IVF0007248 (gene) Melon (IVF77) v1

Overview


Name	IVF0007248
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	trigger factor-like isoform X3
Location	chr11: 30025479 .. 30028460 (+)
RNA-Seq Expression	IVF0007248
Synteny	IVF0007248

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAAAACCACTGTTTTGAAAGAAACGGAGGTTAAGTTTGGGTGACAGTGGATAAGAGCGACGAGAGAGAGAGAGAGAGAGAGACAATGCAAATTGCAGCTGCCAACTTCTTTCTTTCTGCAAACCCCAAGGTAATCTATCCCTTTCTCTCCGCCTCAATTTGTGTTTCTCTTACAATTCCCGATCAACTTTCAGTGAATCATAAATCTATGGAATTTTCTAGTCTGTTATTGCTTTATGTTAACTGAGCAGTGAAGAACAGACGTAACAAGCAATAACACTGAATATTGTGTATTGGGTCAGAACTATTTGTGCTAACATTGCTGTTTATTCATATAAAGTGCTAACATAGCTCACTACAATTATGGTATCTCTGTTTATATTCATCTGAAGTTTATTCATTCTTATTCATTCAACCTTCTTTCTTAATTGTATGTAGGCTGTATATCATAAGCAGACAACAGATTACTTTACTCCAAACCTCACTTGCACAAGTGTATCTTTTCCCAGTCAAATTAAATATGGTAGCAGCAAAATTTCCCTGAGGTAATTTCATATCAATTGGACCATGTTTCTAATGATAAGCCAAACTATGAATGATGGTGCCCCAAATTAGAAAGACTTCAGCATCTAATTGATTTACTTCGGACTTTTCTTTCATATGATGAAGCTGATTGGTTAACCATCGAAGTTTACCAAACATATAAACTCATAAGAGACTAGCTTTACTAGCAAATTTTGTGCACGACAGTCTAAATGCTCATGGTCTGCTCCATTTTGACATTTTCCGAATTACATGCTTCACATCCAGTCCTGTTATTTAGTCACTCGAAACAGGAATCACCGATTCATCATCAGGGCGGCCAATACATTTTTCGATAGAATTTTATGTAGCCATAATCATTTGTATGGTTTTGAAAGACAAGTAGTTGTGTATGTTCCTAATTATAAAAGTTATATGTTCACTCTGCAGTAAAAATAACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGGTTACAATACATTTCCTTCTGTTCCTAGAGCAATTTCAACAATTTCCATTTGTATAAGTACTATGTTGGATAAAAATTCTAATTTTATTCTGAGCAGAAAATGCGAGTGTTTCATCTTCTCAGTTTGAAGACTTCTCCGTCACTAATGTTACCAATACAACTGAGAATAAAGAACTAAAGGTATGAAACATGGTGAGTTTTATTCTCAGAATCCTTGTGTCTGTAACCCTCACATTTTTATTCTTTGTTTAAATCCTATTTAGAATTTAGAGTTTTCAGTTATTTTGTTTTTGACCCTAAACTTTCAAATATAAGTTTTAGTTACTTCACCTTAATGCATTCTATTTAATCCCTAAGAAATATTCTAGTCCTTGCCATTAATACATCAGTCATTTAAAAAAAAAAACTACTTCACTTTGAAATCCAAAATTGAACCTACCAGTGGCCAATGTACCTATCCACCACAGAAATCAGTCATCTCGTAAATAATTAAGACGAAGAGATATACCTATTTGGGTTTCTGTTAAAAATTTATGAAAAAACTAACGTTCACACCTGAAATGATTCTTGTGGCAAAAATTTAGGGATTGAAATAGAATATTTGAATTGTATGGGGACCAAAATAAAACGAGTATGAAAATACAGGTTTGAAGTTGGATTTAAACCCTTGTTATATGTACAACAATTTAATGCAAATTTAGGAACTCTTATTATTACCATAACGTTTCATTTTTTGGAGTTGGCAACCAGATTCGTGTTGAGGTGTCAGGAACCAAAACTCGAGCAATTTTCAACGTCGTGTTTGACAGAATGGTTGCTGAAGCCCAACCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGTAATATCCAGAGGCATGTTTCTTATTTGAAGTGCTCGTTGTCTTCATTTTCATGTTCTCAAAACCATCATAACACTGTCTGGCACCTTTAATTTTCTGGCGAGCATTTGTAAACAATCTTTTTTTGGGGGATATCTTCATCTTAGAGAGATGAAATTGTTACTAAACGACCTCTAAACAATCAGAAAATTGATTTGCTTAATTTTCTTTTTTCTTTCCTCAATTCATTTCATTGGACTTGAAACATGCTGCTCTTCATTGGATGTTAGGAAAGACGCCAAATGTAAGTTTTCTTTACTTTCAATCTCTTGGTTTTTAGGAAGTAACTACTGACAATCTTAATTGGGAAGACATGAGAAGTTACTGATAAGTTCATCATTTGTTCTCGACAGATACCCCGAGACATTCTGTTAGAGATACTGGGACCTTCTAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGTAAAGATATTATTTGCATTTTCATGTTCTGATTTTGATAGCATGACGCGCTGAAAGTTTTCTGTTGGTACGAATAGATTAGAAATAACATTTCAGCATGTTGCCGCATTCCATATCTTAGTGTTCTTCTCTAATTTCCTTTGCTTTCCTGGAAATTTTTACCATTGTAGCAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGATCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAAAAGTTCTTCTTTGATGCCATTATTCAGCTCAAGGAATCAAACTGAACTACTAAATTAACATACATCTTGAAGACCAACTTTTTGTTAACATACATTCACTCAAACTCGATGCAATTTTGCTAGGAATCTCCAAATTAGGTTGTCCATTATTTGTTTGTTTTGGCAGAGGGTTATCATCAACTCAACCAAAATGATAGCATGTTGGACCTATAGTATTTGTACTTTCAATTTTTCAATCATAGACCTATAGTAACCATGTTTAGGTACTTGTAAACATAAACAATCGATAGAAACAAGAAAATGTGGGATCCATTTTCTCATGCTATGTGGAATTCTCAATCTCATTCTCGCTGATAGGGAC

mRNA sequence

CCGAAAACCACTGTTTTGAAAGAAACGGAGGTTAAGTTTGGGTGACAGTGGATAAGAGCGACGAGAGAGAGAGAGAGAGAGAGACAATGCAAATTGCAGCTGCCAACTTCTTTCTTTCTGCAAACCCCAAGGCTGTATATCATAAGCAGACAACAGATTACTTTACTCCAAACCTCACTTGCACAAGTGTATCTTTTCCCAGTCAAATTAAATATGGTAGCAGCAAAATTTCCCTGAGTAAAAATAACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGAAAATGCGAGTGTTTCATCTTCTCAGTTTGAAGACTTCTCCGTCACTAATGTTACCAATACAACTGAGAATAAAGAACTAAAGATTCGTGTTGAGGTGTCAGGAACCAAAACTCGAGCAATTTTCAACGTCGTGTTTGACAGAATGGTTGCTGAAGCCCAACCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGAAAGACGCCAAATATACCCCGAGACATTCTGTTAGAGATACTGGGACCTTCTAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGATCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAAAAGTTCTTCTTTGATGCCATTATTCAGCTCAAGGAATCAAACTGAACTACTAAATTAACATACATCTTGAAGACCAACTTTTTGTTAACATACATTCACTCAAACTCGATGCAATTTTGCTAGGAATCTCCAAATTAGGTTGTCCATTATTTGTTTGTTTTGGCAGAGGGTTATCATCAACTCAACCAAAATGATAGCATGTTGGACCTATAGTATTTGTACTTTCAATTTTTCAATCATAGACCTATAGTAACCATGTTTAGGTACTTGTAAACATAAACAATCGATAGAAACAAGAAAATGTGGGATCCATTTTCTCATGCTATGTGGAATTCTCAATCTCATTCTCGCTGATAGGGAC

Coding sequence (CDS)

ATGCAAATTGCAGCTGCCAACTTCTTTCTTTCTGCAAACCCCAAGGCTGTATATCATAAGCAGACAACAGATTACTTTACTCCAAACCTCACTTGCACAAGTGTATCTTTTCCCAGTCAAATTAAATATGGTAGCAGCAAAATTTCCCTGAGTAAAAATAACAGATATCTTCCAGCTGCTTGTGCTGTGTTATCAGAAAATGCGAGTGTTTCATCTTCTCAGTTTGAAGACTTCTCCGTCACTAATGTTACCAATACAACTGAGAATAAAGAACTAAAGATTCGTGTTGAGGTGTCAGGAACCAAAACTCGAGCAATTTTCAACGTCGTGTTTGACAGAATGGTTGCTGAAGCCCAACCTATTCCAGGTTTTAGAAGAGTGAAAGGAGGAAAGACGCCAAATATACCCCGAGACATTCTGTTAGAGATACTGGGACCTTCTAAGGTGTACAAACAAGTTATTAAGGAAGTTATCAACTCTACTGTTGCTGCATATGTGGAAAAGGAAGCTCTAAAAGTGGGTAAAGACTTGAGAATAGATCAAAGCTATGAGGATCTTGAAGACCAATTTGAACCAGATGAAAAGTTCTTCTTTGATGCCATTATTCAGCTCAAGGAATCAAACTGA

Protein sequence

MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAACAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN

Homology

[Close]

BLAST of IVF0007248 vs. ExPASy Swiss-Prot
Match: Q8DLI3 (Trigger factor OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tig PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-06
Identity = 35/122 (28.69%), Postives = 61/122 (50.00%), Query Frame = 0


Query: 84  TNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTPNIPRDILLEI 143
           T    N +L   +EVSGT ++ ++N V + ++   Q +PGFR+ K       PR ++L+ 
Sbjct: 3   TEPRSNSQLLATIEVSGTHSQQVYNQVVNDLLRHTQ-VPGFRKGKA------PRQLVLQQ 62

Query: 144 LGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLEDQFEPDEKFFFDAIIQ 203
           LG  ++    ++++I   V   VEK  +    +L +     +L DQF P E F F     
Sbjct: 63  LGRERLRYLAMEKLIEDAVKTAVEKNNIPYLGNLELAGGITELLDQFHPGENFSFSVTFD 117

Query: 204 LK 206
           ++
Sbjct: 123 VE 117

[Close]

BLAST of IVF0007248 vs. ExPASy Swiss-Prot
Match: Q7NDP0 (Trigger factor OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=tig PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.2e-05
Identity = 29/115 (25.22%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 91  ELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVY 150
           ++ + VEV G K++  +  +    +  A+ IPGFR  K       PR ++L+  G  ++ 
Sbjct: 12  QMGLNVEVEGEKSKQAYEKLVRDTMRTAR-IPGFRPGKA------PRQLVLQFYGKERLR 71

Query: 151 KQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLEDQFEPDEKFFFDAIIQLK 206
            Q ++ +I+S++   +E+E++    +L++  S+E+L  +++P E   F A + ++
Sbjct: 72  AQALENLIDSSLKEAIEQESIASLGNLQLRDSFEELLGRYQPGEPLSFKAAVDVQ 119

[Close]

BLAST of IVF0007248 vs. ExPASy Swiss-Prot
Match: B1XL18 (Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=tig PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.0e-05
Identity = 27/114 (23.68%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 91  ELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVY 150
           ++ + +EV    T+  ++    R +A    +PGFR+ K      +P+ IL++ LGP+++ 
Sbjct: 12  QVGLEIEVPADVTQKAYDDTV-RKLARTVNLPGFRKGK------VPKQILIQRLGPNRIK 71

Query: 151 KQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLEDQFEPDEKFFFDAIIQL 205
             V++++I+ ++ A + +E ++   + ++  S++DL   ++P E   F A + +
Sbjct: 72  ASVLEDLIDDSLKAAIAQENIEALGNFQLKSSFDDLISAYKPGEASSFKAAVDV 118

[Close]

BLAST of IVF0007248 vs. ExPASy Swiss-Prot
Match: B2IT89 (Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=tig PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-04
Identity = 30/115 (26.09%), Postives = 61/115 (53.04%), Query Frame = 0


Query: 91  ELKIRVEVSGTKTRAIFNVVFDRMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVY 150
           ++ + +E++   T+  +  V   + + A  IPGFRR K      +PR ILL+ LG +++ 
Sbjct: 12  QIGLEIEITPEITKQTYEQVIKNLASTAN-IPGFRRGK------VPRPILLQRLGTTRIK 71

Query: 151 KQVIKEVINSTVAAYVEKEALKVGKDLRIDQSYEDLEDQFEPDEKFFFDAIIQLK 206
              ++E+I   +   V++EA+      ++  S+EDL + +EP +     A + ++
Sbjct: 72  AAALEELIQDGIEQAVKQEAIPAIGQPQLRSSFEDLINNYEPGKPLTILAAVDVE 119

[Close]

BLAST of IVF0007248 vs. ExPASy TrEMBL
Match: A0A1S3CB34 (trigger factor-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.2e-108
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKESN 209
           QSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 QSYEDLEDQFEPDEKFFFDAIIQLKESN 208

[Close]

BLAST of IVF0007248 vs. ExPASy TrEMBL
Match: A0A5D3DLR6 (Trigger factor-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001220 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGKDLRI 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGKDLRI
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGKDLRI 180

Query: 181 DQSYEDLEDQFEPDEKFFFDAIIQLKESN 209
           DQSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 DQSYEDLEDQFEPDEKFFFDAIIQLKESN 209

[Close]

BLAST of IVF0007248 vs. ExPASy TrEMBL
Match: A0A1S3CCS7 (trigger factor-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGKDLRI 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGKDLRI
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGKDLRI 180

Query: 181 DQSYEDLEDQFEPDEKFFFDAIIQLKESN 209
           DQSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 DQSYEDLEDQFEPDEKFFFDAIIQLKESN 209

[Close]

BLAST of IVF0007248 vs. ExPASy TrEMBL
Match: A0A1S3CC05 (trigger factor-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.9e-106
Identity = 208/212 (98.11%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGG----KTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKD 180
           IPGFRRVKGG    KTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKD
Sbjct: 121 IPGFRRVKGGNIQRKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKD 180

Query: 181 LRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 209
           LRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 LRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 212

[Close]

BLAST of IVF0007248 vs. ExPASy TrEMBL
Match: A0A1S3CBJ8 (trigger factor-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.1e-105
Identity = 208/213 (97.65%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGG----KTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGK 180
           IPGFRRVKGG    KTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGK
Sbjct: 121 IPGFRRVKGGNIQRKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGK 180

Query: 181 DLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 209
           DLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 DLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 213

[Close]

BLAST of IVF0007248 vs. NCBI nr
Match: XP_008460019.1 (PREDICTED: trigger factor-like isoform X4 [Cucumis melo])

HSP 1 Score: 399 bits (1024), Expect = 9.71e-140
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKESN 208
           QSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 QSYEDLEDQFEPDEKFFFDAIIQLKESN 208

[Close]

BLAST of IVF0007248 vs. NCBI nr
Match: XP_008460018.1 (PREDICTED: trigger factor-like isoform X3 [Cucumis melo] >TYK24577.1 trigger factor-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 394 bits (1012), Expect = 6.80e-138
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGKDLRI 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGKDLRI
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGKDLRI 180

Query: 181 DQSYEDLEDQFEPDEKFFFDAIIQLKESN 208
           DQSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 DQSYEDLEDQFEPDEKFFFDAIIQLKESN 209

[Close]

BLAST of IVF0007248 vs. NCBI nr
Match: XP_008460017.1 (PREDICTED: trigger factor-like isoform X2 [Cucumis melo])

HSP 1 Score: 393 bits (1009), Expect = 2.17e-137
Identity = 208/212 (98.11%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGG----KTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKD 180
           IPGFRRVKGG    KTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKD
Sbjct: 121 IPGFRRVKGGNIQRKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKD 180

Query: 181 LRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 208
           LRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 LRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 212

[Close]

BLAST of IVF0007248 vs. NCBI nr
Match: XP_008460016.1 (PREDICTED: trigger factor-like isoform X1 [Cucumis melo])

HSP 1 Score: 388 bits (997), Expect = 1.52e-135
Identity = 208/213 (97.65%), Postives = 208/213 (97.65%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGG----KTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK-EALKVGK 180
           IPGFRRVKGG    KTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEK EALKVGK
Sbjct: 121 IPGFRRVKGGNIQRKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKQEALKVGK 180

Query: 181 DLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 208
           DLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN
Sbjct: 181 DLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 213

[Close]

BLAST of IVF0007248 vs. NCBI nr
Match: XP_004140596.1 (uncharacterized protein LOC101211587 isoform X2 [Cucumis sativus] >KGN46334.1 hypothetical protein Csa_005501 [Cucumis sativus])

HSP 1 Score: 382 bits (981), Expect = 3.49e-133
Identity = 198/208 (95.19%), Postives = 200/208 (96.15%), Query Frame = 0


Query: 1   MQIAAANFFLSANPKAVYHKQTTDYFTPNLTCTSVSFPSQIKYGSSKISLSKNNRYLPAA 60
           MQIAAANFFLS NPKA+YHKQTTDYFTPNLTC  VSFPSQI+YGS KISLSKNNRYLPAA
Sbjct: 1   MQIAAANFFLSVNPKAIYHKQTTDYFTPNLTCIGVSFPSQIRYGSRKISLSKNNRYLPAA 60

Query: 61  CAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAIFNVVFDRMVAEAQP 120
           CAVLSEN SVSSSQFEDFSVTNVTNT ENKELKIRVEVSG KTRAIFNVVFDRMVAEAQP
Sbjct: 61  CAVLSENVSVSSSQFEDFSVTNVTNTKENKELKIRVEVSGAKTRAIFNVVFDRMVAEAQP 120

Query: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID 180
           IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID
Sbjct: 121 IPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYVEKEALKVGKDLRID 180

Query: 181 QSYEDLEDQFEPDEKFFFDAIIQLKESN 208
           QSYEDLEDQFEPDE FFFDAIIQLKESN
Sbjct: 181 QSYEDLEDQFEPDENFFFDAIIQLKESN 208

[Close]

BLAST of IVF0007248 vs. TAIR 10
Match: AT2G30695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 172.2 bits (435), Expect = 4.5e-43
Identity = 94/162 (58.02%), Postives = 120/162 (74.07%), Query Frame = 0


Query: 47  KISLSKNNRYLPAACAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAI 106
           K+     NR   A CA  S+    +SS+ E   +T V   T N E+K+ V+VSG KT+ +
Sbjct: 41  KLCTRATNRQFVAVCAAPSD--VETSSKDESVLITKVETETSN-EVKVHVQVSGEKTQTV 100

Query: 107 FNVVFDRMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYV 166
           FN VF++MVA AQPIPGFRRVKGGKTPNIP+D+LLEILG SKVYKQVIK++INS +  YV
Sbjct: 101 FNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYV 160

Query: 167 EKEALKVGKDLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 209
           ++E LKVGK+L + QSYEDLE+ FEP E F FDA I+L+E++
Sbjct: 161 KQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

[Close]

BLAST of IVF0007248 vs. TAIR 10
Match: AT2G30695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 172.2 bits (435), Expect = 4.5e-43
Identity = 94/162 (58.02%), Postives = 120/162 (74.07%), Query Frame = 0


Query: 47  KISLSKNNRYLPAACAVLSENASVSSSQFEDFSVTNVTNTTENKELKIRVEVSGTKTRAI 106
           K+     NR   A CA  S+    +SS+ E   +T V   T N E+K+ V+VSG KT+ +
Sbjct: 41  KLCTRATNRQFVAVCAAPSD--VETSSKDESVLITKVETETSN-EVKVHVQVSGEKTQTV 100

Query: 107 FNVVFDRMVAEAQPIPGFRRVKGGKTPNIPRDILLEILGPSKVYKQVIKEVINSTVAAYV 166
           FN VF++MVA AQPIPGFRRVKGGKTPNIP+D+LLEILG SKVYKQVIK++INS +  YV
Sbjct: 101 FNHVFEKMVAAAQPIPGFRRVKGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYV 160

Query: 167 EKEALKVGKDLRIDQSYEDLEDQFEPDEKFFFDAIIQLKESN 209
           ++E LKVGK+L + QSYEDLE+ FEP E F FDA I+L+E++
Sbjct: 161 KQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKLQEAS 199

The following BLAST results are available for this feature:

BLAST of IVF0007248 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8DLI3	1.9e-06	28.69	Trigger factor OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tig P...	[more]
Q7NDP0	6.2e-05	25.22	Trigger factor OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221...	[more]
B1XL18	8.0e-05	23.68	Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=320...	[more]
B2IT89	1.0e-04	26.09	Trigger factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN...	[more]

BLAST of IVF0007248 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CB34	5.2e-108	100.00	trigger factor-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1	[more]
A0A5D3DLR6	1.3e-106	99.52	Trigger factor-like isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CCS7	1.3e-106	99.52	trigger factor-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1	[more]
A0A1S3CC05	2.9e-106	98.11	trigger factor-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1	[more]
A0A1S3CBJ8	7.1e-105	97.65	trigger factor-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498958 PE=4 SV=1	[more]

BLAST of IVF0007248 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460019.1	9.71e-140	100.00	PREDICTED: trigger factor-like isoform X4 [Cucumis melo]	[more]
XP_008460018.1	6.80e-138	99.52	PREDICTED: trigger factor-like isoform X3 [Cucumis melo] >TYK24577.1 trigger fac...	[more]
XP_008460017.1	2.17e-137	98.11	PREDICTED: trigger factor-like isoform X2 [Cucumis melo]	[more]
XP_008460016.1	1.52e-135	97.65	PREDICTED: trigger factor-like isoform X1 [Cucumis melo]	[more]
XP_004140596.1	3.49e-133	95.19	uncharacterized protein LOC101211587 isoform X2 [Cucumis sativus] >KGN46334.1 hy...	[more]

BLAST of IVF0007248 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30695.1	4.5e-43	58.02	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]
AT2G30695.2	4.5e-43	58.02	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036611	Trigger factor ribosome-binding domain superfamily	GENE3D	3.30.70.1050		coord: 82..205 e-value: 4.3E-16 score: 61.1
IPR036611	Trigger factor ribosome-binding domain superfamily	SUPERFAMILY	102735	Trigger factor ribosome-binding domain	coord: 85..203
IPR008881	Trigger factor, ribosome-binding, bacterial	PFAM	PF05697	Trigger_N	coord: 84..202 e-value: 6.4E-9 score: 36.2
None	No IPR available	PANTHER	PTHR30560:SF5	OS09G0515400 PROTEIN	coord: 1..207
IPR005215	Trigger factor	PANTHER	PTHR30560	TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE	coord: 1..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007248.1	IVF0007248.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0051083	'de novo' cotranslational protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0015031	protein transport
biological_process	GO:0043335	protein unfolding
biological_process	GO:0006457	protein folding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0043022	ribosome binding