IVF0007372 (gene) Melon (IVF77) v1

Overview
NameIVF0007372
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionphotosystem I assembly factor PSA3, chloroplastic
Locationchr04: 25827557 .. 25829553 (-)
RNA-Seq ExpressionIVF0007372
SyntenyIVF0007372
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAACATATATAAACGAGAGGGTGAGAATGAACAACAGTTGAGAGTCGCAGCCATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCGCCTCTTTCTCCCCCAACTTTATGGCCGCCGCCGGAGCTCGAATTCGGCCGGCGCGTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGATTTGCAAGTAAGGTGATCGGATCTCTGCCCGTGGTCGGACTGATCGCGAGAATTATGAGTGATGAAGGCGGCGTCGGCAGTGACCTTATTGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGTAAATGTGTCTCTTAATTTATGTTTATAATATCTTTTTAAATCATACTTCATTAAATTCATTATATAAATTCTTTTAAAGCTTTGCTCAGCTTACAAAAATATCTTTTTTAGTTTAGCTAAACTTTTAATTTCATAAAACTAGACCATAAATTTAAGTAATGTGTTATAATTTGTACCATAGTTTAATCATTTGCTAATTTATCTACTAATTTTAAGTTAAAAAGAATTGTGTGAAAAACTCCATAAACTCAAAAAGGTTTCATTGAAATAAAAATGTGTACTAAAATAAGTTTGACCTGAGTAAGTCAACTCATCAAATTTCAATCTTAAGAAAACATTCAACAAAAAGAAAGCTCAAGTGCCACTTTTATCTAATTTATATTTTCATTGAATCCACAGGATAATTAATTTCTCTTTTTAACTTATTTGGGGCAAGAACTAATTAAATGATTAAAATTGCAAAACTTTTCAAGGTTCAAGTGTAAAGCGTAATTTGATGAAATTGAAAGTTTAGAAGTGAAAGAGGTTGTAGTGTGCTCTAAAAAACATCAAAGATATATCGTAAATGCAACGATGTGATCAAATGAGTATTTATTAATTTAAATATATTGCAAGTTTAAGATCAAAATTACAATACTTATTAAATCAGTCCAACCAAGAAATGCAAATCATAATGTTTTGTTTTGAAGTAGAATAATTGGTTGTGATAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAGTCAGAGGAAATTTTGGAAGGAGTAGCAAGGCTTAGGATTTCAAATGATATTGAATTCGAAGAGGAGACTTTCATTGCTATGATGAATGAGGCTAGAGAGGTTTGTTACTCATATCATACATATATATTTTTCACTTTAAAGTCTCATGTTGCATAAAATAATAAAACGGTGTTCATCTATGTATAGAAACGAGAAAAACTAAAAGCGGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTCGATGCCATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTTATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACATTGCCATTGTTCCTGAGCCGCAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTCCAATTTCTCCAAGAGAAGAATGAGACTTGAGTCACAATTTAGTTTGTTTGGTTGTTTGTTGCATCGAGCTCGAAAGTTTGTAAGAGTTTGAATCTTTTGCTCCACGGTTTTCTAAGGTTGGCTGTTAATTATGGTATCTATATTATTCGATATTAGAGGAGTGAGTTTAATTAAAATCCAATTAATATAGTTTGTTCATAAATTTAAAACGTTCCTTCCGTTGAATCCATGTGACGTTGAGCATTATTTGGGATAAAAAATTTATGATGAGATACAATTTAGTTGATTCGTGAATCCAAACATAATTTAGAAGATAAGGC

mRNA sequence

ATAACATATATAAACGAGAGGGTGAGAATGAACAACAGTTGAGAGTCGCAGCCATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCGCCTCTTTCTCCCCCAACTTTATGGCCGCCGCCGGAGCTCGAATTCGGCCGGCGCGTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGATTTGCAAGTAAGGTGATCGGATCTCTGCCCGTGGTCGGACTGATCGCGAGAATTATGAGTGATGAAGGCGGCGTCGGCAGTGACCTTATTGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAGTCAGAGGAAATTTTGGAAGGAGTAGCAAGGCTTAGGATTTCAAATGATATTGAATTCGAAGAGGAGACTTTCATTGCTATGATGAATGAGGCTAGAGAGAAACGAGAAAAACTAAAAGCGGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTCGATGCCATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTTATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACATTGCCATTGTTCCTGAGCCGCAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTCCAATTTCTCCAAGAGAAGAATGAGACTTGAGTCACAATTTAGTTTGTTTGGTTGTTTGTTGCATCGAGCTCGAAAGTTTGTAAGAGTTTGAATCTTTTGCTCCACGGTTTTCTAAGGTTGGCTGTTAATTATGGTATCTATATTATTCGATATTAGAGGAGTGAGTTTAATTAAAATCCAATTAATATAGTTTGTTCATAAATTTAAAACGTTCCTTCCGTTGAATCCATGTGACGTTGAGCATTATTTGGGATAAAAAATTTATGATGAGATACAATTTAGTTGATTCGTGAATCCAAACATAATTTAGAAGATAAGGC

Coding sequence (CDS)

ATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCGCCTCTTTCTCCCCCAACTTTATGGCCGCCGCCGGAGCTCGAATTCGGCCGGCGCGTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGATTTGCAAGTAAGGTGATCGGATCTCTGCCCGTGGTCGGACTGATCGCGAGAATTATGAGTGATGAAGGCGGCGTCGGCAGTGACCTTATTGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAGTCAGAGGAAATTTTGGAAGGAGTAGCAAGGCTTAGGATTTCAAATGATATTGAATTCGAAGAGGAGACTTTCATTGCTATGATGAATGAGGCTAGAGAGAAACGAGAAAAACTAAAAGCGGCTGTTCCAAACATTCCGATGGAGGTTCGAGTCGAGAAAGCACTCGATGCCATTTATGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTTATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACATTGCCATTGTTCCTGAGCCGCAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTCCAATTTCTCCAAGAGAAGAATGAGACTTGA

Protein sequence

MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET
Homology
[Close]
BLAST of IVF0007372 vs. ExPASy Swiss-Prot
Match: Q9M3C6 (Photosystem I assembly factor PSA3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSA3 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-84
Identity = 173/276 (62.68%), Postives = 208/276 (75.36%), Query Frame = 0 

Query: 10  SSSLHSNPKSFF---LSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNSLSGFAS 69
           S+S H    SFF   L NP + S          R   +   A SI+AY+E PNS S FA+
Sbjct: 8   STSFHQISPSFFHLRLRNPSTTS--------SSRPKLDGGFALSIRAYIEKPNSFSTFAN 67

Query: 70  KVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGE 129
           KVIGSLPV+GL+ARI+SDEGGVG DL+DFAEFR+RVG KCT  +S+AFYEFQ+R+GKAGE
Sbjct: 68  KVIGSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKAGE 127

Query: 130 PLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKREKLKAA 189
           PLYVLLCCW+AAVGAGLLKSEEILEGV R+ ISND+EFEE+ FIA+M EAR++R KL   
Sbjct: 128 PLYVLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKLNID 187

Query: 190 VPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAI 249
            P IPME+RVEKAL+ IY C F R  IEE+DEKLL +ML AVFPSV + EI+RI+KEKA 
Sbjct: 188 APTIPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKEKAT 247

Query: 250 RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKN 283
           R+ EG +   V   + L KEAI  QMKDL+FLQ++N
Sbjct: 248 RVEEGGEEENVMAKR-LPKEAIQMQMKDLEFLQQQN 274

[Close]
BLAST of IVF0007372 vs. ExPASy Swiss-Prot
Match: B4FSG1 (Photosystem I assembly factor PSA3, chloroplastic OS=Zea mays OX=4577 GN=PSA3 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.0e-78
Identity = 151/248 (60.89%), Postives = 193/248 (77.82%), Query Frame = 0 

Query: 34  PQLYGRRRSSNSAGAFSIKAYME-NPNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDL 93
           P  +GR R        ++ AYME NPNS +  A +++G+LP+VGL+ARI++DEGGVG D+
Sbjct: 22  PAAHGRCRRRRYR---AVVAYMEPNPNSPAAIAGRLVGALPIVGLVARILNDEGGVGGDI 81

Query: 94  IDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEG 153
           IDFAEFRRRV KKCT+M+SKAFY+F +R+GK G+P YVLLCCWLAA+GAGLLK+EEILEG
Sbjct: 82  IDFAEFRRRVSKKCTVMDSKAFYDFNQRRGKPGDPFYVLLCCWLAAIGAGLLKTEEILEG 141

Query: 154 VARLRISNDIEFEEETFIAMMNEAREKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDP 213
           VARLRISNDIEFEEETFI MM  A+EKR KLKA  P IPME R EKAL+AIYVC FG+D 
Sbjct: 142 VARLRISNDIEFEEETFIDMMRAAKEKRAKLKAPAPQIPMETRAEKALEAIYVCCFGQDM 201

Query: 214 IEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQM 273
           +E++DEKLL  +L+AVFPSVG   ++R+V   A ++A G+      + + +SKE    Q+
Sbjct: 202 VEDEDEKLLRAILNAVFPSVGRAAVERMVASMAKQVASGER---KRDGRTVSKEVQQRQL 261

Query: 274 KDLQFLQE 281
           KDL+FL++
Sbjct: 262 KDLEFLKQ 263

[Close]
BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A5D3CQC9 (Putative ubiquinone biosynthesis UbiB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1119G00270 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.8e-149
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]
BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A1S3B876 (uncharacterized protein LOC103487086 OS=Cucumis melo OX=3656 GN=LOC103487086 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.8e-149
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]
BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A0A0LCC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836490 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.6e-142
Identity = 269/284 (94.72%), Postives = 278/284 (97.89%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPK FFLSNPISPS LFL +LYGRRR+ NSAGAFSIKAYME+PNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKFFFLSNPISPSPLFLRKLYGRRRNPNSAGAFSIKAYMESPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARI+SDEGGVG+D+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGTDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           +KEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE NET
Sbjct: 241 LKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQENNET 284

[Close]
BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A6J1EQR9 (photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435039 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.3e-125
Identity = 243/287 (84.67%), Postives = 264/287 (91.99%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLY---GRRRSSNSAGAFSIKAYMEN 60
           M+VTSTSTT SS HSNPKSFFL + ISP +L   Q +   GRRR   S G  S++AYMEN
Sbjct: 1   MAVTSTSTT-SSFHSNPKSFFLYSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETF+AMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFL+E +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLRENSET 286

[Close]
BLAST of IVF0007372 vs. ExPASy TrEMBL
Match: A0A6J1JJA4 (photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486319 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.1e-123
Identity = 240/287 (83.62%), Postives = 261/287 (90.94%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLY---GRRRSSNSAGAFSIKAYMEN 60
           M+VTSTSTT SS HSNPKSFFLS+ ISP +L   Q +   GRRR   S G  S++AYMEN
Sbjct: 1   MAVTSTSTT-SSFHSNPKSFFLSSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEI EGVARLRIS+DIEFEEETF+AMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEIFEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AV  IPMEVRVEKALDAIYVCSFGRDPIEE DEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVSKIPMEVRVEKALDAIYVCSFGRDPIEEHDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           QR+VKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE + T
Sbjct: 241 QRMVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSGT 286

[Close]
BLAST of IVF0007372 vs. NCBI nr
Match: XP_008443515.1 (PREDICTED: uncharacterized protein LOC103487086 [Cucumis melo] >KAA0053674.1 putative ubiquinone biosynthesis UbiB [Cucumis melo var. makuwa] >TYK14001.1 putative ubiquinone biosynthesis UbiB [Cucumis melo var. makuwa])

HSP 1 Score: 537 bits (1384), Expect = 4.41e-192
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]
BLAST of IVF0007372 vs. NCBI nr
Match: XP_004141087.1 (photosystem I assembly factor PSA3, chloroplastic [Cucumis sativus] >KGN59665.1 hypothetical protein Csa_000816 [Cucumis sativus])

HSP 1 Score: 513 bits (1321), Expect = 1.76e-182
Identity = 269/284 (94.72%), Postives = 278/284 (97.89%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPK FFLSNPISPS LFL +LYGRRR+ NSAGAFSIKAYME+PNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKFFFLSNPISPSPLFLRKLYGRRRNPNSAGAFSIKAYMESPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARI+SDEGGVG+D+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGTDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           +KEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE NET
Sbjct: 241 LKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQENNET 284

[Close]
BLAST of IVF0007372 vs. NCBI nr
Match: XP_038905081.1 (photosystem I assembly factor PSA3, chloroplastic [Benincasa hispida])

HSP 1 Score: 504 bits (1297), Expect = 8.02e-179
Identity = 266/284 (93.66%), Postives = 273/284 (96.13%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60
           MSVTSTS+TSSSLHSN KSFFLS PISPSRLFL Q+YGRRR SNSAG  S+KAYMENPNS
Sbjct: 1   MSVTSTSSTSSSLHSNLKSFFLSKPISPSRLFLRQIYGRRRQSNSAGVLSVKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLK AVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVF SV E EIQRI
Sbjct: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVRETEIQRI 240

Query: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEK ET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 284

[Close]
BLAST of IVF0007372 vs. NCBI nr
Match: KAG7022731.1 (hypothetical protein SDJN02_16466 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 461 bits (1187), Expect = 4.94e-162
Identity = 244/287 (85.02%), Postives = 265/287 (92.33%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYG---RRRSSNSAGAFSIKAYMEN 60
           M+VTSTSTTSS  HSNPKSFFLS+ ISP +L   Q +G   RRR   S G  S++AYMEN
Sbjct: 1   MAVTSTSTTSS-FHSNPKSFFLSSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETF+AMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVRVEKALDAIYVCSFGRDPIEE+DEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEEDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSET 286

[Close]
BLAST of IVF0007372 vs. NCBI nr
Match: KAG6588962.1 (Photosystem I assembly factor PSA3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 461 bits (1187), Expect = 4.94e-162
Identity = 244/287 (85.02%), Postives = 264/287 (91.99%), Query Frame = 0 

Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYG---RRRSSNSAGAFSIKAYMEN 60
           M+VTSTSTTSS  HSNPKSFFLS+ ISP +    Q +G   RRR   S G  S++AYMEN
Sbjct: 1   MAVTSTSTTSS-FHSNPKSFFLSSLISPPKFLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETF+AMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           QRIVKEKA+RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQE +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSET 286

[Close]
BLAST of IVF0007372 vs. TAIR 10
Match: AT3G55250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 314.7 bits (805), Expect = 7.6e-86
Identity = 173/276 (62.68%), Postives = 208/276 (75.36%), Query Frame = 0 

Query: 10  SSSLHSNPKSFF---LSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNSLSGFAS 69
           S+S H    SFF   L NP + S          R   +   A SI+AY+E PNS S FA+
Sbjct: 8   STSFHQISPSFFHLRLRNPSTTS--------SSRPKLDGGFALSIRAYIEKPNSFSTFAN 67

Query: 70  KVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGE 129
           KVIGSLPV+GL+ARI+SDEGGVG DL+DFAEFR+RVG KCT  +S+AFYEFQ+R+GKAGE
Sbjct: 68  KVIGSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKAGE 127

Query: 130 PLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKREKLKAA 189
           PLYVLLCCW+AAVGAGLLKSEEILEGV R+ ISND+EFEE+ FIA+M EAR++R KL   
Sbjct: 128 PLYVLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKLNID 187

Query: 190 VPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAI 249
            P IPME+RVEKAL+ IY C F R  IEE+DEKLL +ML AVFPSV + EI+RI+KEKA 
Sbjct: 188 APTIPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKEKAT 247

Query: 250 RIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKN 283
           R+ EG +   V   + L KEAI  QMKDL+FLQ++N
Sbjct: 248 RVEEGGEEENVMAKR-LPKEAIQMQMKDLEFLQQQN 274

The following BLAST results are available for this feature:
BLAST of IVF0007372 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3C61.1e-8462.68Photosystem I assembly factor PSA3, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
B4FSG12.0e-7860.89Photosystem I assembly factor PSA3, chloroplastic OS=Zea mays OX=4577 GN=PSA3 PE... [more]
BLAST of IVF0007372 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CQC93.8e-149100.00Putative ubiquinone biosynthesis UbiB OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3B8763.8e-149100.00uncharacterized protein LOC103487086 OS=Cucumis melo OX=3656 GN=LOC103487086 PE=... [more]
A0A0A0LCC27.6e-14294.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836490 PE=4 SV=1[more]
A0A6J1EQR91.3e-12584.67photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1JJA42.1e-12383.62photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita maxima OX=3661 GN... [more]
BLAST of IVF0007372 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443515.14.41e-192100.00PREDICTED: uncharacterized protein LOC103487086 [Cucumis melo] >KAA0053674.1 put... [more]
XP_004141087.11.76e-18294.72photosystem I assembly factor PSA3, chloroplastic [Cucumis sativus] >KGN59665.1 ... [more]
XP_038905081.18.02e-17993.66photosystem I assembly factor PSA3, chloroplastic [Benincasa hispida][more]
KAG7022731.14.94e-16285.02hypothetical protein SDJN02_16466 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6588962.14.94e-16285.02Photosystem I assembly factor PSA3, chloroplastic, partial [Cucurbita argyrosper... [more]
BLAST of IVF0007372 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G55250.17.6e-8662.68unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037736Photosystem I assembly factor PSA3PANTHERPTHR36770PHOTOSYSTEM I ASSEMBLY FACTOR PSA3, CHLOROPLASTICcoord: 40..283

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007372.1IVF0007372.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048564 photosystem I assembly
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0098572 stromal side of plastid thylakoid membrane