IVF0006945 (gene) Melon (IVF77) v1

Overview


Name	IVF0006945
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein TPR1-like isoform X1
Location	chr07: 523893 .. 525049 (+)
RNA-Seq Expression	IVF0006945
Synteny	IVF0006945

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGACCCCGATCCCGATCGTGCCTTGCTCTTCCTCATCCTCCAATTCCTCGACCACCAAAACCTCTCGGAGACCGCTCGATCGTAAGAATAATTATTGTCATTATTTTGTATATTCAAACGTACGTTTAAATGGTGATATTGTGTTTGGTTTATTTGTAGATTGGAATGTGAAACGGGATTGTTCTTCAACATGACTTATTTTGAGGAGTTGTTGAACTGTTGTGCTTATAATGAGGCTGAAAGCTACCTTTGTGGATTCACTGATATTCACGATAATATTTATTCCACAAAGATCTACTTTGGGATTAGAAAGCTCAAATTCCTTGAAGCACTAGCAGAGTACGTCTGATCTACGTCCTTTAATAATAATTAATTACATCTATTCTAAAATATTTGGAAGATTGATTGATTACAAGGATAATTTAACTCAAACTTACGATGATGAAAACTATATATATGCAGTGGAGAGCGGGAGGTTGCTCGTGAAGTGGTTGAAAAGGACATCGAAATCTTCGACCAATATAATCCCGGGTTGGTCCAGCAAGCTTTTGAGCTACTCCAAATGGACAATTTTATGCAAGTTTTCAAATTCCTTATCATTTTTTCTCTCCCTAATCTTAAATTACGAATTTGGTCCTATTTTATATTTTAAAAACCAAATTTTAAACTTTAACTAAATTAAAATTCAGTCCTGTGAATTTTAAAGTTTTCGTCGAATTTAGTTAATCGGTTTTCTGCTCTTGTATATCTTTAGAGTTGTTTTTGTCAACCTAATTTATTTTGTTGATTACCTTCTTCGTGTTCAATATTTAACAAAAATCTTAAGAAGATTAATGATCTAATCAAATTATAGATATACCAAATTGTAATCAAAGGACCAAATATATAGCGTTTCTTTTTCAAAAACATGATATGTCATCACTCTTCATGAAATGCAGGTCTCACATATTGCTTTCAAGTTACAAAAATATGAAAGAAGCAAGAAAAGTTGTGATGGAAAATATCAAGAAATGCATTGAAGCTAATCCCCTTCTTCAAGGGAAGCTTTCATTTCCGCCGCTTTCGACGACGCTGCAAGCCTTCTACATGGAGGCTATGGCCTCCCGGGGCAGGGCACCGGCGACTTGCAGGCGAGATTTCAAAGATTGA

mRNA sequence

ATGGCCACCGACCCCGATCCCGATCGTGCCTTGCTCTTCCTCATCCTCCAATTCCTCGACCACCAAAACCTCTCGGAGACCGCTCGATCATTGGAATGTGAAACGGGATTGTTCTTCAACATGACTTATTTTGAGGAGTTGTTGAACTGTTGTGCTTATAATGAGGCTGAAAGCTACCTTTGTGGATTCACTGATATTCACGATAATATTTATTCCACAAAGATCTACTTTGGGATTAGAAAGCTCAAATTCCTTGAAGCACTAGCAGATGGAGAGCGGGAGGTTGCTCGTGAAGTGGTTGAAAAGGACATCGAAATCTTCGACCAATATAATCCCGGGTCTCACATATTGCTTTCAAGTTACAAAAATATGAAAGAAGCAAGAAAAGTTGTGATGGAAAATATCAAGAAATGCATTGAAGCTAATCCCCTTCTTCAAGGGAAGCTTTCATTTCCGCCGCTTTCGACGACGCTGCAAGCCTTCTACATGGAGGCTATGGCCTCCCGGGGCAGGGCACCGGCGACTTGCAGGCGAGATTTCAAAGATTGA

Coding sequence (CDS)

ATGGCCACCGACCCCGATCCCGATCGTGCCTTGCTCTTCCTCATCCTCCAATTCCTCGACCACCAAAACCTCTCGGAGACCGCTCGATCATTGGAATGTGAAACGGGATTGTTCTTCAACATGACTTATTTTGAGGAGTTGTTGAACTGTTGTGCTTATAATGAGGCTGAAAGCTACCTTTGTGGATTCACTGATATTCACGATAATATTTATTCCACAAAGATCTACTTTGGGATTAGAAAGCTCAAATTCCTTGAAGCACTAGCAGATGGAGAGCGGGAGGTTGCTCGTGAAGTGGTTGAAAAGGACATCGAAATCTTCGACCAATATAATCCCGGGTCTCACATATTGCTTTCAAGTTACAAAAATATGAAAGAAGCAAGAAAAGTTGTGATGGAAAATATCAAGAAATGCATTGAAGCTAATCCCCTTCTTCAAGGGAAGCTTTCATTTCCGCCGCTTTCGACGACGCTGCAAGCCTTCTACATGGAGGCTATGGCCTCCCGGGGCAGGGCACCGGCGACTTGCAGGCGAGATTTCAAAGATTGA

Protein sequence

MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDFKD

Homology

[Close]

BLAST of IVF0006945 vs. ExPASy Swiss-Prot
Match: Q5NBT9 (Protein TPR1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR1 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFEE ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEEKVHAGEWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRAKAVDILVKDLKVFSTFNEELYKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL + KL FP L  +
Sbjct: 126 ENEQLSKYGDTKSARSIMLIELKKLIEANPLFREKLVFPTLKAS 169

[Close]

BLAST of IVF0006945 vs. ExPASy Swiss-Prot
Match: Q0WV90 (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL + KL FP L T+
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of IVF0006945 vs. ExPASy Swiss-Prot
Match: Q0J7U6 (Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR2 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-29
Identity = 69/164 (42.07%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+  +FNM +FE+L+    ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGFTKVED 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A E++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL + KL+FPP   +
Sbjct: 126 QNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVS 169

[Close]

BLAST of IVF0006945 vs. ExPASy Swiss-Prot
Match: Q94AI7 (Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.3e-29
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPL 155
            +  LS Y + K AR +++  +KK IEANPL + KL FP L
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of IVF0006945 vs. ExPASy Swiss-Prot
Match: Q10NY2 (Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-28
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G +FNM YFE+ +    ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFYFNMKYFEDEVINGNWDEVERYLGGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A E++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFASFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL + KL FP L ++
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKSS 169

[Close]

BLAST of IVF0006945 vs. ExPASy TrEMBL
Match: A0A5D3D8T8 (Protein TPR1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00900 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180
           YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of IVF0006945 vs. ExPASy TrEMBL
Match: E5GCC7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180
           YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of IVF0006945 vs. ExPASy TrEMBL
Match: A0A1S3BVS3 (protein TPR1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180
           YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of IVF0006945 vs. ExPASy TrEMBL
Match: A0A1S3BUX9 (protein TPR1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.4e-96
Identity = 182/197 (92.39%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA 180
                   SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA
Sbjct: 121 LLQMDNFMSHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA 180

Query: 181 MASRGRAPATCRRDFKD 183
           MASRGRAPATCRRDFKD
Sbjct: 181 MASRGRAPATCRRDFKD 197

[Close]

BLAST of IVF0006945 vs. ExPASy TrEMBL
Match: A0A0A0L5R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652830 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.9e-96
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPGSH+LLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGSHMLLSS 120

Query: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180
           Y+NMKEARKVVMENIKKCIEANPLL+GKLSFPPLSTTLQAFY EAMASR R PATCRRDF
Sbjct: 121 YRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDF 180

Query: 181 KD 183
           KD
Sbjct: 181 KD 182

[Close]

BLAST of IVF0006945 vs. NCBI nr
Match: XP_008452906.1 (PREDICTED: protein TPR1-like isoform X2 [Cucumis melo] >ADN34126.1 hypothetical protein [Cucumis melo subsp. melo] >TYK19976.1 protein TPR1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 371 bits (953), Expect = 8.93e-130
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGSHILLSS 120

Query: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180
           YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF
Sbjct: 121 YKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDF 180

Query: 181 KD 182
           KD
Sbjct: 181 KD 182

[Close]

BLAST of IVF0006945 vs. NCBI nr
Match: XP_008452905.1 (PREDICTED: protein TPR1-like isoform X1 [Cucumis melo])

HSP 1 Score: 361 bits (927), Expect = 1.40e-125
Identity = 182/197 (92.39%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA 180
                   SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA
Sbjct: 121 LLQMDNFMSHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA 180

Query: 181 MASRGRAPATCRRDFKD 182
           MASRGRAPATCRRDFKD
Sbjct: 181 MASRGRAPATCRRDFKD 197

[Close]

BLAST of IVF0006945 vs. NCBI nr
Match: KAA0064616.1 (protein TPR1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 354 bits (908), Expect = 2.16e-122
Identity = 182/216 (84.26%), Postives = 182/216 (84.26%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 ---------------------------SHILLSSYKNMKEARKVVMENIKKCIEANPLLQ 180
                                      SHILLSSYKNMKEARKVVMENIKKCIEANPLLQ
Sbjct: 121 LLQMDNFMQVFKFLIIFSLPNLKLRIWSHILLSSYKNMKEARKVVMENIKKCIEANPLLQ 180

Query: 181 GKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDFKD 182
           GKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDFKD
Sbjct: 181 GKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDFKD 216

[Close]

BLAST of IVF0006945 vs. NCBI nr
Match: KAE8649955.1 (hypothetical protein Csa_012980 [Cucumis sativus])

HSP 1 Score: 350 bits (897), Expect = 5.25e-121
Identity = 175/197 (88.83%), Postives = 178/197 (90.36%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTTLQAFYMEA 180
                   SH+LLSSY+NMKEARKVVMENIKKCIEANPLL+GKLSFPPLSTTLQAFY EA
Sbjct: 121 LLQMDNFMSHMLLSSYRNMKEARKVVMENIKKCIEANPLLEGKLSFPPLSTTLQAFYTEA 180

Query: 181 MASRGRAPATCRRDFKD 182
           MASR R PATCRRDFKD
Sbjct: 181 MASRSRPPATCRRDFKD 197

[Close]

BLAST of IVF0006945 vs. NCBI nr
Match: XP_031740451.1 (protein TPR1 [Cucumis sativus])

HSP 1 Score: 340 bits (873), Expect = 5.56e-117
Identity = 175/221 (79.19%), Postives = 178/221 (80.54%), Query Frame = 0


Query: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60
           MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL
Sbjct: 1   MATDPDPDRALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYL 60

Query: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNPG------- 120
           CGFTDIHDNIYSTKIYFGIRKLKFLEAL DGEREVAREVVEKDIEIFDQYNPG       
Sbjct: 61  CGFTDIHDNIYSTKIYFGIRKLKFLEALTDGEREVAREVVEKDIEIFDQYNPGLVQQAFE 120

Query: 121 --------------------------------SHILLSSYKNMKEARKVVMENIKKCIEA 180
                                           SH+LLSSY+NMKEARKVVMENIKKCIEA
Sbjct: 121 LLQMDNFMQVFKFLMIFLSLMLKLRILVHTTSSHMLLSSYRNMKEARKVVMENIKKCIEA 180

Query: 181 NPLLQGKLSFPPLSTTLQAFYMEAMASRGRAPATCRRDFKD 182
           NPLL+GKLSFPPLSTTLQAFY EAMASR R PATCRRDFKD
Sbjct: 181 NPLLEGKLSFPPLSTTLQAFYTEAMASRSRPPATCRRDFKD 221

[Close]

BLAST of IVF0006945 vs. TAIR 10
Match: AT1G80490.1 (TOPLESS-related 1 )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL + KL FP L T+
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of IVF0006945 vs. TAIR 10
Match: AT1G80490.2 (TOPLESS-related 1 )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPLSTT 158
            +  LS Y + K AR +++  +KK IEANPL + KL FP L T+
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTS 169

[Close]

BLAST of IVF0006945 vs. TAIR 10
Match: AT1G15750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPL 155
            +  LS Y + K AR +++  +KK IEANPL + KL FP L
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of IVF0006945 vs. TAIR 10
Match: AT1G15750.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPL 155
            +  LS Y + K AR +++  +KK IEANPL + KL FP L
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

[Close]

BLAST of IVF0006945 vs. TAIR 10
Match: AT1G15750.3 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 70/161 (43.48%), Postives = 96/161 (59.63%), Query Frame = 0


Query: 9   RALLFLILQFLDHQNLSETARSLECETGLFFNMTYFEELLNCCAYNEAESYLCGFTDIHD 68
           R L+FLILQFLD +   ET   LE E+G FFNM YFE+ ++   ++E E YL GFT + D
Sbjct: 6   RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65

Query: 69  NIYSTKIYFGIRKLKFLEALADGEREVAREVVEKDIEIFDQYNP---------------G 128
           N YS KI+F IRK K+LEAL   +R  A +++ KD+++F  +N                 
Sbjct: 66  NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125

Query: 129 SHILLSSYKNMKEARKVVMENIKKCIEANPLLQGKLSFPPL 155
            +  LS Y + K AR +++  +KK IEANPL + KL FP L
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTL 166

The following BLAST results are available for this feature:

BLAST of IVF0006945 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5NBT9	1.4e-29	43.29	Protein TPR1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR1 PE=1 SV=1	[more]
Q0WV90	1.8e-29	43.29	Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3	[more]
Q0J7U6	3.1e-29	42.07	Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TP...	[more]
Q94AI7	5.3e-29	43.48	Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1	[more]
Q10NY2	2.7e-28	42.68	Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1	[more]

BLAST of IVF0006945 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D8T8	2.3e-99	100.00	Protein TPR1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCC7	2.3e-99	100.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BVS3	2.3e-99	100.00	protein TPR1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1	[more]
A0A1S3BUX9	2.4e-96	92.39	protein TPR1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493786 PE=4 SV=1	[more]
A0A0A0L5R0	6.9e-96	96.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652830 PE=4 SV=1	[more]

BLAST of IVF0006945 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452906.1	8.93e-130	100.00	PREDICTED: protein TPR1-like isoform X2 [Cucumis melo] >ADN34126.1 hypothetical ...	[more]
XP_008452905.1	1.40e-125	92.39	PREDICTED: protein TPR1-like isoform X1 [Cucumis melo]	[more]
KAA0064616.1	2.16e-122	84.26	protein TPR1-like isoform X1 [Cucumis melo var. makuwa]	[more]
KAE8649955.1	5.25e-121	88.83	hypothetical protein Csa_012980 [Cucumis sativus]	[more]
XP_031740451.1	5.56e-117	79.19	protein TPR1 [Cucumis sativus]	[more]

BLAST of IVF0006945 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80490.1	1.3e-30	43.29	TOPLESS-related 1	[more]
AT1G80490.2	1.3e-30	43.29	TOPLESS-related 1	[more]
AT1G15750.1	3.8e-30	43.48	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.2	3.8e-30	43.48	Transducin family protein / WD-40 repeat family protein	[more]
AT1G15750.3	3.8e-30	43.48	Transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 7..39 e-value: 0.0016 score: 27.7
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 7..39 score: 9.413857
IPR027728	Topless family	PANTHER	PTHR44083	TOPLESS-RELATED PROTEIN 1-RELATED	coord: 6..155
None	No IPR available	PANTHER	PTHR44083:SF26	1 ENHANCER LOCUS 2 PROTEIN, PUTATIVE-RELATED	coord: 6..155
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 38..95 score: 8.878816

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006945.1	IVF0006945.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005515	protein binding