IVF0007097 (gene) Melon (IVF77) v1

Overview


Name	IVF0007097
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	zinc finger protein 593
Location	chr08: 8269433 .. 8271223 (+)
RNA-Seq Expression	IVF0007097
Synteny	IVF0007097

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGTGGTACAACCACCAATAAACAAACCCTAATTTTACTCCGATTTTGCAATACTTGAGCTCTAGATTGAAGAACATGGGAGGAAAATGTCCTCACAGAAGCGTAAAAAAGCGGAGATACTCACACAAGACCGCTCGGCGAACGAAATTTCTTGTCAAAGATATCCTTTTCTTACACTTCATTGTTCTATTTCGTTTTTCGTTTTCGTTATGTTTGTGGATTTTCCTTAATTTGATGAATCGATGAATCACGGGATGATATGGTTTACAATGAATTAGCGAAACCTGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGAGTAAGTTTTTTCATTTGCTACTCTTTTTTATTATTATTATTATTATTATTATTTCTTTACTCGAAATTTCTGTAGAAAATCGTTTCTCTCATTGTAGAGAATTCATCAATTTTAATGGTTAGGGCTGAATATTTTATGAAGTATTATGATTTGGTTATCTTGATTGAAATTTGCAAGTACAGATTTGAAGTTTAGAGTTTTTAATCGATCAATTAATGCTGTGGTTTACTCATCTTTAGGGCTGAATATTTTTTTGATGTGTTATCTGAGGCTGAGATGTTTTATGAAGTATTATGTACGATTTTAAAGTTTACAATTTACAATCGATTAATGGTATGGTTTCAGCCGATACTTTGCGAATGTGTCTGTGAGGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAGGTGAGCCTAGCCAATTTTTACCTCCCATCATTTTCTGGTCATCCTTTGCGCATTTCGTTCATATATTTAAAAGAAATCCATCTCGTATTCTCCTTGGAGGCATGATTAAATGTTGAGAACGCTCACTTTTACTAACCCTATCAGCCTTTGTTTCTTATATTACGTTTTTAGTTTGCCTAATTTGGTTGGTGTTTTGATTAGGTTGTTGTGTGAAATTATGAACTTGGAATTGGAATATTAAACTTGGTACTGGAGTCTGTCGTAATGCTGACTGAGTTTAAATTTCTTAAGTTCCTTCACCTGGTCTCAGTCTTAATTTGTTATAAATACGGCATAGGTGAAAACAAATTTGGAACTCCAGTGGAATTTGAATTGATAATCTTCTTTTGCTTCTTTAATTATATCCATTTACAGCCATTCACCTTAGTTTCTCTATAGTATTTGATTTCATAAGTTAGTATGACTGTATTTGAAGAAGAATATAGGAAATGCAACTGTTCACTATAATATTTGATTCGTTTGATTGTTAGGTATGAAGCTAGTAAGATCGTACTAAAGAAGAATATTTGAATTGCAATTGTTAACTATGTTCCTGTACCACAACGATGTTGCAGGGTAAAACTAATGTCAGGTCCTGCACCTCACACGCAACTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGAGCTTATTACGTATCATACAACTTAAACATTTTTGGTACTGTAAAGAGCTTATAGTGAGGTTTGTTTCTCGTTTAACTAACAAGATCGATTTTGTCAAATACTATTTACTGGCAATGTATTTTATTTGAAGAGTTCTTTTAATCAATTGAATGAAAAGTAGGCTAATTTGAGCTTAGCTGGTTTAGATGATCATTCTCCACCATGCTCTTTAAGCCATGAAGGGAAAAAGGAAAGGTTGTATTTATATCTAGGTGCTCATTTTGAATAATATATTTCCTAGCGTCTTATGAGTTTTTAATCATGGG

mRNA sequence

CTGGTGGTACAACCACCAATAAACAAACCCTAATTTTACTCCGATTTTGCAATACTTGAGCTCTAGATTGAAGAACATGGGAGGAAAATGTCCTCACAGAAGCGTAAAAAAGCGGAGATACTCACACAAGACCGCTCGGCGAACGAAATTTCTTGTCAAAGGGGATGATATGGTTTACAATGAATTAGCGAAACCTGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGACCGATACTTTGCGAATGTGTCTGTGAGGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAGGGTAAAACTAATGTCAGGTCCTGCACCTCACACGCAACTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGAGCTTATTACGTATCATACAACTTAAACATTTTTGGTACTGTAAAGAGCTTATAGTGAGGTTTGTTTCTCGTTTAACTAACAAGATCGATTTTGTCAAATACTATTTACTGGCAATGTATTTTATTTGAAGAGTTCTTTTAATCAATTGAATGAAAAGTAGGCTAATTTGAGCTTAGCTGGTTTAGATGATCATTCTCCACCATGCTCTTTAAGCCATGAAGGGAAAAAGGAAAGGTTGTATTTATATCTAGGTGCTCATTTTGAATAATATATTTCCTAGCGTCTTATGAGTTTTTAATCATGGG

Coding sequence (CDS)

ATGGGAGGAAAATGTCCTCACAGAAGCGTAAAAAAGCGGAGATACTCACACAAGACCGCTCGGCGAACGAAATTTCTTGTCAAAGGGGATGATATGGTTTACAATGAATTAGCGAAACCTGAGGTAGAGAGGCCTTCTCTTCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCCTGCACTGCGACCGATACTTTGCGAATGTGTCTGTGAGGGATGAGCATTTCAAGACCAAGCGTCACAGGAAGAGGGTAAAACTAATGTCAGGTCCTGCACCTCACACGCAACTGGACGCCGAGCTTGCTGCTGGTATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGA

Protein sequence

MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM

Homology

[Close]

BLAST of IVF0007097 vs. ExPASy Swiss-Prot
Match: B0BLT0 (Zinc finger protein 593 OS=Xenopus tropicalis OX=8364 GN=znf593 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 7   HRSVKKRRYSH--KTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCL 66
           H+S KK+  S   KT RR K L    D +++++ KPE  +  L   +D  LPG  Q+YCL
Sbjct: 10  HKSDKKKNISKLWKTKRRVKDL----DQIHHDM-KPENAKLLLNQEIDYQLPGNAQHYCL 69

Query: 67  HCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMG 109
           HC RYF ++    EHFKTK H++R+K +    P+TQ +AE AAGMG
Sbjct: 70  HCSRYFVDLKTLKEHFKTKVHKRRLKQLR-EEPYTQEEAERAAGMG 109

[Close]

BLAST of IVF0007097 vs. ExPASy Swiss-Prot
Match: Q08004 (Bud site selection protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BUD20 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.1e-12
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 14  RYS---HKTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCLHCDRYF 73
           RYS   +KT RRT+ L    D++YN+L+  E  +  L  P+DE  PG+GQ+YC+HC +Y 
Sbjct: 3   RYSVKRYKTKRRTRDL----DLIYNDLSTKESVQKLLNQPLDETKPGLGQHYCIHCAKYM 62

Query: 74  ANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGM 110
                   H K K H++RVK + G  P+TQ  ++ AAG  +
Sbjct: 63  ETAIALKTHLKGKVHKRRVKELRG-VPYTQEVSDAAAGYNL 98

[Close]

BLAST of IVF0007097 vs. ExPASy Swiss-Prot
Match: Q9P370 (Zinc finger protein bud20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bud20 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-11
Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0


Query: 10  VKKRRYSHKTAR----RTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCLHCD 69
           V ++R  H        RT+   +  D ++N+L + E +   LP+D DLPG+GQ+YC+ C 
Sbjct: 4   VARKRKHHSNGNHALFRTRVYGRDLDQIHNDLTESE-KFDKLPIDPDLPGLGQHYCIECA 63

Query: 70  RYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMP 111
           RYF +      H K K H++R+K +    P+TQ +AE A  +G P
Sbjct: 64  RYFDSSQALLVHKKGKVHKRRLKNLR-EEPYTQEEAEAAVNIGQP 106

[Close]

BLAST of IVF0007097 vs. ExPASy Swiss-Prot
Match: Q9U239 (Zinc finger protein 593 homolog OS=Caenorhabditis elegans OX=6239 GN=Y56A3A.18 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.6e-11
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 6   PHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSL--PVDEDLPGMGQYYCLH 65
           P    +K   S+KT +R     K  D ++ +L KPE     L   +D DLPG GQ+YC+ 
Sbjct: 2   PSGGQRKHTISNKTRKRPG---KDLDQIHEDL-KPEKAAKLLQQEIDYDLPGNGQFYCIE 61

Query: 66  CDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMG 109
           C+R+F +   R  H KTK H+ RVK +    P+TQ +A  A G G
Sbjct: 62  CERHFVDEKTRQLHRKTKLHKNRVKTLK-EVPYTQAEANAAGGSG 101

[Close]

BLAST of IVF0007097 vs. ExPASy Swiss-Prot
Match: Q553S1 (Zinc finger protein 593 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275351 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.3e-11
Identity = 39/117 (33.33%), Postives = 60/117 (51.28%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPS-LPVDEDLPGMGQY 60
           MG    H     ++  +K AR TK   K  D +++E+    +++ S   VD DLPGMGQ 
Sbjct: 1   MGRYSGHGGTHTKKKQYKRARSTKNRAKDIDQIFDEIQPETIDKFSKFEVDPDLPGMGQN 60

Query: 61  YCLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKL 117
           YC+HC ++F        H K K H+ RVK +    P++  ++++       DNG KL
Sbjct: 61  YCIHCSKHFVTNEDLQSHIKGKPHKIRVKELK-TKPYSLAESQIPV-----DNGVKL 111

[Close]

BLAST of IVF0007097 vs. ExPASy TrEMBL
Match: A0A1S3CH13 (zinc finger protein 593 OS=Cucumis melo OX=3656 GN=LOC103500829 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 120
           CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of IVF0007097 vs. ExPASy TrEMBL
Match: A0A0A0KHA1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446540 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.5e-62
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 120
           CLHCDRYFANVSVRDEHFKTKRHRKRVK M GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of IVF0007097 vs. ExPASy TrEMBL
Match: A0A6J1CRE9 (zinc finger protein 593 OS=Momordica charantia OX=3673 GN=LOC111013565 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.6e-61
Identity = 113/119 (94.96%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL KP+VERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 120
           CLHCDRYFANVSVRDEHFKTKRHRKR+KLM+GPAPHTQLDAELAAGMGMPDNGPKLM+M
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRMKLMTGPAPHTQLDAELAAGMGMPDNGPKLMSM 119

[Close]

BLAST of IVF0007097 vs. ExPASy TrEMBL
Match: A0A6J1HD68 (zinc finger protein 593 OS=Cucurbita moschata OX=3662 GN=LOC111463050 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.0e-60
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFL+ GDDMVY+ L KPEVERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLINGDDMVYDALKKPEVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 120
           CLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLDA+LAAGMGMPDNGPKLMAM
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMMGPAPHTQLDADLAAGMGMPDNGPKLMAM 119

[Close]

BLAST of IVF0007097 vs. ExPASy TrEMBL
Match: A0A6J1I5Q7 (zinc finger protein 593 OS=Cucurbita maxima OX=3661 GN=LOC111471272 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 8.9e-60
Identity = 111/119 (93.28%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHK+ARRTKFL+ GDDMVY+ L KPEVERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKSARRTKFLINGDDMVYDALKKPEVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 120
           CLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLDA+LAAGMGMPDNGPKLMAM
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMMGPAPHTQLDADLAAGMGMPDNGPKLMAM 119

[Close]

BLAST of IVF0007097 vs. NCBI nr
Match: XP_008462489.1 (PREDICTED: zinc finger protein 593 [Cucumis melo])

HSP 1 Score: 249 bits (637), Expect = 1.21e-83
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 119
           CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of IVF0007097 vs. NCBI nr
Match: XP_004143276.1 (zinc finger protein 593 [Cucumis sativus] >KGN48194.1 hypothetical protein Csa_004178 [Cucumis sativus])

HSP 1 Score: 245 bits (625), Expect = 8.23e-82
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 119
           CLHCDRYFANVSVRDEHFKTKRHRKRVK M GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKQMLGPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of IVF0007097 vs. NCBI nr
Match: XP_038882974.1 (zinc finger protein 593 [Benincasa hispida])

HSP 1 Score: 241 bits (615), Expect = 2.76e-80
Identity = 114/119 (95.80%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+ELAKPEVE+ SLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELAKPEVEKTSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 119
           CLHCDRYFANVSVRDEHFKTKRHRKR+KLM+GPAPHTQLDAELAAGMGMPDNGPKLMAM
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRLKLMAGPAPHTQLDAELAAGMGMPDNGPKLMAM 119

[Close]

BLAST of IVF0007097 vs. NCBI nr
Match: XP_022143723.1 (zinc finger protein 593 [Momordica charantia])

HSP 1 Score: 241 bits (615), Expect = 2.76e-80
Identity = 113/119 (94.96%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVY+EL KP+VERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYDELKKPDVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 119
           CLHCDRYFANVSVRDEHFKTKRHRKR+KLM+GPAPHTQLDAELAAGMGMPDNGPKLM+M
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRMKLMTGPAPHTQLDAELAAGMGMPDNGPKLMSM 119

[Close]

BLAST of IVF0007097 vs. NCBI nr
Match: XP_022962632.1 (zinc finger protein 593 [Cucurbita moschata] >XP_023517301.1 zinc finger protein 593 [Cucurbita pepo subsp. pepo] >KAG7027247.1 Zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238 bits (607), Expect = 4.59e-79
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MGGKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYY 60
           MGGKCPHRSVKKRRYSHKTARRTKFL+ GDDMVY+ L KPEVERPSLPVDEDLPGMGQYY
Sbjct: 1   MGGKCPHRSVKKRRYSHKTARRTKFLINGDDMVYDALKKPEVERPSLPVDEDLPGMGQYY 60

Query: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMAM 119
           CLHCDRYFANVSVRDEHFKTKRHRKRVKLM GPAPHTQLDA+LAAGMGMPDNGPKLMAM
Sbjct: 61  CLHCDRYFANVSVRDEHFKTKRHRKRVKLMMGPAPHTQLDADLAAGMGMPDNGPKLMAM 119

[Close]

BLAST of IVF0007097 vs. TAIR 10
Match: AT2G36930.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 193.0 bits (489), Expect = 1.4e-49
Identity = 88/116 (75.86%), Postives = 100/116 (86.21%), Query Frame = 0


Query: 3   GKCPHRSVKKRRYSHKTARRTKFLVKGDDMVYNELAKPEVERPSLPVDEDLPGMGQYYCL 62
           G+CP R VKKRR SHKTARR KF VKGDD+VY EL KPE E   L +DEDLPGMGQ+YCL
Sbjct: 2   GRCPTRKVKKRRLSHKTARRDKFEVKGDDLVYTELRKPETEIKPLQLDEDLPGMGQFYCL 61

Query: 63  HCDRYFANVSVRDEHFKTKRHRKRVKLMSGPAPHTQLDAELAAGMGMPDNGPKLMA 119
           HCDRYF+NVSVRD+HFKTK+H+KRV +M G APH+QLDA+LA GMGMPDNGPKLM+
Sbjct: 62  HCDRYFSNVSVRDDHFKTKKHKKRVNMMMGQAPHSQLDADLAGGMGMPDNGPKLMS 117

The following BLAST results are available for this feature:

BLAST of IVF0007097 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0BLT0	2.4e-14	45.28	Zinc finger protein 593 OS=Xenopus tropicalis OX=8364 GN=znf593 PE=2 SV=1	[more]
Q08004	5.1e-12	40.59	Bud site selection protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]
Q9P370	4.3e-11	36.19	Zinc finger protein bud20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)...	[more]
Q9U239	5.6e-11	39.05	Zinc finger protein 593 homolog OS=Caenorhabditis elegans OX=6239 GN=Y56A3A.18 P...	[more]
Q553S1	7.3e-11	33.33	Zinc finger protein 593 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G027...	[more]

BLAST of IVF0007097 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CH13	1.0e-63	100.00	zinc finger protein 593 OS=Cucumis melo OX=3656 GN=LOC103500829 PE=4 SV=1	[more]
A0A0A0KHA1	2.5e-62	98.32	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G446540 P...	[more]
A0A6J1CRE9	3.6e-61	94.96	zinc finger protein 593 OS=Momordica charantia OX=3673 GN=LOC111013565 PE=4 SV=1	[more]
A0A6J1HD68	3.0e-60	94.12	zinc finger protein 593 OS=Cucurbita moschata OX=3662 GN=LOC111463050 PE=4 SV=1	[more]
A0A6J1I5Q7	8.9e-60	93.28	zinc finger protein 593 OS=Cucurbita maxima OX=3661 GN=LOC111471272 PE=4 SV=1	[more]

BLAST of IVF0007097 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462489.1	1.21e-83	100.00	PREDICTED: zinc finger protein 593 [Cucumis melo]	[more]
XP_004143276.1	8.23e-82	98.32	zinc finger protein 593 [Cucumis sativus] >KGN48194.1 hypothetical protein Csa_0...	[more]
XP_038882974.1	2.76e-80	95.80	zinc finger protein 593 [Benincasa hispida]	[more]
XP_022143723.1	2.76e-80	94.96	zinc finger protein 593 [Momordica charantia]	[more]
XP_022962632.1	4.59e-79	94.12	zinc finger protein 593 [Cucurbita moschata] >XP_023517301.1 zinc finger protein...	[more]

BLAST of IVF0007097 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36930.1	1.4e-49	75.86	zinc finger (C2H2 type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 56..90 e-value: 5.4E-10 score: 49.2
IPR022755	Zinc finger, double-stranded RNA binding	PFAM	PF12171	zf-C2H2_jaz	coord: 58..84 e-value: 2.7E-9 score: 37.0
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 45..109 e-value: 2.1E-23 score: 84.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR47444	EXPRESSED PROTEIN	coord: 3..118
None	No IPR available	PANTHER	PTHR47444:SF2	BNAA03G16890D PROTEIN	coord: 3..118
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 61..83
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 47..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0007097.4	IVF0007097.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding