Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAAAACACATTCAAAGCACTTTGAACACCCCACGAACCATAAGATTCTTCATTGAAAAAAGGTATGTCGATTTCTGTCTGTGGGTCCATAAAATTCACAATAGAAAAGGGTACATAGCGGAGATTTATAGAGTTGACGAAAGGGGTCGTAGATGTTGCATTCTTGTCCCGGAAGGTATGGATAAATCTGATTGGGCCTATTTCTTTGATATGTTGACTTGTAAAAAGAACTTAGAAAGAAGAGAGCCAGCTTTGAGACTCTCCTCTTGCCGAGATAAAAGCACAAAGAAATACTCCTTATCCTCTGACTCAGATTCACTTCGAAGGTCATATGCTGAAGTTGTCTCAAGTTCAACCAGCTCAGAATCTGAATATTTTTATGCAACCAATAGAACTTCTTTAAAAAACTTCACTCCAACAGTGAGATCTGAAGTGAAGAAAGAGGGCAAAAAGGATGATTTTGACAAGAATAAAGTGGTTATTTTGTCAAGACGATGTTTCCACGATGACTGGGAAAAAATCATAGACAGGCTCAAAGAACAGACTGACTAA
mRNA sequence
ATGGCTGAAAAACACATTCAAAGCACTTTGAACACCCCACGAACCATAAGATTCTTCATTGAAAAAAGGTATGTCGATTTCTGTCTGTGGGTCCATAAAATTCACAATAGAAAAGGGTACATAGCGGAGATTTATAGAGTTGACGAAAGGGGTCGTAGATGTTGCATTCTTGTCCCGGAAGGTATGGATAAATCTGATTGGGCCTATTTCTTTGATATGTTGACTTGTAAAAAGAACTTAGAAAGAAGAGAGCCAGCTTTGAGACTCTCCTCTTGCCGAGATAAAAGCACAAAGAAATACTCCTTATCCTCTGACTCAGATTCACTTCGAAGGTCATATGCTGAAGTTGTCTCAAGTTCAACCAGCTCAGAATCTGAATATTTTTATGCAACCAATAGAACTTCTTTAAAAAACTTCACTCCAACAGTGAGATCTGAAGTGAAGAAAGAGGGCAAAAAGGATGATTTTGACAAGAATAAAGTGGTTATTTTGTCAAGACGATGTTTCCACGATGACTGGGAAAAAATCATAGACAGGCTCAAAGAACAGACTGACTAA
Coding sequence (CDS)
ATGGCTGAAAAACACATTCAAAGCACTTTGAACACCCCACGAACCATAAGATTCTTCATTGAAAAAAGGTATGTCGATTTCTGTCTGTGGGTCCATAAAATTCACAATAGAAAAGGGTACATAGCGGAGATTTATAGAGTTGACGAAAGGGGTCGTAGATGTTGCATTCTTGTCCCGGAAGGTATGGATAAATCTGATTGGGCCTATTTCTTTGATATGTTGACTTGTAAAAAGAACTTAGAAAGAAGAGAGCCAGCTTTGAGACTCTCCTCTTGCCGAGATAAAAGCACAAAGAAATACTCCTTATCCTCTGACTCAGATTCACTTCGAAGGTCATATGCTGAAGTTGTCTCAAGTTCAACCAGCTCAGAATCTGAATATTTTTATGCAACCAATAGAACTTCTTTAAAAAACTTCACTCCAACAGTGAGATCTGAAGTGAAGAAAGAGGGCAAAAAGGATGATTTTGACAAGAATAAAGTGGTTATTTTGTCAAGACGATGTTTCCACGATGACTGGGAAAAAATCATAGACAGGCTCAAAGAACAGACTGACTAA
Protein sequence
MAEKHIQSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSDWAYFFDMLTCKKNLERREPALRLSSCRDKSTKKYSLSSDSDSLRRSYAEVVSSSTSSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKIIDRLKEQTD
Homology
BLAST of IVF0006668 vs. ExPASy TrEMBL
Match:
A0A5A7TEP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00440 PE=4 SV=1)
HSP 1 Score: 241.1 bits (614), Expect = 3.6e-60
Identity = 117/183 (63.93%), Postives = 147/183 (80.33%), Query Frame = 0
Query: 7 QSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSD 66
++ LNTPRT RFF+EKRYVDFCLWV KIHNR+GYIAEIYRVD+RGR+CCILVPEG+DK+
Sbjct: 59 KALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTG 118
Query: 67 WAYFFDMLTCKKNLERREPALRLSSCRDKSTKK----YSLSSDSDSLRRSYAEVVSSSTS 126
WA F DMLTCKK +++E + R +DK +K Y S+DS+S R++YAEVVSS +S
Sbjct: 119 WALFSDMLTCKKTSDKKEISTRHYYNQDKGKEKIQKPYDSSTDSESPRKTYAEVVSSFSS 178
Query: 127 SESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKIIDRLKE 186
SES+Y A N +SLK F P ++SE++KE +K+D D K +ILSRRCFHDDW+KIIDRL+E
Sbjct: 179 SESDYSKAKNTSSLKRFLPAMKSEIRKEERKNDIDWEKTIILSRRCFHDDWDKIIDRLRE 238
BLAST of IVF0006668 vs. ExPASy TrEMBL
Match:
A0A5A7V5Z9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G001780 PE=4 SV=1)
HSP 1 Score: 237.7 bits (605), Expect = 4.0e-59
Identity = 116/183 (63.39%), Postives = 146/183 (79.78%), Query Frame = 0
Query: 7 QSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSD 66
++ LNTPRT RFF+EKRYVDFCLWV KIHNR+GYIAEIYRVD+RGR+CCILVPEG+DK+
Sbjct: 59 KALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTG 118
Query: 67 WAYFFDMLTCKKNLERREPALRLSSCRDKSTKK----YSLSSDSDSLRRSYAEVVSSSTS 126
WA F DMLTCKK +++E + R +DK +K Y S+DS+S R++YAEVVSS +S
Sbjct: 119 WALFNDMLTCKKTSDKKEISTRHFYNQDKGKEKIQKPYDSSTDSESPRKTYAEVVSSFSS 178
Query: 127 SESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKIIDRLKE 186
SES+Y A + +SLK F P ++SE++KE +K+D D K +ILSRRCFHDDW KIIDRL+E
Sbjct: 179 SESDYSKAKSTSSLKRFLPALKSEIRKEERKNDIDWEKTIILSRRCFHDDWAKIIDRLRE 238
BLAST of IVF0006668 vs. ExPASy TrEMBL
Match:
A0A5D3D494 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00820 PE=4 SV=1)
HSP 1 Score: 236.5 bits (602), Expect = 8.9e-59
Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 0
Query: 7 QSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSD 66
++ LNTPRT RFF+EKRYVDFCLWV KIHNR+GYIAEIYRVD+RGR+CCILVPEG+DK+
Sbjct: 59 KALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTG 118
Query: 67 WAYFFDMLTCKKNLERREPALRLSSCRDKSTKK----YSLSSDSDSLRRSYAEVVSSSTS 126
WA F DMLTCKK +++E + R +DK +K Y S+DS+S +++YAEVVSS +S
Sbjct: 119 WALFNDMLTCKKTSDKKEISTRHFYNQDKGKEKIQKPYDSSTDSESPKKTYAEVVSSFSS 178
Query: 127 SESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKIIDRLKE 186
SES+Y A + +SLK F P ++SE++KE +K+D D K +ILSRRCFHDDW KIIDRL+E
Sbjct: 179 SESDYSKAKSTSSLKRFLPALKSEIRKEERKNDIDWEKTIILSRRCFHDDWAKIIDRLRE 238
BLAST of IVF0006668 vs. ExPASy TrEMBL
Match:
A0A5D3DLT1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00990 PE=4 SV=1)
HSP 1 Score: 219.5 bits (558), Expect = 1.1e-53
Identity = 112/189 (59.26%), Postives = 140/189 (74.07%), Query Frame = 0
Query: 7 QSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSD 66
++ LNTPRT RFF+EKRYVDFCLWV KIHNR+GYIAEIYRVD+RGR+CCILVPEG+DK+
Sbjct: 59 KALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTG 118
Query: 67 WAYFFDMLTCKKNLERREPALRLSSCRDKSTKK----YSLSSDSDSLRRSYAEVVSS--- 126
WA F DMLTCKK +++ R +DK +K Y S+DS++ R++Y E VSS
Sbjct: 119 WALFNDMLTCKKTPDKKVFPTRHYYNQDKGKEKVQQSYDSSTDSETPRKTYVEAVSSSSD 178
Query: 127 ---STSSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKI 186
S+SSES+ + SLK F P ++SE++KE KK+D D K +ILSRRCFHDDW KI
Sbjct: 179 SSISSSSESDCSKTKSTPSLKKFLPALKSEIRKEEKKNDIDWEKSIILSRRCFHDDWAKI 238
BLAST of IVF0006668 vs. ExPASy TrEMBL
Match:
A0A5D3DIP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003990 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 8.7e-46
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 62 MDKSDWAYFFDMLTCKKNLERREPALRLSSCRDKSTKKYSLSSDSDSLRRSYAEVVSSST 121
MDKSDWAYFFDMLTCKKNLERREPALRLSSCRDKSTKKYSLSSDSDSLRRSYAEVVSSST
Sbjct: 1 MDKSDWAYFFDMLTCKKNLERREPALRLSSCRDKSTKKYSLSSDSDSLRRSYAEVVSSST 60
Query: 122 SSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKV 162
SSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKV
Sbjct: 61 SSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKV 100
BLAST of IVF0006668 vs. NCBI nr
Match:
TYK18363.1 (hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa])
HSP 1 Score: 235 bits (599), Expect = 8.36e-74
Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 0
Query: 7 QSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSD 66
++ LNTPRT RFF+EKRYVDFCLWV KIHNR+GYIAEIYRVD+RGR+CCILVPEG+DK+
Sbjct: 59 KALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTG 118
Query: 67 WAYFFDMLTCKKNLERREPALRLSSCRDKSTKK----YSLSSDSDSLRRSYAEVVSSSTS 126
WA F DMLTCKK +++E + R +DK +K Y S+DS+S +++YAEVVSS +S
Sbjct: 119 WALFNDMLTCKKTSDKKEISTRHFYNQDKGKEKIQKPYDSSTDSESPKKTYAEVVSSFSS 178
Query: 127 SESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKIIDRLKE 185
SES+Y A + +SLK F P ++SE++KE +K+D D K +ILSRRCFHDDW KIIDRL+E
Sbjct: 179 SESDYSKAKSTSSLKRFLPALKSEIRKEERKNDIDWEKTIILSRRCFHDDWAKIIDRLRE 238
BLAST of IVF0006668 vs. NCBI nr
Match:
KAA0063662.1 (hypothetical protein E6C27_scaffold329G001780 [Cucumis melo var. makuwa])
HSP 1 Score: 236 bits (602), Expect = 1.28e-73
Identity = 116/183 (63.39%), Postives = 146/183 (79.78%), Query Frame = 0
Query: 7 QSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSD 66
++ LNTPRT RFF+EKRYVDFCLWV KIHNR+GYIAEIYRVD+RGR+CCILVPEG+DK+
Sbjct: 59 KALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTG 118
Query: 67 WAYFFDMLTCKKNLERREPALRLSSCRDKSTKK----YSLSSDSDSLRRSYAEVVSSSTS 126
WA F DMLTCKK +++E + R +DK +K Y S+DS+S R++YAEVVSS +S
Sbjct: 119 WALFNDMLTCKKTSDKKEISTRHFYNQDKGKEKIQKPYDSSTDSESPRKTYAEVVSSFSS 178
Query: 127 SESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKIIDRLKE 185
SES+Y A + +SLK F P ++SE++KE +K+D D K +ILSRRCFHDDW KIIDRL+E
Sbjct: 179 SESDYSKAKSTSSLKRFLPALKSEIRKEERKNDIDWEKTIILSRRCFHDDWAKIIDRLRE 238
BLAST of IVF0006668 vs. NCBI nr
Match:
KAA0041398.1 (hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 239 bits (611), Expect = 4.43e-72
Identity = 117/183 (63.93%), Postives = 147/183 (80.33%), Query Frame = 0
Query: 7 QSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSD 66
++ LNTPRT RFF+EKRYVDFCLWV KIHNR+GYIAEIYRVD+RGR+CCILVPEG+DK+
Sbjct: 59 KALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTG 118
Query: 67 WAYFFDMLTCKKNLERREPALRLSSCRDKSTKK----YSLSSDSDSLRRSYAEVVSSSTS 126
WA F DMLTCKK +++E + R +DK +K Y S+DS+S R++YAEVVSS +S
Sbjct: 119 WALFSDMLTCKKTSDKKEISTRHYYNQDKGKEKIQKPYDSSTDSESPRKTYAEVVSSFSS 178
Query: 127 SESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKIIDRLKE 185
SES+Y A N +SLK F P ++SE++KE +K+D D K +ILSRRCFHDDW+KIIDRL+E
Sbjct: 179 SESDYSKAKNTSSLKRFLPAMKSEIRKEERKNDIDWEKTIILSRRCFHDDWDKIIDRLRE 238
BLAST of IVF0006668 vs. NCBI nr
Match:
KAA0039949.1 (hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK24554.1 hypothetical protein E5676_scaffold266G00990 [Cucumis melo var. makuwa])
HSP 1 Score: 218 bits (555), Expect = 2.85e-63
Identity = 112/189 (59.26%), Postives = 140/189 (74.07%), Query Frame = 0
Query: 7 QSTLNTPRTIRFFIEKRYVDFCLWVHKIHNRKGYIAEIYRVDERGRRCCILVPEGMDKSD 66
++ LNTPRT RFF+EKRYVDFCLWV KIHNR+GYIAEIYRVD+RGR+CCILVPEG+DK+
Sbjct: 59 KALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTG 118
Query: 67 WAYFFDMLTCKKNLERREPALRLSSCRDKSTKK----YSLSSDSDSLRRSYAEVVSSST- 126
WA F DMLTCKK +++ R +DK +K Y S+DS++ R++Y E VSSS+
Sbjct: 119 WALFNDMLTCKKTPDKKVFPTRHYYNQDKGKEKVQQSYDSSTDSETPRKTYVEAVSSSSD 178
Query: 127 -----SSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKVVILSRRCFHDDWEKI 185
SSES+ + SLK F P ++SE++KE KK+D D K +ILSRRCFHDDW KI
Sbjct: 179 SSISSSSESDCSKTKSTPSLKKFLPALKSEIRKEEKKNDIDWEKSIILSRRCFHDDWAKI 238
BLAST of IVF0006668 vs. NCBI nr
Match:
KAA0040366.1 (hypothetical protein E6C27_scaffold460G00770 [Cucumis melo var. makuwa] >TYK23338.1 hypothetical protein E5676_scaffold142G003990 [Cucumis melo var. makuwa])
HSP 1 Score: 191 bits (486), Expect = 2.58e-56
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 62 MDKSDWAYFFDMLTCKKNLERREPALRLSSCRDKSTKKYSLSSDSDSLRRSYAEVVSSST 121
MDKSDWAYFFDMLTCKKNLERREPALRLSSCRDKSTKKYSLSSDSDSLRRSYAEVVSSST
Sbjct: 1 MDKSDWAYFFDMLTCKKNLERREPALRLSSCRDKSTKKYSLSSDSDSLRRSYAEVVSSST 60
Query: 122 SSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKV 161
SSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKV
Sbjct: 61 SSESEYFYATNRTSLKNFTPTVRSEVKKEGKKDDFDKNKV 100
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TEP0 | 3.6e-60 | 63.93 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| A0A5A7V5Z9 | 4.0e-59 | 63.39 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3D494 | 8.9e-59 | 62.84 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3DLT1 | 1.1e-53 | 59.26 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| A0A5D3DIP5 | 8.7e-46 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK18363.1 | 8.36e-74 | 62.84 | hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa] | [more] |
| KAA0063662.1 | 1.28e-73 | 63.39 | hypothetical protein E6C27_scaffold329G001780 [Cucumis melo var. makuwa] | [more] |
| KAA0041398.1 | 4.43e-72 | 63.93 | hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa] | [more] |
| KAA0039949.1 | 2.85e-63 | 59.26 | hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK245... | [more] |
| KAA0040366.1 | 2.58e-56 | 100.00 | hypothetical protein E6C27_scaffold460G00770 [Cucumis melo var. makuwa] >TYK2333... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
