IVF0007173 (gene) Melon (IVF77) v1

Overview
NameIVF0007173
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 22974648 .. 22974830 (+)
RNA-Seq ExpressionIVF0007173
SyntenyIVF0007173
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAAATCCAATCGCTCCTAGTAGAAATTAGAGTGCTGACGGCAAAGAAGAATGAATATGCCCGATCGTTCGTACTAAGAGTTGGATCCGATGGCAAAAGCCCAATTGCCCCTAATAGAAATTGGATCGCTAACGGCGAAGTAGAACAAATATGCCTGATTGTTCCTACTAGGAGTTAA

mRNA sequence

ATGGCAAAAATCCAATCGCTCCTAGTAGAAATTAGAGTGCTGACGGCAAAGAAGAATGAATATGCCCGATCGTTCGTACTAAGAGTTGGATCCGATGGCAAAAGCCCAATTGCCCCTAATAGAAATTGGATCGCTAACGGCGAAGTAGAACAAATATGCCTGATTGTTCCTACTAGGAGTTAA

Coding sequence (CDS)

ATGGCAAAAATCCAATCGCTCCTAGTAGAAATTAGAGTGCTGACGGCAAAGAAGAATGAATATGCCCGATCGTTCGTACTAAGAGTTGGATCCGATGGCAAAAGCCCAATTGCCCCTAATAGAAATTGGATCGCTAACGGCGAAGTAGAACAAATATGCCTGATTGTTCCTACTAGGAGTTAA

Protein sequence

MAKIQSLLVEIRVLTAKKNEYARSFVLRVGSDGKSPIAPNRNWIANGEVEQICLIVPTRS
Homology
BLAST of IVF0007173 vs. ExPASy TrEMBL
Match: A0A5A7UI85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00110 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.4e-05
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0

Query: 2   AKIQSLLVEIRVLTAKKNEYARSFVLRVGSDGKSPIAPNRNWIANGEVE 51
           AK++SL VEI   TAK+NE A+S +L VG DGKS IAP+RN I +GE E
Sbjct: 117 AKVRSLPVEIGSQTAKQNEDAQSLLLGVGFDGKSSIAPSRNQITDGEAE 165

BLAST of IVF0007173 vs. NCBI nr
Match: KAA0055593.1 (uncharacterized protein E6C27_scaffold222G00750 [Cucumis melo var. makuwa] >TYK01332.1 uncharacterized protein E5676_scaffold29G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 1.78e-07
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0

Query: 2   AKIQSLLVEIRVLTAKKNEYARSFVLRVGSDGKSPIAPNRNWIANGEVE 50
           AK++SL VEI   TAK+NE A+S +L VG DGKS IAP+RN I +GE E
Sbjct: 117 AKVRSLPVEIGSQTAKQNEDAQSLLLGVGFDGKSSIAPSRNQITDGEAE 165

BLAST of IVF0007173 vs. NCBI nr
Match: KAA0065775.1 (hypothetical protein E6C27_scaffold37G00680 [Cucumis melo var. makuwa] >TYJ96515.1 hypothetical protein E5676_scaffold546G001640 [Cucumis melo var. makuwa])

HSP 1 Score: 47.4 bits (111), Expect = 1.46e-04
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0

Query: 3  KIQSLLVEIRVLTAKKNEYARSFVLRVGSDGKSPIAPNRNWIANGE 48
          K+Q  LVEI  LTAK+NE  RSF+  VG D KS I+ NRN IA G+
Sbjct: 52 KVQLSLVEIGSLTAKQNEDIRSFLPGVGFDDKSSISHNRNQIAKGK 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UI855.4e-0561.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0055593.11.78e-0761.22uncharacterized protein E6C27_scaffold222G00750 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0065775.11.46e-0458.70hypothetical protein E6C27_scaffold37G00680 [Cucumis melo var. makuwa] >TYJ96515... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0007173.1IVF0007173.1mRNA