IVF0006562 (gene) Melon (IVF77) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAAATGGAGGCATCACTGGTTTGGAAGTTGCCGAACTGAACAAAGCGGTAATGGTTGGGGATTTGCAAGAGAAGGTGAATGAAACGGTGGTGGTGGAGGATTTGGAAGAGAAGACAAACGAAACGATGGTGGTCGAGGATTTTTAAATGGATGAAAATGGAGGCATCACTGGTTTGGAAGTTGCCGAACTGAACAAAGCGGTAATGGTTGGGGATTTGCAAGAGAAGGTGAATGAAACGGTGGTGGTGGAGGATTTGGAAGAGAAGACAAACGAAACGATGGTGGTCGAGGATTTTTAA ATGGATGAAAATGGAGGCATCACTGGTTTGGAAGTTGCCGAACTGAACAAAGCGGTAATGGTTGGGGATTTGCAAGAGAAGGTGAATGAAACGGTGGTGGTGGAGGATTTGGAAGAGAAGACAAACGAAACGATGGTGGTCGAGGATTTTTAA MDENGGITGLEVAELNKAVMVGDLQEKVNETVVVEDLEEKTNETMVVEDF Homology
BLAST of IVF0006562 vs. ExPASy TrEMBL
Match: A0A5A7U1H8 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00570 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.6e-10 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of IVF0006562 vs. ExPASy TrEMBL
Match: A0A5D3CLH6 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001020 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.6e-10 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of IVF0006562 vs. NCBI nr
Match: KAA0049713.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 6.53e-13 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of IVF0006562 vs. NCBI nr
Match: TYK12162.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 7.19e-13 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of IVF0006562 vs. NCBI nr
Match: KAE8646925.1 (hypothetical protein Csa_020940, partial [Cucumis sativus]) HSP 1 Score: 50.1 bits (118), Expect = 1.57e-06 Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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