IVF0005995 (gene) Melon (IVF77) v1

Overview
NameIVF0005995
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlutamic acid-rich protein-like
Locationchr01: 3660115 .. 3661696 (+)
RNA-Seq ExpressionIVF0005995
SyntenyIVF0005995
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTAGCTTCTTCCCCCTTTAGTTTCTTAAGCACTTCTTCACATTCCCTATTGAGAAGCTATTTCCATGGCCACCGTTGAGGTATCTCAATAATATTCTTTCACTTTTTTACTTTCTTTACGATTTGAATATGCATCATGTTTTTAAATCTTTTCGTTTTGCAAGAGGAAAAGATATTATTCATTAGGTTGTCCAAATTAATGTACGTGTATAAACCACACTTCATAATACTCATTGGACATAGAATTAAAAAGTTTGCATACCCTAATAATTACAAAGTAATAACAACCTCATCGAATAATTTTTCCACAGAAAGAAGGGTGCAATTGCCTCTTTTTTCTTAATTGATTTATGGGTTTGTTTTCAGGAAATATATTTAGATCTTGGGACTTAGAAAATGAACCTTTCGAAAATATAGCATGTGAAATACATATTGAAAAAAGAGTGAAAACATATGTATCACCGCTCTGACTTTTTTCTTTTTTTTAACCATCATATGTGTTTGACCTATTGGTAAATAAAAACACGACGGTTATGAATGATTACGAGGTTACGAGTTAAGTATGTTTGGTAATCAATTACTTAGTTAGAATTTAATATCTTACTAATTTTATTGACAATCAAATGTCTTAGGATCAAATGAGTTGTCTTATAAAAATAGTCAAGTATATCAATAATTAAGTTGATCTAGACACTCGTGGTTATGTTAAAAACAACTATGATCTTTTATTTTTATTTTCAATTAACCTATTTTCTTTTTGCTAATAAAAGATTAAATTTATAGTTAGTTAAAAAGTAAAAAAATTAATTGATTGATAATTTTAACTATGATATATGATATTAGATAGCAATAATAATTATAGTAGCAAGCTTTTCTTTTCCTTTTAAGTTTCTTAGCTTCGTCTCTTATAAGAAATTACTATGATAACTTGAAGACCGTATCTCCGAATGCTGTTCTCTTAGAAGATACGACGATTGTTAAAGAGACGAACGCAAAAGAAGAAGTTGAGGAACAATCGTCACCAAACATCACATCAAAAGAGAAGGTAGAGGAAAAAGAAGAGAGTGTTAAAGTTGAAGTTGTTGATGAAAGATCGTCAGATGATTATTCAGAAGCCGTTGTTTCAAATGAAAAAGTTGAAGCAACGGCTGATCAAGAGGAGGAGGAGGAGGAGGAAGAAGATGAGGTTGTTATCCTAACAGATGATGACGAGGTCGAGGAATATTTAGAATCTAAAGAAGCTGCAGAAGTAGCCAAGGAAGAAAACGACAAACCCGACGAGCCATCAGTCGTAGCGGAAGCCAAAGCTTTAGTATCAGAGGAGGCAGAGGAAAAAGATGAGAAGAAAGAAGCACGAGAGGAGAAGAAAGAGTAAGGAAATATGGGAAGAAATTAGGGAATATGCATGCGATGGGATGTAGAGTTGTGGGTTACGTTAAAATAATATTTGTTAGTGTGTGGAATGTCTGGAAATTTGGAATTACCCACCTAAAGAGTCTCTTGACACGTGTCATCATCGACGTGGCAAATAAAGTGTTGGTTTGCTTTTGGTTGTGTAATGCTATAAGGGTAAGATTGGGG

mRNA sequence

CTTTAGCTTCTTCCCCCTTTAGTTTCTTAAGCACTTCTTCACATTCCCTATTGAGAAGCTATTTCCATGGCCACCGTTGAGACCGTATCTCCGAATGCTGTTCTCTTAGAAGATACGACGATTGTTAAAGAGACGAACGCAAAAGAAGAAGTTGAGGAACAATCGTCACCAAACATCACATCAAAAGAGAAGGTAGAGGAAAAAGAAGAGAGTGTTAAAGTTGAAGTTGTTGATGAAAGATCGTCAGATGATTATTCAGAAGCCGTTGTTTCAAATGAAAAAGTTGAAGCAACGGCTGATCAAGAGGAGGAGGAGGAGGAGGAAGAAGATGAGGTTGTTATCCTAACAGATGATGACGAGGTCGAGGAATATTTAGAATCTAAAGAAGCTGCAGAAGTAGCCAAGGAAGAAAACGACAAACCCGACGAGCCATCAGTCGTAGCGGAAGCCAAAGCTTTAGTATCAGAGGAGGCAGAGGAAAAAGATGAGAAGAAAGAAGCACGAGAGGAGAAGAAAGAGTAAGGAAATATGGGAAGAAATTAGGGAATATGCATGCGATGGGATGTAGAGTTGTGGGTTACGTTAAAATAATATTTGTTAGTGTGTGGAATGTCTGGAAATTTGGAATTACCCACCTAAAGAGTCTCTTGACACGTGTCATCATCGACGTGGCAAATAAAGTGTTGGTTTGCTTTTGGTTGTGTAATGCTATAAGGGTAAGATTGGGG

Coding sequence (CDS)

ATGGCCACCGTTGAGACCGTATCTCCGAATGCTGTTCTCTTAGAAGATACGACGATTGTTAAAGAGACGAACGCAAAAGAAGAAGTTGAGGAACAATCGTCACCAAACATCACATCAAAAGAGAAGGTAGAGGAAAAAGAAGAGAGTGTTAAAGTTGAAGTTGTTGATGAAAGATCGTCAGATGATTATTCAGAAGCCGTTGTTTCAAATGAAAAAGTTGAAGCAACGGCTGATCAAGAGGAGGAGGAGGAGGAGGAAGAAGATGAGGTTGTTATCCTAACAGATGATGACGAGGTCGAGGAATATTTAGAATCTAAAGAAGCTGCAGAAGTAGCCAAGGAAGAAAACGACAAACCCGACGAGCCATCAGTCGTAGCGGAAGCCAAAGCTTTAGTATCAGAGGAGGCAGAGGAAAAAGATGAGAAGAAAGAAGCACGAGAGGAGAAGAAAGAGTAA

Protein sequence

MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSSDDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPDEPSVVAEAKALVSEEAEEKDEKKEAREEKKE
Homology
BLAST of IVF0005995 vs. ExPASy TrEMBL
Match: A0A5A7UTC3 (Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00150 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.9e-59
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0

Query: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60
           MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS
Sbjct: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60

Query: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120
           DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD
Sbjct: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120

Query: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 152
           EPSVVAEAKALVSEEAEEKDEKKEAREEKKE
Sbjct: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151

BLAST of IVF0005995 vs. ExPASy TrEMBL
Match: A0A1S3C185 (glutamic acid-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103495666 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0

Query: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60
           MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS
Sbjct: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60

Query: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120
           DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAA VAKEENDKPD
Sbjct: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAGVAKEENDKPD 120

Query: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 152
           EPSVVAEAKALVSEEAEEKDEKKEAREEKKE
Sbjct: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151

BLAST of IVF0005995 vs. ExPASy TrEMBL
Match: A0A0A0K197 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037490 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 126/153 (82.35%), Postives = 132/153 (86.27%), Query Frame = 0

Query: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKV-EVVDERS 60
           MATVE VSPNA LLEDTT VKET  KEEVEEQSSP+ TSKE VEEKEESVKV EVVDE+S
Sbjct: 1   MATVEIVSPNATLLEDTTTVKETVTKEEVEEQSSPDTTSKENVEEKEESVKVDEVVDEKS 60

Query: 61  SDDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKP 120
           SDD SEAVV NEKVEATA    EEEEEEDEVVILTDDDEVEE   ++EAAEVAKEENDKP
Sbjct: 61  SDD-SEAVVPNEKVEATA----EEEEEEDEVVILTDDDEVEELEYNEEAAEVAKEENDKP 120

Query: 121 DEPSVVAEAKALVSEEAEEKDEKK-EAREEKKE 152
           DE SVV EAKA+VSEEAEE+DEKK EA EEKKE
Sbjct: 121 DESSVVPEAKAVVSEEAEEEDEKKDEAAEEKKE 148

BLAST of IVF0005995 vs. ExPASy TrEMBL
Match: A0A6J1HYF7 (glutamic acid-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111468066 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 86/147 (58.50%), Postives = 108/147 (73.47%), Query Frame = 0

Query: 5   ETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSSDDYS 64
           +T+SPNA LLE+T ++KET AKEEVEE + P +T +EK  EKEESV+VE V E     +S
Sbjct: 9   KTISPNAALLEETNVLKETAAKEEVEEPAQPAVTPEEKA-EKEESVEVETVAE---PPHS 68

Query: 65  EAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPDEPSV 124
           +A V NEKVEAT ++EEE EEEE+EVVILTD+ E EE  E +  AEVAKEE+D P+E S 
Sbjct: 69  KAGVLNEKVEAT-EEEEEVEEEEEEVVILTDESEAEE--EPEAVAEVAKEESDSPNESS- 128

Query: 125 VAEAKALVSEEAEEKDEKKEAREEKKE 152
             EA    ++EA+E+DEKKEA  EK E
Sbjct: 129 APEADTPAAKEAKEEDEKKEAPAEKTE 147

BLAST of IVF0005995 vs. ExPASy TrEMBL
Match: A0A6J1EXC5 (X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437032 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.2e-06
Identity = 72/151 (47.68%), Postives = 82/151 (54.30%), Query Frame = 0

Query: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60
           MA VE V P   L E+  IV E  A  E            EK EE EESV+VEV      
Sbjct: 1   MAAVEPVPPTTALPEEAAIVNEEAAAPE------------EKAEE-EESVEVEV------ 60

Query: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120
                           A +EEEEEEEE+EVVIL+D++   E LES   AEVAKEEND  D
Sbjct: 61  ----------------AAKEEEEEEEEEEVVILSDEEGAAEELESLSIAEVAKEENDGSD 115

Query: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 152
           EPS   EA+A V EE +E+DEKKE  EEK E
Sbjct: 121 EPS-APEAEAPVEEEGKEEDEKKEVSEEKTE 115

BLAST of IVF0005995 vs. NCBI nr
Match: KAA0059152.1 (glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK02536.1 glutamic acid-rich protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (610), Expect = 1.71e-78
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0

Query: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60
           MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS
Sbjct: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60

Query: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120
           DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD
Sbjct: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120

Query: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151
           EPSVVAEAKALVSEEAEEKDEKKEAREEKKE
Sbjct: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151

BLAST of IVF0005995 vs. NCBI nr
Match: XP_008455514.1 (PREDICTED: glutamic acid-rich protein-like [Cucumis melo])

HSP 1 Score: 236 bits (603), Expect = 1.99e-77
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0

Query: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60
           MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS
Sbjct: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60

Query: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120
           DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAA VAKEENDKPD
Sbjct: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAGVAKEENDKPD 120

Query: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151
           EPSVVAEAKALVSEEAEEKDEKKEAREEKKE
Sbjct: 121 EPSVVAEAKALVSEEAEEKDEKKEAREEKKE 151

BLAST of IVF0005995 vs. NCBI nr
Match: XP_011658674.1 (nucleoplasmin-like protein ANO39 [Cucumis sativus] >KGN43445.1 hypothetical protein Csa_020373 [Cucumis sativus])

HSP 1 Score: 170 bits (431), Expect = 2.76e-51
Identity = 126/153 (82.35%), Postives = 132/153 (86.27%), Query Frame = 0

Query: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKV-EVVDERS 60
           MATVE VSPNA LLEDTT VKET  KEEVEEQSSP+ TSKE VEEKEESVKV EVVDE+S
Sbjct: 1   MATVEIVSPNATLLEDTTTVKETVTKEEVEEQSSPDTTSKENVEEKEESVKVDEVVDEKS 60

Query: 61  SDDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKP 120
           SDD SEAVV NEKVEATA    EEEEEEDEVVILTDDDEVEE   ++EAAEVAKEENDKP
Sbjct: 61  SDD-SEAVVPNEKVEATA----EEEEEEDEVVILTDDDEVEELEYNEEAAEVAKEENDKP 120

Query: 121 DEPSVVAEAKALVSEEAEEKDEKK-EAREEKKE 151
           DE SVV EAKA+VSEEAEE+DEKK EA EEKKE
Sbjct: 121 DESSVVPEAKAVVSEEAEEEDEKKDEAAEEKKE 148

BLAST of IVF0005995 vs. NCBI nr
Match: XP_023511645.1 (glutamic acid-rich protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104 bits (259), Expect = 2.70e-25
Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0

Query: 6   TVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSSDDYSE 65
           T+SPNA LLE+T ++KET AKEEVEE + P +T +EK E KEESV+VE V E     +SE
Sbjct: 4   TISPNAALLEETNVLKETAAKEEVEEPAPPAVTPEEKAE-KEESVEVETVAEPP---HSE 63

Query: 66  AVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPDEPSVV 125
           A VSNEKVE T ++EEE EEEE+EV+ILTD+ E EE  E+   AEVAKEE+D PDE S  
Sbjct: 64  AAVSNEKVEPT-EEEEEVEEEEEEVMILTDESEAEEEPEA--VAEVAKEESDSPDESSA- 123

Query: 126 AEAKALVSEEAEEKDEKKEA 145
            EA A  +EEA+E+DEKKEA
Sbjct: 124 PEADAPAAEEAKEEDEKKEA 135

BLAST of IVF0005995 vs. NCBI nr
Match: KAG6572249.1 (hypothetical protein SDJN03_28977, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.8 bits (247), Expect = 1.64e-23
Identity = 87/145 (60.00%), Postives = 105/145 (72.41%), Query Frame = 0

Query: 1   MATVETVSPNAVLLEDTTIVKETNAKEEVEEQSSPNITSKEKVEEKEESVKVEVVDERSS 60
           MATVET+SPNA LLE+T ++KET AKE VEE + P +T +EK E KEESV+VE V E   
Sbjct: 1   MATVETISPNAALLEETNVLKETAAKEGVEEPAPPAVTPEEKAE-KEESVEVETVAEPP- 60

Query: 61  DDYSEAVVSNEKVEATADQEEEEEEEEDEVVILTDDDEVEEYLESKEAAEVAKEENDKPD 120
             +SEA V NEKVEAT ++EEE EEEE+EVVILTD+ + EE  E+   AEV KEE+D PD
Sbjct: 61  --HSEATVLNEKVEAT-EEEEEVEEEEEEVVILTDESKAEEEPEA--VAEVTKEESDSPD 120

Query: 121 EPSVVAEAKALVSEEAEEKDEKKEA 145
           E S   EA A  +EE   +DEKKEA
Sbjct: 121 ESSA-PEADAPATEE---EDEKKEA 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UTC31.9e-59100.00Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3C1851.2e-5899.34glutamic acid-rich protein-like OS=Cucumis melo OX=3656 GN=LOC103495666 PE=4 SV=... [more]
A0A0A0K1971.1e-3882.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037490 PE=4 SV=1[more]
A0A6J1HYF71.5e-1658.50glutamic acid-rich protein-like OS=Cucurbita maxima OX=3661 GN=LOC111468066 PE=4... [more]
A0A6J1EXC57.2e-0647.68X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like OS=Cuc... [more]
Match NameE-valueIdentityDescription
KAA0059152.11.71e-78100.00glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK02536.1 glutamic ... [more]
XP_008455514.11.99e-7799.34PREDICTED: glutamic acid-rich protein-like [Cucumis melo][more]
XP_011658674.12.76e-5182.35nucleoplasmin-like protein ANO39 [Cucumis sativus] >KGN43445.1 hypothetical prot... [more]
XP_023511645.12.70e-2561.43glutamic acid-rich protein-like [Cucurbita pepo subsp. pepo][more]
KAG6572249.11.64e-2360.00hypothetical protein SDJN03_28977, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..151
NoneNo IPR availableCOILSCoilCoilcoord: 63..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0005995.2IVF0005995.2mRNA