATTCCAGCCCTAATTACGATGCGAAGAAACAAGGGTCCAGCTGGCTGTTGAGGAAAATGAAGATTCATCCAAGTAATAAAGCTAATTCTAACAACTCTGTCAAATAAATATTGTTGGAGAAAGCCGAGACATGTTGTTCAACCTCAAATTAATGCTTCATCGATTATCCTTCGTTTTGTTTCTTCAGTTGTTTTGTGTTGTTTTAATTTGTTCGTTTGTAATTCCGATTATGTATAGTTTAATTCATTGACCTAATCCAATTGGGGATTTCGTATGTATATGTATAATGGCTATTTGTGGATTCTTTGTTTGTGTGCAATCTAAGGGCTCTGGATTAGTAGCTTATAAGATTGTGCAGATTTATTTGTAACAATTTAGTTAAGTTTGAGAGGGTGATTCTCGAACATTCCATAACAAAATTTGATACGAT

mRNA sequence

TCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTTTCTCCCCAATTTTACTTCCCTTCCAAGCTATTTCCATTAATAATTAATCCCCCCCCCCCTCTCTCTATAAATTCCCCCCAATTTCCTCTCAACCATTTCAAAATTTCCCAATTCCTCTCTGATCTCCATACGCCCTAATCGTTAGCTATGATGAATAACTACTCTCTTGCCGAAGCCTACGTAATGGGGAAAATGAATCGCGAGAAACTGAAGAAGGAAGAAGAAGGAGAGAATACTAAGAAGAAGATGATCAGTACTAGTACCGATTCCAGCCCTAATTACGATGCGAAGAAACAAGGGTCCAGCTGGCTGTTGAGGAAAATGAAGATTCATCCAAGTAATAAAGCTAATTCTAACAACTCTGTCAAATAAATATTGTTGGAGAAAGCCGAGACATGTTGTTCAACCTCAAATTAATGCTTCATCGATTATCCTTCGTTTTGTTTCTTCAGTTGTTTTGTGTTGTTTTAATTTGTTCGTTTGTAATTCCGATTATGTATAGTTTAATTCATTGACCTAATCCAATTGGGGATTTCGTATGTATATGTATAATGGCTATTTGTGGATTCTTTGTTTGTGTGCAATCTAAGGGCTCTGGATTAGTAGCTTATAAGATTGTGCAGATTTATTTGTAACAATTTAGTTAAGTTTGAGAGGGTGATTCTCGAACATTCCATAACAAAATTTGATACGAT

Coding sequence (CDS)

ATGATGAATAACTACTCTCTTGCCGAAGCCTACGTAATGGGGAAAATGAATCGCGAGAAACTGAAGAAGGAAGAAGAAGGAGAGAATACTAAGAAGAAGATGATCAGTACTAGTACCGATTCCAGCCCTAATTACGATGCGAAGAAACAAGGGTCCAGCTGGCTGTTGAGGAAAATGAAGATTCATCCAAGTAATAAAGCTAATTCTAACAACTCTGTCAAATAA

Protein sequence

MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMKIHPSNKANSNNSVK

Homology

[Close]

BLAST of IVF0007527 vs. ExPASy TrEMBL
Match: E5GB38 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.0e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMK 60
          MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMK
Sbjct: 1  MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMK 60

Query: 61 IHPSNKANSNNSVK 75
          IHPSNKANSNNSVK
Sbjct: 61 IHPSNKANSNNSVK 74

[Close]

BLAST of IVF0007527 vs. NCBI nr
Match: ADN33680.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 140 bits (352), Expect = 1.42e-41
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMK 60
          MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMK
Sbjct: 1  MMNNYSLAEAYVMGKMNREKLKKEEEGENTKKKMISTSTDSSPNYDAKKQGSSWLLRKMK 60

Query: 61 IHPSNKANSNNSVK 74
          IHPSNKANSNNSVK
Sbjct: 61 IHPSNKANSNNSVK 74

The following BLAST results are available for this feature:

BLAST of IVF0007527 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0007527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GB38	7.0e-31	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of IVF0007527 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33680.1	1.42e-41	100.00	hypothetical protein [Cucumis melo subsp. melo]	[more]

BLAST of IVF0007527 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007527.2	IVF0007527.2	mRNA