IVF0005937 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGAGGAAAGTACAAGAGCAAGCCCACCGGTCGGCGCCAATTCTCTACCCCTGAAGACATGCGTGAGCAATAATTCTCTCTCTTTTTCCACCACCTTCGTTTGATTATTGAAGATCACGACATATTTTTATATCATTGTTATCATTTCCCTGCCTATTGTTTTCATTTTATATATTTGAGGTGATGAATTCTAGTTGTTTTTCAAGGATACGAGCTGGTGATTGTCATGGAGAGTTCAGTGTTTGGAATGATGCTGGATATACCAGTGATTTAGGCTGTTTTATATTTTACTTACTTATTTATAGATCAGTTTCTGCGACTACGAGGAGATGGTTGGTGTCGAGATCTAGGCTTAGTTGATTCGGAAATAGTTTCACTTTTGTATTATGGAGTGTAGAATTTTCGTAATCTTAAGGAAGTTTATTGGTTATGTGCACGAGTTACTTCGACTGCAGAGTAGAATGCGTTTTGTTTTGGAGTTGCTGTAATAGTTTCTCTTTTTTTTTAACCACGTTCGCTCGATTATTGAGAAATTGAAGGTTACGAGTTCTTTTTCTTCGAGTGTTGAAATTAAAGTTGTTTCGTGCTTGACATGGAGAGTCTAGAAGAATGGTGCTGGATATTCAGCGACTTAAGCTGTTTTAGGCGTTGCTTAATTGTTTTTAGATCAGTTTCAGCAACTATGAGGAAGTGTGGTTGGTGGTGAGATCTAGGCGTAGTTGATAGTGGATAGAATTTTACCTTTTTATTGTGGAATCTGAAACTTTTGTAATCTAATAAAGCGTCTTGGTAATATAGCTAGTTCTATGGTTTTTGCTTTGGAATTGGTTCTTAGAACTAGAAAAGATAGGAGAGATGGATGGTGTGGGGGAATTAACCTTTTTTTATCATCCTTACATATGGTTCTGCAATTTGTAGTCTCATTTTTTAGACTTTAAGATGGGTGAAATTCGAGTTGCTAACTTCAGTTTCTGAATTAATTGTAGTTGCTGGGACCTCCACACGTCCACGCACGTTTAAACAGGTTCTCTCTCCCCCTCCCCCTCCCCCTCTTTGTCTGTGTTCTCACTGCCATTATGCACAAGTCCTACAGTGCCCCACAGTTGTTTTTGTCAATTGAGAATAGATAATACCCTGATGTGTTGCAACTTTCCCCAGCAGTTGGTTCTTCAACTGCATGGTTTTGCTCTTTCTTTTTACTTACTTTTGTGCACACGAGGTATTTAATCTAGTATTACAGGTAGAAGCTGAGCACAAGGAGGAGGAAGAATCTGAGGAAGGATCTGAACAAGAATCTGGGGATGAATCTGATGATCAGGGAGATAAACCTAGAGTTTGTATTCAGTGACCTTCCTTATACATAAATCTAATTTTCTGCATGTCTTGTTATTTTCCATTTGAGCCGGGCAAGACTAAGTCTTCTTTATTTTGTTGTCAAATTCTGCCAGAGGAAAGGCACTCAAGGTATTATTGAGATCGAAAATCCTAACTTGGTCAAGCCAAAAACCTTGAAAGCTAGAGATATTGATGTAAGTTAATATTCATCCTTACATATGGTTTTACGATTTGAACATTGATATAGAGTTGATGTGTAACTTCACTTCACGTTGCAGATTGGGAAAACAACTGAACTTTCAAGGCGTGAAAGGTTGTTATAAGTTCTATTTTGTTTGTTTTAACAGATATTCAACATTTATTTAATTTCTATGATTATTGTTCTAGATTCAGACATGTCATTATATAGATTTAGGAATGCTTTTCTCACAGTTTACGAAATTGTATTTATTCTTTTTACCAGGGAAGAGATAGAGAAACAAAAGGCTCACGAACGATTCATGAGGCTTCAAGAACAAGGGAAAACTGAACAAGCTAGGAAAGATTTAGGTAATCCTTTTTCAATGATCAATGATTTAAGTGTGCCTTCTATGTTTCTGAGAATGGAGTCCTTTTAATCATCATTCTGTCATCCAAGATTAGTATTTGCGCTTTCTTTTTATTCTTGTTCTGAGTTAAAAGGGAAAAACTTATAGGAGCTCTCAAAATGATCACCTGCATGCCACACTTTCTTTTGTATTAAATCATATAATATAAATTTGGTTCAAAATGCACTTTTGATAATATCATGGTAAACCATGCTAAGTCCTGGAACAACTATTATCTTGTGCACTAATGTTAGCTGGTGAATGTCATGAACAAATTTGAAGGAAGAACTTTCGTTTGGACTGTCCAATATTGAAATTTTGTTTCACGGTATGCTATGCAGAACGTTTGAGTCTTATTCGTCAACAAAGGGAAGAAGCTGCTAAAAAAAGAGAAGAAGAAAAGGCTGGTAATATATACAACAGTACACAAAAGCTCTTATAGTACCATTCCCTTTTAACATTGAATTGAACTGATATTCACTCTCCCTCTTTCCCTCACTTTCAGCCAGAGAACAGAAGAAAGCAGAAGCTCGGAAATGA ATGGGAAGAGGAAAGTACAAGAGCAAGCCCACCGGTCGGCGCCAATTCTCTACCCCTGAAGACATGCTTGCTGGGACCTCCACACGTCCACGCACGTTTAAACAGGTAGAAGCTGAGCACAAGGAGGAGGAAGAATCTGAGGAAGGATCTGAACAAGAATCTGGGGATGAATCTGATGATCAGGGAGATAAACCTAGAAGGAAAGGCACTCAAGGTATTATTGAGATCGAAAATCCTAACTTGGTCAAGCCAAAAACCTTGAAAGCTAGAGATATTGATATTGGGAAAACAACTGAACTTTCAAGGCGTGAAAGGGAAGAGATAGAGAAACAAAAGGCTCACGAACGATTCATGAGGCTTCAAGAACAAGGGAAAACTGAACAAGCTAGGAAAGATTTAGAACGTTTGAGTCTTATTCGTCAACAAAGGGAAGAAGCTGCTAAAAAAAGAGAAGAAGAAAAGGCTGCCAGAGAACAGAAGAAAGCAGAAGCTCGGAAATGA ATGGGAAGAGGAAAGTACAAGAGCAAGCCCACCGGTCGGCGCCAATTCTCTACCCCTGAAGACATGCTTGCTGGGACCTCCACACGTCCACGCACGTTTAAACAGGTAGAAGCTGAGCACAAGGAGGAGGAAGAATCTGAGGAAGGATCTGAACAAGAATCTGGGGATGAATCTGATGATCAGGGAGATAAACCTAGAAGGAAAGGCACTCAAGGTATTATTGAGATCGAAAATCCTAACTTGGTCAAGCCAAAAACCTTGAAAGCTAGAGATATTGATATTGGGAAAACAACTGAACTTTCAAGGCGTGAAAGGGAAGAGATAGAGAAACAAAAGGCTCACGAACGATTCATGAGGCTTCAAGAACAAGGGAAAACTGAACAAGCTAGGAAAGATTTAGAACGTTTGAGTCTTATTCGTCAACAAAGGGAAGAAGCTGCTAAAAAAAGAGAAGAAGAAAAGGCTGCCAGAGAACAGAAGAAAGCAGAAGCTCGGAAATGA MGRGKYKSKPTGRRQFSTPEDMLAGTSTRPRTFKQVEAEHKEEEESEEGSEQESGDESDDQGDKPRRKGTQGIIEIENPNLVKPKTLKARDIDIGKTTELSRREREEIEKQKAHERFMRLQEQGKTEQARKDLERLSLIRQQREEAAKKREEEKAAREQKKAEARK Homology
BLAST of IVF0005937 vs. ExPASy Swiss-Prot
Match: Q3UHX2 (28 kDa heat- and acid-stable phosphoprotein OS=Mus musculus OX=10090 GN=Pdap1 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-19 Identity = 81/183 (44.26%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of IVF0005937 vs. ExPASy Swiss-Prot
Match: Q62785 (28 kDa heat- and acid-stable phosphoprotein OS=Rattus norvegicus OX=10116 GN=Pdap1 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-19 Identity = 81/183 (44.26%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of IVF0005937 vs. ExPASy Swiss-Prot
Match: Q13442 (28 kDa heat- and acid-stable phosphoprotein OS=Homo sapiens OX=9606 GN=PDAP1 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.6e-19 Identity = 80/183 (43.72%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of IVF0005937 vs. ExPASy Swiss-Prot
Match: Q556U5 (28 kDa heat- and acid-stable phosphoprotein homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0273095 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 4.0e-07 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of IVF0005937 vs. ExPASy TrEMBL
Match: A0A5D3CQ74 (28 kDa heat-and acid-stable phosphoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007860 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 2.3e-74 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of IVF0005937 vs. ExPASy TrEMBL
Match: A0A1S3AZ63 (28 kDa heat- and acid-stable phosphoprotein OS=Cucumis melo OX=3656 GN=LOC103484483 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 2.3e-74 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of IVF0005937 vs. ExPASy TrEMBL
Match: A0A0A0KHS1 (PP28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G518250 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 5.2e-74 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of IVF0005937 vs. ExPASy TrEMBL
Match: A0A6J1IUZ4 (28 kDa heat- and acid-stable phosphoprotein-like OS=Cucurbita maxima OX=3661 GN=LOC111478634 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 3.5e-70 Identity = 160/166 (96.39%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of IVF0005937 vs. ExPASy TrEMBL
Match: A0A6J1ECQ7 (28 kDa heat- and acid-stable phosphoprotein-like OS=Cucurbita moschata OX=3662 GN=LOC111433129 PE=4 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 3.5e-70 Identity = 160/166 (96.39%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of IVF0005937 vs. NCBI nr
Match: XP_008439793.1 (PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Cucumis melo] >TYK13174.1 28 kDa heat- and acid-stable phosphoprotein [Cucumis melo var. makuwa]) HSP 1 Score: 289 bits (739), Expect = 1.14e-97 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of IVF0005937 vs. NCBI nr
Match: XP_004134678.1 (28 kDa heat- and acid-stable phosphoprotein [Cucumis sativus] >KGN49270.1 hypothetical protein Csa_003616 [Cucumis sativus]) HSP 1 Score: 288 bits (736), Expect = 3.25e-97 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of IVF0005937 vs. NCBI nr
Match: XP_038883580.1 (28 kDa heat- and acid-stable phosphoprotein [Benincasa hispida]) HSP 1 Score: 284 bits (727), Expect = 7.66e-96 Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of IVF0005937 vs. NCBI nr
Match: XP_022925842.1 (28 kDa heat- and acid-stable phosphoprotein-like [Cucurbita moschata] >XP_022978774.1 28 kDa heat- and acid-stable phosphoprotein-like [Cucurbita maxima]) HSP 1 Score: 275 bits (703), Expect = 3.37e-92 Identity = 160/166 (96.39%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of IVF0005937 vs. NCBI nr
Match: XP_023543121.1 (28 kDa heat- and acid-stable phosphoprotein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 274 bits (700), Expect = 9.65e-92 Identity = 159/166 (95.78%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of IVF0005937 vs. TAIR 10
Match: AT5G46020.1 (CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 193.0 bits (489), Expect = 2.0e-49 Identity = 119/169 (70.41%), Postives = 144/169 (85.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|