Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGTTCATTCAGAATATGTCGTTCCGTGGAACGGGTGAATCTTATGAGAAGGGGTCAGACTCAGCCTTTGTTCTATCTGTTGTTTCATCATTTTTCTTGCTGCACCTCTGGAGTTCCTTTTGTTCTTTTTTTTTTTTCTTTTTAATATTTGTCCAGGTATGGTGTTATTTCCAGGCTACTTAGCCGGCTTATACCACAGAGAAATCATTATAAGGTATGCTCTTTTACCATCTTCCAATAATTTCCACACTTTTGCCGTTTCTTTTCTCAATCAAAATTGTTCTTGAGAATTCTATTGACTATAACTTTATGTGAATAGTTACTGACTTTAGAATGAACCTGATTCTCCACAGTTTAATAATAACTTGGAAAAAATACAAAAGTTGCGTGGAAGGTGCTATCCAAGGCTTGATTATGAGCATCATTTGAATAATAGTTTATCACCTTGTCGTTTGAATAATTCAAGAGGAAGATCTTCTTTTCATTCTGATTTCTCTACCAATAGCAATGACAACAATTTCCAAGTTAAGTACAGAACCAAGGAGTTCGACTGCGATGTAGACAGAAAAATGACTTTGCTGGATGTCAATGGTTCACCTCTCACCGCTGCCGTTGAAAACTATAGATCATTTATTTCCAGCCTTTTCAATCCGCAATATAGTTTATATGATCAAGATGAACATTTGCACCTAAGAAAGCAAAAGCTAGAACCTCTTCTGCTTGGTTGGGATACTGACTACATAAAAGATGAAAGTTCTTCTCAACTTACAGAGTTGAACACATTTGCCAAGTCACCAATTTCATTCGCTGATGATCATCAGCCAACCTTGCACGAGAGTTTTGGTGCTGTTGCGCTGTGTTCATCCCCTTTCCCTTCCAGTAATCGTATAAACTTCAACTCATTGCCATACTCCAATTTAGCCAGCTATCAAATCCAAGGATTAAGTTGGCAAAATGTATCAAAGGAGGAAGATATTGATGCCACTTTCAACAACCTGCATTTGAATTTCTCATCAGTACCCAAATGTCTTCATCAATGCAATAGCTATGTTGATGACGGAGGCTGTCATGACTTGTGTGCACAAAACGCTGATTGGGTTATGAATAATGTGGTGAATGACGAATCCCAACATCCTTCTGTTGAAAGTCTGTGTGCTTCTGGCCTTGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAACAATGCCAAACATCTTATCATATACTTAAGTACCCACTGGATGAAATACAACCCACAGCCCTAATCAATGAAGAATGGAGTAATGACAGTTCAGATGATGTGCTTGTGGATTATGGACCGCCCTTCTATATCCAACCCGAGTCATTCTTTCAAGAAGGGAAGGTATACTCTGTATTGACTGATAAACTTAGCTGCTGGGATGTAGTCAGAAGTGAAATAAATGTTGATGATATAACTGAAATGAATTACAAATGATAGCAGCTTCAATTTTTAATGACCCTCTATGCTTAATCCTGTGTCCTCTTTTGGCCTATCTTTTTATTTTACATTGTGGGGTAAAGAGAGATGGAGATTTCTGGCTAGAAGATCATTTCCACTAACATAATTGGGGAGAGGCGGAGGTTGCTTGGTTGAGAGAGAACTCAACATGATTTTCTTGGTGGAGAATGAATGAAATAAACTGTCAGGTAGATTTTTCAGGCTTGGATGAAAAATCATTTCAAAGAGCTTCAAGTTGTGTTGTAAACAAAAAGATTCTTGGATTGAGTCATTTCTTGAGAAAACCACTCTTATACATCCTGTCCACATATTGCTTTTTAGTTGTTGCATTTGGATGAAAATGGTATTTGGAAGTCATGGGAACACAGTGCATTTTAGTGAAGCTAAATGATCTGAAGCCGAGCATAGTTTTGTGTATAAAGACATCAATTGCCATCGTTTGTTTGTCAGAAGAAGAGGGTTGGTTAATTGAACAAGTGACAACCACCTAAGAGGCCCTGCCTAGGCCAACTGCTCAACCTGCCATTGATACCTACCCGAGTCCTTTGGAAAATGTATGAATTTTTTTTAATCCTTATAGTCG
mRNA sequence
CAGTTCATTCAGAATATGTCGTTCCGTGGAACGGGTGAATCTTATGAGAAGGGGTCAGACTCAGCCTTTGTTCTATCTGTTGTTTCATCATTTTTCTTGCTGCACCTCTGGAGTTCCTTTTGTTCTTTTTTTTTTTTCTTTTTAATATTTGTCCAGGTATGGTGTTATTTCCAGGCTACTTAGCCGGCTTATACCACAGAGAAATCATTATAAGTTTAATAATAACTTGGAAAAAATACAAAAGTTGCGTGGAAGGTGCTATCCAAGGCTTGATTATGAGCATCATTTGAATAATAGTTTATCACCTTGTCGTTTGAATAATTCAAGAGGAAGATCTTCTTTTCATTCTGATTTCTCTACCAATAGCAATGACAACAATTTCCAAGTTAAGTACAGAACCAAGGAGTTCGACTGCGATGTAGACAGAAAAATGACTTTGCTGGATGTCAATGGTTCACCTCTCACCGCTGCCGTTGAAAACTATAGATCATTTATTTCCAGCCTTTTCAATCCGCAATATAGTTTATATGATCAAGATGAACATTTGCACCTAAGAAAGCAAAAGCTAGAACCTCTTCTGCTTGGTTGGGATACTGACTACATAAAAGATGAAAGTTCTTCTCAACTTACAGAGTTGAACACATTTGCCAAGTCACCAATTTCATTCGCTGATGATCATCAGCCAACCTTGCACGAGAGTTTTGGTGCTGTTGCGCTGTGTTCATCCCCTTTCCCTTCCAGTAATCGTATAAACTTCAACTCATTGCCATACTCCAATTTAGCCAGCTATCAAATCCAAGGATTAAGTTGGCAAAATGTATCAAAGGAGGAAGATATTGATGCCACTTTCAACAACCTGCATTTGAATTTCTCATCAGTACCCAAATGTCTTCATCAATGCAATAGCTATGTTGATGACGGAGGCTGTCATGACTTGTGTGCACAAAACGCTGATTGGGTTATGAATAATGTGGTGAATGACGAATCCCAACATCCTTCTGTTGAAAGTCTGTGTGCTTCTGGCCTTGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAACAATGCCAAACATCTTATCATATACTTAAGTACCCACTGGATGAAATACAACCCACAGCCCTAATCAATGAAGAATGGAGTAATGACAGTTCAGATGATGTGCTTGTGGATTATGGACCGCCCTTCTATATCCAACCCGAGTCATTCTTTCAAGAAGGGAAGGTATACTCTGTATTGACTGATAAACTTAGCTGCTGGGATGTAGTCAGAAGTGAAATAAATGTTGATGATATAACTGAAATGAATTACAAATGATAGCAGCTTCAATTTTTAATGACCCTCTATGCTTAATCCTGTGTCCTCTTTTGGCCTATCTTTTTATTTTACATTGTGGGGTAAAGAGAGATGGAGATTTCTGGCTAGAAGATCATTTCCACTAACATAATTGGGGAGAGGCGGAGGTTGCTTGGTTGAGAGAGAACTCAACATGATTTTCTTGGTGGAGAATGAATGAAATAAACTGTCAGGTAGATTTTTCAGGCTTGGATGAAAAATCATTTCAAAGAGCTTCAAGTTGTGTTGTAAACAAAAAGATTCTTGGATTGAGTCATTTCTTGAGAAAACCACTCTTATACATCCTGTCCACATATTGCTTTTTAGTTGTTGCATTTGGATGAAAATGGTATTTGGAAGTCATGGGAACACAGTGCATTTTAGTGAAGCTAAATGATCTGAAGCCGAGCATAGTTTTGTGTATAAAGACATCAATTGCCATCGTTTGTTTGTCAGAAGAAGAGGGTTGGTTAATTGAACAAGTGACAACCACCTAAGAGGCCCTGCCTAGGCCAACTGCTCAACCTGCCATTGATACCTACCCGAGTCCTTTGGAAAATGTATGAATTTTTTTTAATCCTTATAGTCG
Coding sequence (CDS)
ATGACTTTGCTGGATGTCAATGGTTCACCTCTCACCGCTGCCGTTGAAAACTATAGATCATTTATTTCCAGCCTTTTCAATCCGCAATATAGTTTATATGATCAAGATGAACATTTGCACCTAAGAAAGCAAAAGCTAGAACCTCTTCTGCTTGGTTGGGATACTGACTACATAAAAGATGAAAGTTCTTCTCAACTTACAGAGTTGAACACATTTGCCAAGTCACCAATTTCATTCGCTGATGATCATCAGCCAACCTTGCACGAGAGTTTTGGTGCTGTTGCGCTGTGTTCATCCCCTTTCCCTTCCAGTAATCGTATAAACTTCAACTCATTGCCATACTCCAATTTAGCCAGCTATCAAATCCAAGGATTAAGTTGGCAAAATGTATCAAAGGAGGAAGATATTGATGCCACTTTCAACAACCTGCATTTGAATTTCTCATCAGTACCCAAATGTCTTCATCAATGCAATAGCTATGTTGATGACGGAGGCTGTCATGACTTGTGTGCACAAAACGCTGATTGGGTTATGAATAATGTGGTGAATGACGAATCCCAACATCCTTCTGTTGAAAGTCTGTGTGCTTCTGGCCTTGTCTTTGATTTTGGATGGAAATACCTCTCAGGCTCAAAGGAACAATGCCAAACATCTTATCATATACTTAAGTACCCACTGGATGAAATACAACCCACAGCCCTAATCAATGAAGAATGGAGTAATGACAGTTCAGATGATGTGCTTGTGGATTATGGACCGCCCTTCTATATCCAACCCGAGTCATTCTTTCAAGAAGGGAAGGTATACTCTGTATTGACTGATAAACTTAGCTGCTGGGATGTAGTCAGAAGTGAAATAAATGTTGATGATATAACTGAAATGAATTACAAATGA
Protein sequence
MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKDESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASYQIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNNVVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWSNDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK
Homology
BLAST of IVF0006114 vs. ExPASy TrEMBL
Match:
A0A5A7U8Y2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00890 PE=4 SV=1)
HSP 1 Score: 622.9 bits (1605), Expect = 7.1e-175
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD
Sbjct: 215 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 274
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY
Sbjct: 275 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 334
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 180
QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN
Sbjct: 335 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 394
Query: 181 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 240
VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS
Sbjct: 395 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 454
Query: 241 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK 298
NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK
Sbjct: 455 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK 511
BLAST of IVF0006114 vs. ExPASy TrEMBL
Match:
A0A1S3CFT3 (uncharacterized protein LOC103500465 OS=Cucumis melo OX=3656 GN=LOC103500465 PE=4 SV=1)
HSP 1 Score: 622.9 bits (1605), Expect = 7.1e-175
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD
Sbjct: 279 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 338
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY
Sbjct: 339 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 398
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 180
QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN
Sbjct: 399 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 458
Query: 181 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 240
VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS
Sbjct: 459 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 518
Query: 241 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK 298
NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK
Sbjct: 519 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK 575
BLAST of IVF0006114 vs. ExPASy TrEMBL
Match:
A0A0A0K889 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G329370 PE=4 SV=1)
HSP 1 Score: 498.0 bits (1281), Expect = 2.6e-137
Identity = 252/296 (85.14%), Postives = 263/296 (88.85%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLL+V TAAVENYRSFISSLF PQY LYDQDEH HLRKQKL+PLLLGWDTDYIKD
Sbjct: 1 MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLKPLLLGWDTDYIKD 60
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
ESSSQLTELNT AKSPISFADD QPT+HESFGA LCSSPFPSSNR N NSLPYS+LAS
Sbjct: 61 ESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSPFPSSNRTNLNSLPYSSLASS 120
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 180
QI GLSWQNV+ EDI TFNNLHLNFSSVPK LHQ NS VDDGGCHDLCAQN DWVMNN
Sbjct: 121 QIHGLSWQNVA-GEDIGTTFNNLHLNFSSVPKFLHQWNSSVDDGGCHDLCAQNTDWVMNN 180
Query: 181 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 240
V++D SQHPS+ESLCASGLVFDFG KYLS SKEQ QT+YHILKYPLDEIQPTAL NEEWS
Sbjct: 181 VLDDGSQHPSIESLCASGLVFDFGCKYLSDSKEQRQTAYHILKYPLDEIQPTALTNEEWS 240
Query: 241 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNY 297
NDSSDDVLVDY PPF+IQPESFFQ GKVYS+LTDKLS WDV RSEINVDDITEMNY
Sbjct: 241 NDSSDDVLVDYRPPFFIQPESFFQ-GKVYSILTDKLS-WDVARSEINVDDITEMNY 287
BLAST of IVF0006114 vs. ExPASy TrEMBL
Match:
A0A6J1GQM4 (uncharacterized protein LOC111456585 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111456585 PE=4 SV=1)
HSP 1 Score: 421.8 bits (1083), Expect = 2.4e-114
Identity = 211/297 (71.04%), Postives = 245/297 (82.49%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLLD N SP TAAVENYR IS+LFN QY YDQ E LH+RKQ++EPLLLGWDTD IKD
Sbjct: 190 MTLLDANSSPSTAAVENYRPLISTLFNQQYGFYDQGEPLHIRKQEMEPLLLGWDTDDIKD 249
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
+ SS+ TE +TFA+ PISFADDHQP LHESFGAVALCSSPFPSSN + SLPYS+LASY
Sbjct: 250 D-SSKFTEFHTFAEPPISFADDHQPNLHESFGAVALCSSPFPSSNHRDLYSLPYSSLASY 309
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGG-CHDLCAQNADWVMN 180
QI GLS NV KEE IDAT NN+HLNFSSVPKCL QC++YVDD G C CAQ+A+W MN
Sbjct: 310 QIHGLSRPNVEKEEGIDATLNNVHLNFSSVPKCLSQCDNYVDDRGICGFFCAQSANWHMN 369
Query: 181 NVVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEW 240
++DE ++PS++S+CASG VFDFGWKYLSGSKE CQT+YH+L+YPLDE++PT+ +NEE
Sbjct: 370 YALDDEHRYPSLDSMCASGFVFDFGWKYLSGSKEHCQTAYHLLEYPLDEMRPTSPVNEEC 429
Query: 241 SNDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNY 297
+ DSS +YG PF+IQPESFFQEGKV S+LTDKLS WDV RSEINV ITEM+Y
Sbjct: 430 NIDSS-----EYGQPFFIQPESFFQEGKVRSLLTDKLS-WDVTRSEINV-AITEMDY 478
BLAST of IVF0006114 vs. ExPASy TrEMBL
Match:
A0A6J1GQP2 (uncharacterized protein LOC111456585 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456585 PE=4 SV=1)
HSP 1 Score: 421.8 bits (1083), Expect = 2.4e-114
Identity = 211/297 (71.04%), Postives = 245/297 (82.49%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLLD N SP TAAVENYR IS+LFN QY YDQ E LH+RKQ++EPLLLGWDTD IKD
Sbjct: 312 MTLLDANSSPSTAAVENYRPLISTLFNQQYGFYDQGEPLHIRKQEMEPLLLGWDTDDIKD 371
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
+ SS+ TE +TFA+ PISFADDHQP LHESFGAVALCSSPFPSSN + SLPYS+LASY
Sbjct: 372 D-SSKFTEFHTFAEPPISFADDHQPNLHESFGAVALCSSPFPSSNHRDLYSLPYSSLASY 431
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGG-CHDLCAQNADWVMN 180
QI GLS NV KEE IDAT NN+HLNFSSVPKCL QC++YVDD G C CAQ+A+W MN
Sbjct: 432 QIHGLSRPNVEKEEGIDATLNNVHLNFSSVPKCLSQCDNYVDDRGICGFFCAQSANWHMN 491
Query: 181 NVVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEW 240
++DE ++PS++S+CASG VFDFGWKYLSGSKE CQT+YH+L+YPLDE++PT+ +NEE
Sbjct: 492 YALDDEHRYPSLDSMCASGFVFDFGWKYLSGSKEHCQTAYHLLEYPLDEMRPTSPVNEEC 551
Query: 241 SNDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNY 297
+ DSS +YG PF+IQPESFFQEGKV S+LTDKLS WDV RSEINV ITEM+Y
Sbjct: 552 NIDSS-----EYGQPFFIQPESFFQEGKVRSLLTDKLS-WDVTRSEINV-AITEMDY 600
BLAST of IVF0006114 vs. NCBI nr
Match:
KAA0050636.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK07797.1 reverse transcriptase [Cucumis melo var. makuwa])
HSP 1 Score: 620 bits (1600), Expect = 3.61e-221
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD
Sbjct: 215 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 274
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY
Sbjct: 275 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 334
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 180
QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN
Sbjct: 335 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 394
Query: 181 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 240
VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS
Sbjct: 395 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 454
Query: 241 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK 297
NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK
Sbjct: 455 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK 511
BLAST of IVF0006114 vs. NCBI nr
Match:
XP_008461985.1 (PREDICTED: uncharacterized protein LOC103500465 [Cucumis melo])
HSP 1 Score: 620 bits (1600), Expect = 3.46e-220
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD
Sbjct: 279 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 338
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY
Sbjct: 339 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 398
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 180
QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN
Sbjct: 399 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 458
Query: 181 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 240
VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS
Sbjct: 459 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 518
Query: 241 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK 297
NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK
Sbjct: 519 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNYK 575
BLAST of IVF0006114 vs. NCBI nr
Match:
XP_011659159.1 (uncharacterized protein LOC101207408 [Cucumis sativus])
HSP 1 Score: 496 bits (1278), Expect = 2.03e-171
Identity = 252/296 (85.14%), Postives = 263/296 (88.85%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLL+V TAAVENYRSFISSLF PQY LYDQDEH HLRKQKL+PLLLGWDTDYIKD
Sbjct: 279 MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLKPLLLGWDTDYIKD 338
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
ESSSQLTELNT AKSPISFADD QPT+HESFGA LCSSPFPSSNR N NSLPYS+LAS
Sbjct: 339 ESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSPFPSSNRTNLNSLPYSSLASS 398
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 180
QI GLSWQNV+ E DI TFNNLHLNFSSVPK LHQ NS VDDGGCHDLCAQN DWVMNN
Sbjct: 399 QIHGLSWQNVAGE-DIGTTFNNLHLNFSSVPKFLHQWNSSVDDGGCHDLCAQNTDWVMNN 458
Query: 181 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 240
V++D SQHPS+ESLCASGLVFDFG KYLS SKEQ QT+YHILKYPLDEIQPTAL NEEWS
Sbjct: 459 VLDDGSQHPSIESLCASGLVFDFGCKYLSDSKEQRQTAYHILKYPLDEIQPTALTNEEWS 518
Query: 241 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNY 296
NDSSDDVLVDY PPF+IQPESFFQ GKVYS+LTDKLS WDV RSEINVDDITEMNY
Sbjct: 519 NDSSDDVLVDYRPPFFIQPESFFQ-GKVYSILTDKLS-WDVARSEINVDDITEMNY 565
BLAST of IVF0006114 vs. NCBI nr
Match:
KAE8646221.1 (hypothetical protein Csa_016557 [Cucumis sativus])
HSP 1 Score: 496 bits (1278), Expect = 3.22e-171
Identity = 252/296 (85.14%), Postives = 263/296 (88.85%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLL+V TAAVENYRSFISSLF PQY LYDQDEH HLRKQKL+PLLLGWDTDYIKD
Sbjct: 293 MTLLNV-----TAAVENYRSFISSLFKPQYGLYDQDEHFHLRKQKLKPLLLGWDTDYIKD 352
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
ESSSQLTELNT AKSPISFADD QPT+HESFGA LCSSPFPSSNR N NSLPYS+LAS
Sbjct: 353 ESSSQLTELNTIAKSPISFADD-QPTMHESFGAAPLCSSPFPSSNRTNLNSLPYSSLASS 412
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGGCHDLCAQNADWVMNN 180
QI GLSWQNV+ E DI TFNNLHLNFSSVPK LHQ NS VDDGGCHDLCAQN DWVMNN
Sbjct: 413 QIHGLSWQNVAGE-DIGTTFNNLHLNFSSVPKFLHQWNSSVDDGGCHDLCAQNTDWVMNN 472
Query: 181 VVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEWS 240
V++D SQHPS+ESLCASGLVFDFG KYLS SKEQ QT+YHILKYPLDEIQPTAL NEEWS
Sbjct: 473 VLDDGSQHPSIESLCASGLVFDFGCKYLSDSKEQRQTAYHILKYPLDEIQPTALTNEEWS 532
Query: 241 NDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNY 296
NDSSDDVLVDY PPF+IQPESFFQ GKVYS+LTDKLS WDV RSEINVDDITEMNY
Sbjct: 533 NDSSDDVLVDYRPPFFIQPESFFQ-GKVYSILTDKLS-WDVARSEINVDDITEMNY 579
BLAST of IVF0006114 vs. NCBI nr
Match:
XP_022954292.1 (uncharacterized protein LOC111456585 isoform X5 [Cucurbita moschata])
HSP 1 Score: 420 bits (1079), Expect = 1.72e-142
Identity = 211/297 (71.04%), Postives = 245/297 (82.49%), Query Frame = 0
Query: 1 MTLLDVNGSPLTAAVENYRSFISSLFNPQYSLYDQDEHLHLRKQKLEPLLLGWDTDYIKD 60
MTLLD N SP TAAVENYR IS+LFN QY YDQ E LH+RKQ++EPLLLGWDTD IKD
Sbjct: 190 MTLLDANSSPSTAAVENYRPLISTLFNQQYGFYDQGEPLHIRKQEMEPLLLGWDTDDIKD 249
Query: 61 ESSSQLTELNTFAKSPISFADDHQPTLHESFGAVALCSSPFPSSNRINFNSLPYSNLASY 120
+SS + TE +TFA+ PISFADDHQP LHESFGAVALCSSPFPSSN + SLPYS+LASY
Sbjct: 250 DSS-KFTEFHTFAEPPISFADDHQPNLHESFGAVALCSSPFPSSNHRDLYSLPYSSLASY 309
Query: 121 QIQGLSWQNVSKEEDIDATFNNLHLNFSSVPKCLHQCNSYVDDGG-CHDLCAQNADWVMN 180
QI GLS NV KEE IDAT NN+HLNFSSVPKCL QC++YVDD G C CAQ+A+W MN
Sbjct: 310 QIHGLSRPNVEKEEGIDATLNNVHLNFSSVPKCLSQCDNYVDDRGICGFFCAQSANWHMN 369
Query: 181 NVVNDESQHPSVESLCASGLVFDFGWKYLSGSKEQCQTSYHILKYPLDEIQPTALINEEW 240
++DE ++PS++S+CASG VFDFGWKYLSGSKE CQT+YH+L+YPLDE++PT+ +NEE
Sbjct: 370 YALDDEHRYPSLDSMCASGFVFDFGWKYLSGSKEHCQTAYHLLEYPLDEMRPTSPVNEEC 429
Query: 241 SNDSSDDVLVDYGPPFYIQPESFFQEGKVYSVLTDKLSCWDVVRSEINVDDITEMNY 296
+ DSS +YG PF+IQPESFFQEGKV S+LTDKLS WDV RSEINV ITEM+Y
Sbjct: 430 NIDSS-----EYGQPFFIQPESFFQEGKVRSLLTDKLS-WDVTRSEINVA-ITEMDY 478
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U8Y2 | 7.1e-175 | 100.00 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold17... | [more] |
A0A1S3CFT3 | 7.1e-175 | 100.00 | uncharacterized protein LOC103500465 OS=Cucumis melo OX=3656 GN=LOC103500465 PE=... | [more] |
A0A0A0K889 | 2.6e-137 | 85.14 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G329370 PE=4 SV=1 | [more] |
A0A6J1GQM4 | 2.4e-114 | 71.04 | uncharacterized protein LOC111456585 isoform X5 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1GQP2 | 2.4e-114 | 71.04 | uncharacterized protein LOC111456585 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |
KAA0050636.1 | 3.61e-221 | 100.00 | reverse transcriptase [Cucumis melo var. makuwa] >TYK07797.1 reverse transcripta... | [more] |
XP_008461985.1 | 3.46e-220 | 100.00 | PREDICTED: uncharacterized protein LOC103500465 [Cucumis melo] | [more] |
XP_011659159.1 | 2.03e-171 | 85.14 | uncharacterized protein LOC101207408 [Cucumis sativus] | [more] |
KAE8646221.1 | 3.22e-171 | 85.14 | hypothetical protein Csa_016557 [Cucumis sativus] | [more] |
XP_022954292.1 | 1.72e-142 | 71.04 | uncharacterized protein LOC111456585 isoform X5 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |