IVF0006482 (gene) Melon (IVF77) v1

Overview


Name	IVF0006482
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Location	chr05: 556949 .. 559891 (+)
RNA-Seq Expression	IVF0006482
Synteny	IVF0006482

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCGTCTTCTTCTCATCTATCCGCCATTCCCCTGCGCCGCCCCTCTTCCTCCTCTACACCTTCCTTATCCCATTGTAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCAAGTTCCCTATGCCCAATTGTCGACTATACTGTATCTTTGCATTGTTGCATACTTCTATCCACCATCTCCTCTGTTCAATGAATTGTTTTCTGTTTTGCCCATTCAGTTGTTTCTTACTTATCAGTGGAAGAATGTGATTTCTCTTTTTGGTTGAAAAGCTGATTTTTCTTCGGTCGTTTCACTTTTGTGGACTGTTTTTGTAATCTTATCCCTTTCTTCTCGAGTTTCGTTGTGGTGTTTGTCATCCTCATCTCCAATTGTTATTTCGGATTATCTTAATCTTGCTCTGTCAAATGTTTTGTGCTGCCTGATTTGCTTATATTCGTCTTCCCTTTATGCTCTGTGATAATACTATCTTGCTCAGCTGGGTAACCACATGCGTTAGAACTACAAATTTACTACCAAGTAATCTTTTTTCTCAGTTCCAAAGGGGTATTTTATTTAAGTAGTTGATCAGATCTCCTTCCAATAGGTATGGAAGGTTATTCTAAATTGAAGTTGCCAACACTTTCCTTTAAACAGAATGCACCCCCATCCTCATCCCATAAGTTTTATTGCCTTATATGAGATGCTGGACTTATTAACGTTTTCATGTCTACGTCACTCTAATGCCTAGCTTGGTGCGATTTTGCAGTAAATTAGAAGGTTAGGTCAAGATAGCATAACATGACGAAATGATTTGGTAGTAGTGTAGAGTCATAAGGATATTTTCTGGTTCTTGTACTAATCTGACATTACTTTGTATTGGTCTGTGTTATATATATCGATCATTCCATGGAAAAGATTTGATCCTCATTTTTCTGAATTCAACAGCTAACTCAAAGCCTGTTGTACTTCATTTGACATCGAATTCTGATGATGAAAGCTGCAGTACTGGAGATTCAAGAACACCATCAAAACCGCTAAAAGTAAGGATCTAGGTTACTTATTTGTTTTTTTTAGCTTTATTTCTTCTTAGCGACAGCTTATTCATGATAGCAATTCATGCTTAAGTAATTTACAAATACAACGCTCCAAATGGAGAAGCAACATGTTTAGCTTATATATGTGTAGTTCCTCACATGATGTGCGTCTTTTGACATGGCTTGGTAGCCTTCCAAATTTTTAAATGTGTGTGGTCGACAAATTTAAAATTCCATTGGAATACGACAAGGTTCTAAAATCTTGTAGAATTTCTCATTAGTTTTTCAAAGCAATCAATTAACCATTTTTTAGACAGTGTTGCCTTAAATGCATTTTCAAGTCTCTGTGATTTGATGTTTTAAGAATATAAACCTGATCATCTCTCTGTGACAGCATTGAGATGGGAACGTTTAGCTTTTTTAATATGTAGTCTTAAGCAGGTTACTGCACTTTTATTGTCCGATTAGTAATATATAACAACCTTTTGTGACCACAGGGAACTCAAAACTTGATTTCTCGTCGATGGTGCCTCACATGTTTATGTTCATCTGTGACATTGATGAAGAATTATGGGGGCACGACTGAAGCTATTGCAAATACCATGGATGGAAAACCTGTGTGCCGAAATTGTGGAGGAAGTGGTGCCGTACTTTGTAAGCATGTCTTTTCTTTTTATTATTTGTTAGACACAACACCTTTTGGTCGTTGGATATAATTTTTATTCTTTCATGAAAGGCTTGTGATTTAAAAGTAATGAGCTTCTCCATGGACTTATAACATTTAGAAGTCAAAGAAATAGAACATATATACCGTACTTGGAAAAAAATATTTTGGTAAAGAAAAAGTTGTGTGTATTCTTTTGTAAAAAATTCTTCAAGTTCTCTTCCAAACATGTTATAAAAAAAACCTTATATCATTTTGGCATCGTTTTGATTATTCATGTATTCGGACAAAAATTCAAGTACTTCCTCATATGAGCTTATCTTTCGAGTTAAAATACTTTCCTTTTCATTTCTTATCTTCCCTGCTTTGAGTTTTTCCTTTCTAAATATGTATAGAAGTTTGATGACACATACATTTTATTTTCAATTTATTTGCTTCAACATTTTTTTTTATCTATCTATGATCCCTATTTTCCATGGGATGCTTACTGTTCTTTGTTTTAGGTGACATGTGCGGTGGTACAGGGAAATGGAAAGCTCTAAATAGAAAACGGGCTAAAGATGTCTATGAGTTTACAGAATGTCCAAATTGTTATGGTAACTATTCATCTTGCTTACAAATAATGGTGACCTCATTAATGAATGCTTCATATATCTGCATGGTTTCAGTTTGATACAACTTCACGTCTGTTGGAAAGCGTTGTCCTCTTGTAATGCAGCCTTGAGACATAGAAAAATCGATTTCTCCCGCTCTCTCTCTCTCTCTCTTTTCTGTCCAGAAATTTAGATCTTTACGATTGATGAATATTTTGATTCATCATGTTAATATGATCAATCATGTCGTGGTTAGATATTAAAACTAAAACATTCCTTGGATGTCAATATGCTGTTGAACTCGCTTTCAAATCCATATCCCGAATCTGAAGCAAGAATCTTGGTTTCTTTATTGTATTCATCACTTATCTTTGTTACCAACCGACAATCTCTGTATTGACCAACTACAACTACAACTGGCAACGAGAGTTTTAAATTCTTGATTCATATGGATTTGAAATGTATCACGTTTAAACTTTCAATATCTGTGCTCATCTCTTACCCTTTGTACTAATTTTCAAAATTTATTGCGACAGGTAGAGGAAAACTTGTATGCCCTGTTTGTCTAGGAACTGGTTTACCGAACAACAAAGGTCTCCTAAGAAGGCCCGATGCACGACAATTGCTCGATAAGATGTACAACGGTCGCTTATTACCAAATTACTGA

mRNA sequence

ATGATGGCGTCTTCTTCTCATCTATCCGCCATTCCCCTGCGCCGCCCCTCTTCCTCCTCTACACCTTCCTTATCCCATTCTAACTCAAAGCCTGTTGTACTTCATTTGACATCGAATTCTGATGATGAAAGCTGCAGTACTGGAGATTCAAGAACACCATCAAAACCGCTAAAAGGAACTCAAAACTTGATTTCTCGTCGATGGTGCCTCACATGTTTATGTTCATCTGTGACATTGATGAAGAATTATGGGGGCACGACTGAAGCTATTGCAAATACCATGGATGGAAAACCTGTGTGCCGAAATTGTGGAGGAAGTGGTGCCGTACTTTGTGACATGTGCGGTGGTACAGGGAAATGGAAAGCTCTAAATAGAAAACGGGCTAAAGATGTCTATGAGTTTACAGAATGTCCAAATTGTTATGGTAGAGGAAAACTTGTATGCCCTGTTTGTCTAGGAACTGGTTTACCGAACAACAAAGGTCTCCTAAGAAGGCCCGATGCACGACAATTGCTCGATAAGATGTACAACGGTCGCTTATTACCAAATTACTGA

Coding sequence (CDS)

ATGATGGCGTCTTCTTCTCATCTATCCGCCATTCCCCTGCGCCGCCCCTCTTCCTCCTCTACACCTTCCTTATCCCATTCTAACTCAAAGCCTGTTGTACTTCATTTGACATCGAATTCTGATGATGAAAGCTGCAGTACTGGAGATTCAAGAACACCATCAAAACCGCTAAAAGGAACTCAAAACTTGATTTCTCGTCGATGGTGCCTCACATGTTTATGTTCATCTGTGACATTGATGAAGAATTATGGGGGCACGACTGAAGCTATTGCAAATACCATGGATGGAAAACCTGTGTGCCGAAATTGTGGAGGAAGTGGTGCCGTACTTTGTGACATGTGCGGTGGTACAGGGAAATGGAAAGCTCTAAATAGAAAACGGGCTAAAGATGTCTATGAGTTTACAGAATGTCCAAATTGTTATGGTAGAGGAAAACTTGTATGCCCTGTTTGTCTAGGAACTGGTTTACCGAACAACAAAGGTCTCCTAAGAAGGCCCGATGCACGACAATTGCTCGATAAGATGTACAACGGTCGCTTATTACCAAATTACTGA

Protein sequence

MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY

Homology

[Close]

BLAST of IVF0006482 vs. ExPASy Swiss-Prot
Match: O64750 (Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSA2 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.4e-53
Identity = 115/190 (60.53%), Postives = 135/190 (71.05%), Query Frame = 0


Query: 1   MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSK---PL 60
           M ASSSHL A+P     S ++P LS  N   V +   S  +++S  + DS + S+     
Sbjct: 1   MAASSSHLFALP-----SPASPFLSAPNRNRVRVLAKSCPENQSFDSNDSDSSSETTHKA 60

Query: 61  KGTQNLISRR-WCLTCLCSSVTLMKN-YGGTTEAIANTMDGKP--VCRNCGGSGAVLCDM 120
           +G Q  +SRR W   C+C+S  L+ N Y   +   A  +D KP   CRNC GSGAVLCDM
Sbjct: 61  QGDQKSVSRRQWMTACVCASAALISNSYTFVSVQSAAALDKKPGGSCRNCQGSGAVLCDM 120

Query: 121 CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLD 180
           CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRP AR+LL+
Sbjct: 121 CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPGARELLE 180

Query: 181 KMYNGRLLPN 184
           KMYNGRLLP+
Sbjct: 181 KMYNGRLLPD 185

[Close]

BLAST of IVF0006482 vs. ExPASy Swiss-Prot
Match: Q6YUA8 (Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PSA2 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-51
Identity = 108/175 (61.71%), Postives = 129/175 (73.71%), Query Frame = 0


Query: 13  LRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTC 72
           +RRP+++  P+ + S+    +   + + D E+CST    T  K  + T    SRR CL C
Sbjct: 19  IRRPAAAHRPAKARSH----ISCCSRHDDAEACSTSKPLTNGKEEEKTTP--SRRKCLAC 78

Query: 73  LCSSVTLMKNYGG---TTEAIANTMDGKP-VCRNCGGSGAVLCDMCGGTGKWKALNRKRA 132
           LC +VTL+   G    T   +A+ M  KP VCRNC GSGAVLCDMCGGTGKWKALNRKRA
Sbjct: 79  LC-AVTLISASGPTMLTPNGLASDMMSKPAVCRNCNGSGAVLCDMCGGTGKWKALNRKRA 138

Query: 133 KDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPN 184
           KDVY FTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDA++LLDKMYNG++LP+
Sbjct: 139 KDVYLFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAKKLLDKMYNGKILPD 186

[Close]

BLAST of IVF0006482 vs. ExPASy Swiss-Prot
Match: A0A1D6KL43 (Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Zea mays OX=4577 GN=PSA2 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-48
Identity = 96/151 (63.58%), Postives = 112/151 (74.17%), Query Frame = 0


Query: 36  LTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLMKNYGGTTEAIANTMD 95
           L  + D + C+       ++  + T +  SRR CL CL  +VTL+   G      A+ M+
Sbjct: 47  LARDEDSKGCANVSKAETNEEKETTPS--SRRRCLVCL-GAVTLISATGPPNGLAADAMN 106

Query: 96  ----GKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVC 155
                K VCRNC GSGAV+CDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVC
Sbjct: 107 KAGVQKAVCRNCNGSGAVICDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVC 166

Query: 156 LGTGLPNNKGLLRRPDARQLLDKMYNGRLLP 183
           LGTGLPNNKGLLRRP+A+QLLDKMYNG++LP
Sbjct: 167 LGTGLPNNKGLLRRPEAKQLLDKMYNGKILP 194

[Close]

BLAST of IVF0006482 vs. ExPASy Swiss-Prot
Match: B5YAR4 (Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-06
Identity = 26/84 (30.95%), Postives = 40/84 (47.62%), Query Frame = 0


Query: 83  YGGTTEAIANTMDGKPVCRNCG---GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPN 142
           +G   E     ++  P C+  G   G+  V CDMC GTG+ + + +       + T CP 
Sbjct: 145 FGSEKEIYVTRLETCPTCKGKGTEPGTNPVKCDMCNGTGQIRNMRQTPFGQFVQITTCPK 204

Query: 143 CYGRGKLV---CPVCLGTGLPNNK 161
           C+G G+++   C  C GTG    K
Sbjct: 205 CHGTGQIIINPCHECHGTGKVRRK 228

[Close]

BLAST of IVF0006482 vs. ExPASy Swiss-Prot
Match: Q7UA76 (Chaperone protein DnaJ OS=Synechococcus sp. (strain WH8102) OX=84588 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 26/74 (35.14%), Postives = 34/74 (45.95%), Query Frame = 0


Query: 100 CRNCGGSGA------VLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLV---CPV 159
           C  CGGSGA        C  CGG G+ +   R       +  ECPNC G G+++   C  
Sbjct: 146 CDTCGGSGAKAGSGPTTCGTCGGAGQVRRATRTPFGSFTQVAECPNCGGTGQVIADPCNA 205

Query: 160 CLGTGLPNNKGLLR 165
           C G G+   +  LR
Sbjct: 206 CGGQGVRQVRKKLR 219

[Close]

BLAST of IVF0006482 vs. ExPASy TrEMBL
Match: A0A1S4DYE8 (protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491567 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.0e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT 60
           MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT
Sbjct: 1   MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT 60

Query: 61  QNLISRRWCLTCLCSSVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKW 120
           QNLISRRWCLTCLCSSVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKW
Sbjct: 61  QNLISRRWCLTCLCSSVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKW 120

Query: 121 KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL 180
           KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL
Sbjct: 121 KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL 180

Query: 181 LPNY 185
           LPNY
Sbjct: 181 LPNY 184

[Close]

BLAST of IVF0006482 vs. ExPASy TrEMBL
Match: A0A0A0KX46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G285690 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 175/184 (95.11%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 2   MASSSHLSAIPLRRPSSSSTPSLSHS-NSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT 61
           MASSSHLSAIPLRRPSSSS PSLSHS N KPVVLH+TSNSDDESCSTGDS+TPSKPLKGT
Sbjct: 1   MASSSHLSAIPLRRPSSSSPPSLSHSANLKPVVLHVTSNSDDESCSTGDSKTPSKPLKGT 60

Query: 62  QNLISRRWCLTCLCSSVTLMKNYGGT-TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGK 121
           Q LISRRWCLTCLCSSVTLMK+YGGT TEAIANTMDGKP CRNCGGSGAVLCDMCGGTGK
Sbjct: 61  QKLISRRWCLTCLCSSVTLMKSYGGTVTEAIANTMDGKPACRNCGGSGAVLCDMCGGTGK 120

Query: 122 WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGR 181
           WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGR
Sbjct: 121 WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGR 180

Query: 182 LLPN 184
           LLPN
Sbjct: 181 LLPN 184

[Close]

BLAST of IVF0006482 vs. ExPASy TrEMBL
Match: A0A1S4DXN8 (protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491567 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 159/164 (96.95%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 21  TPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLM 80
           T +L  +NSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLM
Sbjct: 18  TTNLLPTNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLM 77

Query: 81  KNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNC 140
           KNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNC
Sbjct: 78  KNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNC 137

Query: 141 YGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY 185
           YGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY
Sbjct: 138 YGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY 181

[Close]

BLAST of IVF0006482 vs. ExPASy TrEMBL
Match: A0A5A7TFL6 (Protein EMBRYO SAC DEVELOPMENT ARREST 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00350 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.8e-89
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 27  SNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLMKNYGGT 86
           +NSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLMKNYGGT
Sbjct: 3   ANSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLMKNYGGT 62

Query: 87  TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKL 146
           TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKL
Sbjct: 63  TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKL 122

Query: 147 VCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY 185
           VCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY
Sbjct: 123 VCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY 160

[Close]

BLAST of IVF0006482 vs. ExPASy TrEMBL
Match: A0A1S4DXP4 (protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491567 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 160/169 (94.67%), Postives = 161/169 (95.27%), Query Frame = 0


Query: 16  PSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCS 75
           PS     S   +NSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCS
Sbjct: 2   PSLVRFCSKLEANSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCS 61

Query: 76  SVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFT 135
           SVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFT
Sbjct: 62  SVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFT 121

Query: 136 ECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY 185
           ECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY
Sbjct: 122 ECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY 170

[Close]

BLAST of IVF0006482 vs. NCBI nr
Match: XP_016900745.1 (PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 381 bits (979), Expect = 1.13e-133
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT 60
           MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT
Sbjct: 1   MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT 60

Query: 61  QNLISRRWCLTCLCSSVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKW 120
           QNLISRRWCLTCLCSSVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKW
Sbjct: 61  QNLISRRWCLTCLCSSVTLMKNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKW 120

Query: 121 KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL 180
           KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL
Sbjct: 121 KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL 180

Query: 181 LPNY 184
           LPNY
Sbjct: 181 LPNY 184

[Close]

BLAST of IVF0006482 vs. NCBI nr
Match: XP_011653566.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X2 [Cucumis sativus] >KAE8649480.1 hypothetical protein Csa_018113 [Cucumis sativus])

HSP 1 Score: 359 bits (922), Expect = 5.55e-125
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 2   MASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQ 61
           MASSSHLSAIPLRRPSSSS PSLSHSN KPVVLH+TSNSDDESCSTGDS+TPSKPLKGTQ
Sbjct: 1   MASSSHLSAIPLRRPSSSSPPSLSHSNLKPVVLHVTSNSDDESCSTGDSKTPSKPLKGTQ 60

Query: 62  NLISRRWCLTCLCSSVTLMKNYGGT-TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKW 121
            LISRRWCLTCLCSSVTLMK+YGGT TEAIANTMDGKP CRNCGGSGAVLCDMCGGTGKW
Sbjct: 61  KLISRRWCLTCLCSSVTLMKSYGGTVTEAIANTMDGKPACRNCGGSGAVLCDMCGGTGKW 120

Query: 122 KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL 181
           KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL
Sbjct: 121 KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRL 180

Query: 182 LPN 183
           LPN
Sbjct: 181 LPN 183

[Close]

BLAST of IVF0006482 vs. NCBI nr
Match: XP_004142153.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 355 bits (910), Expect = 3.89e-123
Identity = 175/184 (95.11%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 2   MASSSHLSAIPLRRPSSSSTPSLSHS-NSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT 61
           MASSSHLSAIPLRRPSSSS PSLSHS N KPVVLH+TSNSDDESCSTGDS+TPSKPLKGT
Sbjct: 1   MASSSHLSAIPLRRPSSSSPPSLSHSANLKPVVLHVTSNSDDESCSTGDSKTPSKPLKGT 60

Query: 62  QNLISRRWCLTCLCSSVTLMKNYGGT-TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGK 121
           Q LISRRWCLTCLCSSVTLMK+YGGT TEAIANTMDGKP CRNCGGSGAVLCDMCGGTGK
Sbjct: 61  QKLISRRWCLTCLCSSVTLMKSYGGTVTEAIANTMDGKPACRNCGGSGAVLCDMCGGTGK 120

Query: 122 WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGR 181
           WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGR
Sbjct: 121 WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGR 180

Query: 182 LLPN 183
           LLPN
Sbjct: 181 LLPN 184

[Close]

BLAST of IVF0006482 vs. NCBI nr
Match: XP_038901741.1 (protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 345 bits (886), Expect = 1.71e-119
Identity = 171/184 (92.93%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 1   MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGT 60
           MMASSSHLSAIPLR PSS+STPSL H NSKPVVLH+TS SD ESCSTG S  PSKPLKGT
Sbjct: 1   MMASSSHLSAIPLR-PSSASTPSLYHPNSKPVVLHVTSKSDGESCSTGVSNPPSKPLKGT 60

Query: 61  QNLISRRWCLTCLCSSVTLMKNYGGT-TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGK 120
           QNLISRRWCLTCLCSSVTL+KNYGGT TEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGK
Sbjct: 61  QNLISRRWCLTCLCSSVTLLKNYGGTGTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGK 120

Query: 121 WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGR 180
           WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDAR+LLDKMYNGR
Sbjct: 121 WKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARKLLDKMYNGR 180

Query: 181 LLPN 183
           LLPN
Sbjct: 181 LLPN 183

[Close]

BLAST of IVF0006482 vs. NCBI nr
Match: XP_016900746.1 (PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 337 bits (864), Expect = 3.49e-116
Identity = 159/164 (96.95%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 21  TPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLM 80
           T +L  +NSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLM
Sbjct: 18  TTNLLPTNSKPVVLHLTSNSDDESCSTGDSRTPSKPLKGTQNLISRRWCLTCLCSSVTLM 77

Query: 81  KNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNC 140
           KNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNC
Sbjct: 78  KNYGGTTEAIANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNC 137

Query: 141 YGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY 184
           YGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY
Sbjct: 138 YGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLDKMYNGRLLPNY 181

[Close]

BLAST of IVF0006482 vs. TAIR 10
Match: AT2G34860.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 3.8e-54
Identity = 115/190 (60.53%), Postives = 135/190 (71.05%), Query Frame = 0


Query: 1   MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSK---PL 60
           M ASSSHL A+P     S ++P LS  N   V +   S  +++S  + DS + S+     
Sbjct: 1   MAASSSHLFALP-----SPASPFLSAPNRNRVRVLAKSCPENQSFDSNDSDSSSETTHKA 60

Query: 61  KGTQNLISRR-WCLTCLCSSVTLMKN-YGGTTEAIANTMDGKP--VCRNCGGSGAVLCDM 120
           +G Q  +SRR W   C+C+S  L+ N Y   +   A  +D KP   CRNC GSGAVLCDM
Sbjct: 61  QGDQKSVSRRQWMTACVCASAALISNSYTFVSVQSAAALDKKPGGSCRNCQGSGAVLCDM 120

Query: 121 CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLD 180
           CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRP AR+LL+
Sbjct: 121 CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPGARELLE 180

Query: 181 KMYNGRLLPN 184
           KMYNGRLLP+
Sbjct: 181 KMYNGRLLPD 185

[Close]

BLAST of IVF0006482 vs. TAIR 10
Match: AT2G34860.2 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 3.8e-54
Identity = 115/190 (60.53%), Postives = 135/190 (71.05%), Query Frame = 0


Query: 1   MMASSSHLSAIPLRRPSSSSTPSLSHSNSKPVVLHLTSNSDDESCSTGDSRTPSK---PL 60
           M ASSSHL A+P     S ++P LS  N   V +   S  +++S  + DS + S+     
Sbjct: 1   MAASSSHLFALP-----SPASPFLSAPNRNRVRVLAKSCPENQSFDSNDSDSSSETTHKA 60

Query: 61  KGTQNLISRR-WCLTCLCSSVTLMKN-YGGTTEAIANTMDGKP--VCRNCGGSGAVLCDM 120
           +G Q  +SRR W   C+C+S  L+ N Y   +   A  +D KP   CRNC GSGAVLCDM
Sbjct: 61  QGDQKSVSRRQWMTACVCASAALISNSYTFVSVQSAAALDKKPGGSCRNCQGSGAVLCDM 120

Query: 121 CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPDARQLLD 180
           CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRP AR+LL+
Sbjct: 121 CGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPGARELLE 180

Query: 181 KMYNGRLLPN 184
           KMYNGRLLP+
Sbjct: 181 KMYNGRLLPD 185

[Close]

BLAST of IVF0006482 vs. TAIR 10
Match: AT5G06130.1 (chaperone protein dnaJ-related )

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-05
Identity = 24/67 (35.82%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 97  KPVCRNCGGSGAVLCDMCGGTGKWKALN---RKRAKD----VYEFTECPNCYGRGKLVCP 156
           K  C+ C G+G + C  C  +G   +++   R RA +    V     C NC G GK++CP
Sbjct: 151 KKRCKYCLGTGYLPCARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGKVMCP 210

[Close]

BLAST of IVF0006482 vs. TAIR 10
Match: AT5G06130.2 (chaperone protein dnaJ-related )

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-05
Identity = 24/67 (35.82%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 97  KPVCRNCGGSGAVLCDMCGGTGKWKALN---RKRAKD----VYEFTECPNCYGRGKLVCP 156
           K  C+ C G+G + C  C  +G   +++   R RA +    V     C NC G GK++CP
Sbjct: 235 KKRCKYCLGTGYLPCARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGKVMCP 294

[Close]

BLAST of IVF0006482 vs. TAIR 10
Match: AT5G61670.1 (Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. )

HSP 1 Score: 41.6 bits (96), Expect = 8.1e-04
Identity = 20/64 (31.25%), Postives = 28/64 (43.75%), Query Frame = 0


Query: 100 CRNCGGSGAVLCDMCGGTGKW-------KALNRKRAKDVYEFTECPNCYGRGKLVCPVCL 157
           C+ C G+G + C  C  TG                +    +   C NC G GK++CP CL
Sbjct: 230 CKYCLGTGYLACARCSSTGALVLTEPVSAIAGGNHSLSPPKTERCSNCSGAGKVMCPTCL 289

The following BLAST results are available for this feature:

BLAST of IVF0006482 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64750	5.4e-53	60.53	Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6YUA8	1.3e-51	61.71	Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Oryza sativa subsp. japonica ...	[more]
A0A1D6KL43	2.3e-48	63.58	Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic OS=Zea mays OX=4577 GN=PSA2 PE=2...	[more]
B5YAR4	2.2e-06	30.95	Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 396...	[more]
Q7UA76	1.2e-04	35.14	Chaperone protein DnaJ OS=Synechococcus sp. (strain WH8102) OX=84588 GN=dnaJ PE=...	[more]

BLAST of IVF0006482 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DYE8	1.0e-102	100.00	protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X1 OS=Cucumis mel...	[more]
A0A0A0KX46	1.0e-94	95.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G285690 PE=4 SV=1	[more]
A0A1S4DXN8	1.3e-89	96.95	protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 OS=Cucumis mel...	[more]
A0A5A7TFL6	2.8e-89	99.37	Protein EMBRYO SAC DEVELOPMENT ARREST 3 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S4DXP4	1.4e-88	94.67	protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X3 OS=Cucumis mel...	[more]

BLAST of IVF0006482 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900745.1	1.13e-133	100.00	PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X1 [Cu...	[more]
XP_011653566.1	5.55e-125	95.63	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X2 [Cucumis sativus] >KA...	[more]
XP_004142153.1	3.89e-123	95.11	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1 [Cucumis sativus]	[more]
XP_038901741.1	1.71e-119	92.93	protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Benincasa hispida]	[more]
XP_016900746.1	3.49e-116	96.95	PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 [Cu...	[more]

BLAST of IVF0006482 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34860.1	3.8e-54	60.53	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT2G34860.2	3.8e-54	60.53	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT5G06130.1	9.5e-05	35.82	chaperone protein dnaJ-related	[more]
AT5G06130.2	9.5e-05	35.82	chaperone protein dnaJ-related	[more]
AT5G61670.1	8.1e-04	31.25	Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 20..183
None	No IPR available	PANTHER	PTHR15852:SF56	PROTEIN PHOTOSYSTEM I ASSEMBLY 2, CHLOROPLASTIC	coord: 20..183
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 99..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006482.1	IVF0006482.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0047134	protein-disulfide reductase (NAD(P)) activity