IVF0005466 (gene) Melon (IVF77) v1

Overview


Name	IVF0005466
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Replication termination factor 2
Location	chr02: 12236773 .. 12238435 (+)
RNA-Seq Expression	IVF0005466
Synteny	IVF0005466

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGTAACGTTCGTCGCTGAGGCATTCGGCTTCCACCGTACGTCCGCTCGGTCTGCTCGGCTCCTCCATCAACTTGTAAGTCTCAAAGTTCTCGTTCTCGTTCTGGTTTTGTTCGAAACCCTATTTATAGATTTGATCGTGATCGCGAAACTCTACCCACTGAATTTCGTCATCCTTTTTCGAATCTCGAAACCCTAAGTAATGCATCCGAAGAACCAACACCGTCTTCAGATCTTCCTTCATTCTCCAGACCTCCAAATTCAATCCAAAATCGTAGACCTGCCACAAACTTCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCTCTGAAACGCTCGCTTCACGGGTTGCATCATCTCTCTACTTTACCCTCAATGGGAAACCCCTTCTGGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACAGGGGCCGAGTCGCGTGACTGCTACCTTAATATGTACGCAGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGTGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCACTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCAATTTCAGAGCCACGGTTCCAATGCCCCATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTCAAATCTTCTTCCTGCCTTGTATGTCATACTGAGTTTACGGAAAGAGATAAATTTGTGATCAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCGAAATCGAAATCGAAGGAGAAGAAGACAAAGAAAGTGAGGAATGGGGAAGTGGGTATGAATGGAGATGTGACTATGGATTTGGCAACATCTCGTTTGTCTGGTAAAAAGCATGGTATTGAACTTCAGACTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCATGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGTTGCAGCTAGTAATGGTGCTGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCGGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAATTGGTGATAAGAACTGCTTAGATGGGTTTGTGGCAATTCTCCTATTATTGTTTGTATTCAAACCTTCATTTTCAGTGTCCTTATGTGCTTATTGATTCATGTCTCATAGTTTCTAATTAATGTAAGATGTTACTTCACACTTTACAGTCACCAACTGCTTTTAGTCTGTTGAGCTGTTTTACATTTGTAGATGAGTTAATATTTGATGAAACTCTTTTGCTGATCTCAATCCATTAGCCTCTAGCAGTACAACGTTTTGAGTCCATGCTTGTGGTTTTGAAAAAAGAACCGCCGATGAAG

mRNA sequence

CTTTGTAACGTTCGTCGCTGAGGCATTCGGCTTCCACCGTACGTCCGCTCGGTCTGCTCGGCTCCTCCATCAACTTGTAAGTCTCAAAGTTCTCGTTCTCGTTCTGGTTTTGTTCGAAACCCTATTTATAGATTTGATCGTGATCGCGAAACTCTACCCACTGAATTTCGTCATCCTTTTTCGAATCTCGAAACCCTAAGTAATGCATCCGAAGAACCAACACCGTCTTCAGATCTTCCTTCATTCTCCAGACCTCCAAATTCAATCCAAAATCGTAGACCTGCCACAAACTTCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCTCTGAAACGCTCGCTTCACGGGTTGCATCATCTCTCTACTTTACCCTCAATGGGAAACCCCTTCTGGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACAGGGGCCGAGTCGCGTGACTGCTACCTTAATATGTACGCAGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGTGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCACTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCAATTTCAGAGCCACGGTTCCAATGCCCCATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTCAAATCTTCTTCCTGCCTTGTATGTCATACTGAGTTTACGGAAAGAGATAAATTTGTGATCAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCGAAATCGAAATCGAAGGAGAAGAAGACAAAGAAAGTGAGGAATGGGGAAGTGGGTATGAATGGAGATGTGACTATGGATTTGGCAACATCTCGTTTGTCTGGTAAAAAGCATGGTATTGAACTTCAGACTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCATGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGTTGCAGCTAGTAATGGTGCTGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCGGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAATTGGTGATAAGAACTGCTTAGATGGGTTTGTGGCAATTCTCCTATTATTGTTTGTATTCAAACCTTCATTTTCAGTGTCCTTATGTGCTTATTGATTCATGTCTCATAGTTTCTAATTAATGTAAGATGTTACTTCACACTTTACAGTCACCAACTGCTTTTAGTCTGTTGAGCTGTTTTACATTTGTAGATGAGTTAATATTTGATGAAACTCTTTTGCTGATCTCAATCCATTAGCCTCTAGCAGTACAACGTTTTGAGTCCATGCTTGTGGTTTTGAAAAAAGAACCGCCGATGAAG

Coding sequence (CDS)

ATGCATCCGAAGAACCAACACCGTCTTCAGATCTTCCTTCATTCTCCAGACCTCCAAATTCAATCCAAAATCGTAGACCTGCCACAAACTTCGGCCAAAACCCTAGAGGACCTGAAGTTCTCTCTTCTCTCTGAAACGCTCGCTTCACGGGTTGCATCATCTCTCTACTTTACCCTCAATGGGAAACCCCTTCTGGATTCCACTACGATTTCTCTAATTCCCCCTTTGTCCACCTTAATCTTAAGAACCAGGGTCCTTGGAGGTGGTGGCGATGGCGGTGCAACAGGGGCCGAGTCGCGTGACTGCTACCTTAATATGTACGCAGAGAAGAAACCCGATAAGGTCGATCCTAACGAGCAGAGGCTGTCCAAGTGGTTGAATTGCGCTCTTTCTAACGAGCCTTTGAGTGAACCTTGTGTGATTGATTGGCTTGGAAATGTCTTCAATAAGGAATCACTTGTGCAGGCTTTGCTAGAGAAGAAGTTGCCAAAAGGATTCGGGCATATCAAGGGTCTGAAGGATATGATCAAGATAAATTTTTCGATGATTCCCGGTACAGAATCGCGTGGGAATGCAATTTCAGAGCCACGGTTCCAATGCCCCATTACTGGTCTTGAGTTCAATGGTAAGTACAAGTTTTTTGCTCTGAGAACTTGTGGACATGTGTTGAGTGCAAAGGCCTTGAAGGAGGTCAAATCTTCTTCCTGCCTTGTATGTCATACTGAGTTTACGGAAAGAGATAAATTTGTGATCAATGGGAGCGAGGAGGAGGTAGAAGAAATGAGGGAGAGAATGGAGGAAGAGAAGTCGAAATCGAAATCGAAGGAGAAGAAGACAAAGAAAGTGAGGAATGGGGAAGTGGGTATGAATGGAGATGTGACTATGGATTTGGCAACATCTCGTTTGTCTGGTAAAAAGCATGGTATTGAACTTCAGACTTTGGAGAAGGTTTCTGCTAAGCCTGAAAGGCATGAGCGGCTAGATGGTGGAGCTCAGGTAAAGGTTGCAGCTAGTAATGGTGCTGTAAAGCGTTTTAAAGCAGCAGACATGGTCCCGGCCAATGCTACCAAAGAAGTTTATGCTTCAATATTCACCTCATCTAGGAAGTCAGATTTCAAGGAAACATATTCTTGTAGATCTCTTCCACTCGGTCGAAACTAA

Protein sequence

MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLNGKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVYASIFTSSRKSDFKETYSCRSLPLGRN

Homology

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BLAST of IVF0005466 vs. ExPASy Swiss-Prot
Match: Q3T1J8 (Replication termination factor 2 OS=Rattus norvegicus OX=10116 GN=Rtf2 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-32
Identity = 97/272 (35.66%), Postives = 146/272 (53.68%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E L  P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRFQCPITGLEFNGKYKFFALR 229
             HI+ +K++ ++  S  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  TSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C   F E D  V+NG++E+VE ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAK-LEK 198

Query: 290 KTKKVRNGEVGMNGDVTMDLA--TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKV 349
           KTKK +  E      ++ D A  +   +GK    +    EK S+   R    +G A  KV
Sbjct: 199 KTKKPKTAESASKLGISQDSAGPSKAKAGKSEEADPDPREKKSSLAPRGTASNGSASGKV 258

Query: 350 AASN-GAVKRFKAADMVPANATKEVYASIFTS 367
                GA+KR      +  +   E Y SIFTS
Sbjct: 259 GKPPCGALKR-----SIADSEESETYKSIFTS 284

[Close]

BLAST of IVF0005466 vs. ExPASy Swiss-Prot
Match: Q99K95 (Replication termination factor 2 OS=Mus musculus OX=10090 GN=Rtf2 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.4e-32
Identity = 99/273 (36.26%), Postives = 145/273 (53.11%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E L  P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRFQCPITGLEFNGKYKFFALR 229
             HI+ +K++ ++  S  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C   F E D  V+NG++E+VE +++RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRAK-LEK 198

Query: 290 KTKKVRNG-EVGMNGDVTMDLA--TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVK 349
           KTKK +   E       T D A  +   SGK    +    EK S    R    +G A  K
Sbjct: 199 KTKKPKTATECASKPGTTQDSAGPSKVKSGKPEEADPDPREKKSTPAPRGAATNGSASGK 258

Query: 350 VAASN-GAVKRFKAADMVPANATKEVYASIFTS 367
           V     GA+KR      +  +   E Y SIFTS
Sbjct: 259 VGKPPCGALKR-----SIADSEESETYKSIFTS 285

[Close]

BLAST of IVF0005466 vs. ExPASy Swiss-Prot
Match: Q0VCR1 (Replication termination factor 2 OS=Bos taurus OX=9913 GN=RTF2 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.1e-29
Identity = 94/282 (33.33%), Postives = 147/282 (52.13%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E L  P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRFQCPITGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C   F E D  V+NG++E+VE ++ R+EE + ++K   K
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVEVLKSRIEERRLRAK-LGK 198

Query: 290 KTKKVRNGEVGMNGDVTMDL--ATSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKV 349
           KTKK +  E     +V+ +    +   +GK     L T EK +            +  K 
Sbjct: 199 KTKKPKVAESVSKSEVSEETPGPSKVKTGKPEETSLDTREKKT-----------NSAPKS 258

Query: 350 AASNGAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
           AA++G      A   +  +   E Y S+FT  SS K   +E+
Sbjct: 259 AAAHGITSGKAAKRSIADSEESEAYKSLFTTHSSAKRSKEES 288

[Close]

BLAST of IVF0005466 vs. ExPASy Swiss-Prot
Match: Q9BY42 (Replication termination factor 2 OS=Homo sapiens OX=9606 GN=RTF2 PE=1 SV=3)

HSP 1 Score: 129.8 bits (325), Expect = 6.6e-29
Identity = 94/283 (33.22%), Postives = 149/283 (52.65%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E L  P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRFQCPITGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C   F E D  ++NG++E+V+ ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAK-LEK 198

Query: 290 KTKKVRNGEVGMNGDVTMDL--ATSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKV 349
           KTKK +  E     DV+ +    +   +GK     L + EK +    +   ++  +  K 
Sbjct: 199 KTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTAMNESSSGKA 258

Query: 350 AASN-GAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
                GA KR      +  +   E Y S+FT  SS K   +E+
Sbjct: 259 GKPPCGATKR-----SIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]

BLAST of IVF0005466 vs. ExPASy Swiss-Prot
Match: Q5R9P9 (Replication termination factor 2 OS=Pongo abelii OX=9601 GN=RTF2 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.6e-29
Identity = 95/283 (33.57%), Postives = 148/283 (52.30%), Query Frame = 0


Query: 110 KKPDKVDPNEQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFG-- 169
           KK +KVD + + +++W  C LS E L  P V   LG ++NK+++++ LL+K   K  G  
Sbjct: 19  KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78

Query: 170 --HIKGLKDMIKINFSMIPGTE-SRGNA-------ISEPRFQCPITGLEFNGKYKFFALR 229
             HIK +K++ ++  S  P  E  +GN        +   RF CP+ GLE NG+++F  LR
Sbjct: 79  ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138

Query: 230 TCGHVLSAKALKEVKSSSCLVCHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEK 289
            CG V S +ALKE+K+  C  C   F E D  V+NG++E+V+ ++ RMEE + ++K  EK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAK-LEK 198

Query: 290 KTKKVRNGEVGMNGDVTMDL--ATSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKV 349
           KTKK +  E     DV+ +    +   +GK     L + EK +    +    +  +  K 
Sbjct: 199 KTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTATNESSSGKA 258

Query: 350 AASN-GAVKRFKAADMVPANATKEVYASIFT--SSRKSDFKET 376
                GA KR      +  +   E Y S+FT  SS K   +E+
Sbjct: 259 GKPPCGATKR-----SIADSEESEAYKSLFTTHSSAKRSKEES 295

[Close]

BLAST of IVF0005466 vs. ExPASy TrEMBL
Match: A0A5A7SWS4 (Replication termination factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00470 PE=3 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 7.7e-214
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300
           TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS
Sbjct: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300

Query: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. ExPASy TrEMBL
Match: A0A1S3B9F3 (Replication termination factor 2 OS=Cucumis melo OX=3656 GN=LOC103487489 PE=3 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 7.7e-214
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300
           TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS
Sbjct: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300

Query: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. ExPASy TrEMBL
Match: A0A0A0LTI5 (Replication termination factor 2 OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=3 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 2.6e-201
Identity = 362/386 (93.78%), Postives = 373/386 (96.63%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           MHPKNQHR QIFL SPDLQI+SKIV+LPQT AKTLEDLKFSLL+E LASR+ASS YFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300
            EF ERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDV++DLA S
Sbjct: 241 AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS 300

Query: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKH IE+++LEKVSAKPER ERLDGGAQVK A SNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 387
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. ExPASy TrEMBL
Match: A0A6J1F067 (Replication termination factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111440971 PE=3 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.5e-185
Identity = 340/388 (87.63%), Postives = 357/388 (92.01%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           M+PKNQHRLQ F+HSPDLQIQSKIV+L QTSA++L DLK SL+  T ASR+ASS YFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDS TI  SL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SM+PGTESRGNAISE RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300
           CH EF +RDKFVINGSEEEV  MRERMEEE  K+KSKEKKTKKVR GEVGMNGDV++DLA
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEE--KTKSKEKKTKKVRTGEVGMNGDVSVDLA 300

Query: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360
           +SRLSGKKHGIE + L KVSAKPE+HER D G QVKVAASNGAVKRFKAADM PANATKE
Sbjct: 301 SSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. ExPASy TrEMBL
Match: A0A6J1KUM3 (Replication termination factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111498815 PE=3 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 2.4e-183
Identity = 337/388 (86.86%), Postives = 354/388 (91.24%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           M+PKNQHRLQ F+ SPDLQIQSKIV+L QTSA++L DLK SLL    ASR+ASS YFTLN
Sbjct: 1   MYPKNQHRLQFFVRSPDLQIQSKIVNLAQTSAQSLADLKLSLLLNAPASRLASSFYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDS TI  SL+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGN+FNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SMIPGTESRGN ISE RFQCPITGLEFNGKYKFFALR CGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMIPGTESRGNEISEARFQCPITGLEFNGKYKFFALRACGHVLSAKALKEVKSSSCLV 240

Query: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300
           CH EF +RDKFVINGSEEEV  MRERMEEE  K+K+KEKKTKKVR GEVGMNGDV++DLA
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEE--KTKAKEKKTKKVRTGEVGMNGDVSVDLA 300

Query: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360
           +SRLSGKKHGIE + L K+SAKPE+HER D G QVKVAASNGAVKRFKAADM PANATKE
Sbjct: 301 SSRLSGKKHGIEGKALGKISAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 387
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. NCBI nr
Match: XP_008444038.1 (PREDICTED: protein RTF2 homolog [Cucumis melo] >KAA0035058.1 protein RTF2-like protein [Cucumis melo var. makuwa] >TYK03620.1 protein RTF2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 751 bits (1940), Expect = 2.18e-273
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN
Sbjct: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300
           TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS
Sbjct: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300

Query: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. NCBI nr
Match: XP_011655923.1 (replication termination factor 2 [Cucumis sativus] >KGN65240.1 hypothetical protein Csa_019614 [Cucumis sativus])

HSP 1 Score: 710 bits (1832), Expect = 6.29e-257
Identity = 362/386 (93.78%), Postives = 373/386 (96.63%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           MHPKNQHR QIFL SPDLQI+SKIV+LPQT AKTLEDLKFSLL+E LASR+ASS YFTLN
Sbjct: 1   MHPKNQHRFQIFLQSPDLQIESKIVNLPQTPAKTLEDLKFSLLTEILASRIASSFYFTLN 60

Query: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120
           GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ
Sbjct: 61  GKPLLDSTTISLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQ 120

Query: 121 RLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180
           RLSKWLNCALSNEPL EPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF
Sbjct: 121 RLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINF 180

Query: 181 SMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240
           SMIPGTESRGNAISEPR+QCP+TGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH
Sbjct: 181 SMIPGTESRGNAISEPRYQCPVTGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCH 240

Query: 241 TEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATS 300
            EF ERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDV++DLA S
Sbjct: 241 AEFAERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVSVDLAIS 300

Query: 301 RLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVY 360
           RLSGKKH IE+++LEKVSAKPER ERLDGGAQVK A SNGAVKRFKAADMVPANATKEVY
Sbjct: 301 RLSGKKHAIEVKSLEKVSAKPERQERLDGGAQVKDATSNGAVKRFKAADMVPANATKEVY 360

Query: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386
           ASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 ASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. NCBI nr
Match: XP_038879920.1 (replication termination factor 2 [Benincasa hispida])

HSP 1 Score: 690 bits (1780), Expect = 5.68e-249
Identity = 355/388 (91.49%), Postives = 369/388 (95.10%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           MHPKN+HRLQIFLHS DLQIQS+IV+LPQ+ A+TLEDLKFSLL ETLASRVASS YFTLN
Sbjct: 1   MHPKNEHRLQIFLHSLDLQIQSQIVNLPQSPAQTLEDLKFSLLPETLASRVASSFYFTLN 60

Query: 61  GKPLLDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPL DSTTI  SL+PPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN
Sbjct: 61  GKPLPDSTTIPSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGNVFNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNVFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N S+IPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSVIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300
           CH EFT RDKFVINGSEEEVEEMRERMEEEKSKS+SKEKKTKKVRN E G+NGD+++D A
Sbjct: 241 CHAEFTNRDKFVINGSEEEVEEMRERMEEEKSKSRSKEKKTKKVRNEEGGINGDMSVDFA 300

Query: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKHGIE++ LEKVSAKPERHER DGG QVKVAASNGAVKRFKAADMVPANATKE
Sbjct: 301 ASRLSGKKHGIEVKALEKVSAKPERHERPDGGVQVKVAASNGAVKRFKAADMVPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 388

[Close]

BLAST of IVF0005466 vs. NCBI nr
Match: XP_022933589.1 (protein RTF2 homolog [Cucurbita moschata])

HSP 1 Score: 657 bits (1695), Expect = 4.69e-236
Identity = 340/388 (87.63%), Postives = 357/388 (92.01%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           M+PKNQHRLQ F+HSPDLQIQSKIV+L QTSA++L DLK SL+  T ASR+ASS YFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSKIVNLAQTSAQSLADLKLSLILNTPASRLASSFYFTLN 60

Query: 61  GKPLLDSTTIS--LIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDS TIS  L+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNCALSNEPL EPCVIDWLGN+FNKE LV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCALSNEPLREPCVIDWLGNIFNKEPLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SM+PGTESRGNAISE RFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMVPGTESRGNAISEARFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300
           CH EF +RDKFVINGSEEEV  MRERMEEEK+KSK  EKKTKKVR GEVGMNGDV++DLA
Sbjct: 241 CHAEFMDRDKFVINGSEEEVVRMRERMEEEKTKSK--EKKTKKVRTGEVGMNGDVSVDLA 300

Query: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360
           +SRLSGKKHGIE + L KVSAKPE+HER D G QVKVAASNGAVKRFKAADM PANATKE
Sbjct: 301 SSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGAVKRFKAADMAPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. NCBI nr
Match: XP_023531451.1 (protein RTF2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 654 bits (1686), Expect = 1.10e-234
Identity = 340/388 (87.63%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 1   MHPKNQHRLQIFLHSPDLQIQSKIVDLPQTSAKTLEDLKFSLLSETLASRVASSLYFTLN 60
           M+PKNQHRLQ F+HSPDLQIQS IV+L QTSA++L DLK SLL +T ASR+ASS YFTLN
Sbjct: 1   MYPKNQHRLQFFVHSPDLQIQSTIVNLAQTSAQSLADLKLSLLLKTPASRLASSFYFTLN 60

Query: 61  GKPLLDSTTIS--LIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPN 120
           GKPLLDS TIS  L+PPLSTLILRTRVLGGGGDGGATGAESRDCYL MYAEKKPDKVDPN
Sbjct: 61  GKPLLDSATISSSLVPPLSTLILRTRVLGGGGDGGATGAESRDCYLKMYAEKKPDKVDPN 120

Query: 121 EQRLSKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKI 180
           EQRLSKWLNC+LSNEPL EPCVIDWLGN+FNKESLV ALLEKKLPKGFGHIKGLKDMIKI
Sbjct: 121 EQRLSKWLNCSLSNEPLREPCVIDWLGNIFNKESLVHALLEKKLPKGFGHIKGLKDMIKI 180

Query: 181 NFSMIPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240
           N SMIPGTESRGNAISE RFQCPITGLE NGKYKFFALRTCGHVLSAKALKEVKSSSCLV
Sbjct: 181 NLSMIPGTESRGNAISEARFQCPITGLESNGKYKFFALRTCGHVLSAKALKEVKSSSCLV 240

Query: 241 CHTEFTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLA 300
           CHTEF +RDKFVINGSEEEV  MRERMEEEK+KSK  EKKTKKVR GEVGMNGDV++DLA
Sbjct: 241 CHTEFMDRDKFVINGSEEEVVRMRERMEEEKTKSK--EKKTKKVRTGEVGMNGDVSVDLA 300

Query: 301 TSRLSGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKE 360
            SRLSGKKHGIE + L KVSAKPE+HER D G QVKVAASNG VKRFKAADM PANATKE
Sbjct: 301 PSRLSGKKHGIEGKALGKVSAKPEKHERPDSGVQVKVAASNGGVKRFKAADMAPANATKE 360

Query: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386
           VYASIFTSSRKSDFKETYSCRSLPLGRN
Sbjct: 361 VYASIFTSSRKSDFKETYSCRSLPLGRN 386

[Close]

BLAST of IVF0005466 vs. TAIR 10
Match: AT5G58020.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). )

HSP 1 Score: 380.2 bits (975), Expect = 2.0e-105
Identity = 222/385 (57.66%), Postives = 262/385 (68.05%), Query Frame = 0


Query: 8   RLQIFLHSPDLQIQSKIVDL---PQTSAKTLEDLKFSLLSETLASRVASSLYFTLNGKPL 67
           R QIF+ SPD Q   K+V L   P  S  TL  +   L S    S  A S+  TL+GK L
Sbjct: 4   RRQIFVKSPDCQ---KVVALQLDPAQSLLTLSGITSLLESSQRISFSACSI--TLDGKLL 63

Query: 68  LDSTTI--SLIPPLSTLILRTRVLGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 127
             ST I  S +P +S L L  R+ GGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL
Sbjct: 64  NGSTRIQVSKLPSVSMLTLFPRLRGGGGDGGATGAESRDCYLNMYAEKKPDKVDPNEQRL 123

Query: 128 SKWLNCALSNEPLSEPCVIDWLGNVFNKESLVQALLEKKLPKGFGHIKGLKDMIKINFSM 187
           SKWLNCALSNEPL+EPCVID LGN+FNKE LV ALL K+LPK F +IKGLKDM+ I  + 
Sbjct: 124 SKWLNCALSNEPLAEPCVIDLLGNLFNKEVLVHALLSKRLPKQFSYIKGLKDMVNIKLTP 183

Query: 188 IPGTESRGNAISEPRFQCPITGLEFNGKYKFFALRTCGHVLSAKALKEVKSSSCLVCHTE 247
           + G++      +  +FQCP++GLEFNGKYKFFALR CGHV+SAKALKEVKSSSCLVCH +
Sbjct: 184 VAGSDGSSQDTTSAQFQCPVSGLEFNGKYKFFALRGCGHVMSAKALKEVKSSSCLVCHAD 243

Query: 248 FTERDKFVINGSEEEVEEMRERMEEEKSKSKSKEKKTKKVRNGEVGMNGDVTMDLATSRL 307
             + DK VING+EEEV+ +RERMEEEK+K + K+  +KK +NG                 
Sbjct: 244 VKDSDKIVINGTEEEVDLLRERMEEEKAKLREKKGVSKKSKNGAA--------------- 303

Query: 308 SGKKHGIELQTLEKVSAKPERHERLDGGAQVKVAASNGAVKRFKAADMVPANATKEVYAS 367
                      +    AK  + +  DG     V  +   VK+FKAAD VP NATKEVYAS
Sbjct: 304 ----------VVADTGAKVAKRQIEDG----NVNGNGITVKKFKAADKVPVNATKEVYAS 354

Query: 368 IFTSS-RKSDFKETYSCRSLPLGRN 387
           +FTSS +KSDF+ETYSCRSLPLGRN
Sbjct: 364 LFTSSKKKSDFRETYSCRSLPLGRN 354

The following BLAST results are available for this feature:

BLAST of IVF0005466 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T1J8	1.3e-32	35.66	Replication termination factor 2 OS=Rattus norvegicus OX=10116 GN=Rtf2 PE=2 SV=1	[more]
Q99K95	8.4e-32	36.26	Replication termination factor 2 OS=Mus musculus OX=10090 GN=Rtf2 PE=1 SV=1	[more]
Q0VCR1	5.1e-29	33.33	Replication termination factor 2 OS=Bos taurus OX=9913 GN=RTF2 PE=2 SV=1	[more]
Q9BY42	6.6e-29	33.22	Replication termination factor 2 OS=Homo sapiens OX=9606 GN=RTF2 PE=1 SV=3	[more]
Q5R9P9	6.6e-29	33.57	Replication termination factor 2 OS=Pongo abelii OX=9601 GN=RTF2 PE=2 SV=1	[more]

BLAST of IVF0005466 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SWS4	7.7e-214	100.00	Replication termination factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3B9F3	7.7e-214	100.00	Replication termination factor 2 OS=Cucumis melo OX=3656 GN=LOC103487489 PE=3 SV...	[more]
A0A0A0LTI5	2.6e-201	93.78	Replication termination factor 2 OS=Cucumis sativus OX=3659 GN=Csa_1G269330 PE=3...	[more]
A0A6J1F067	1.5e-185	87.63	Replication termination factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111440971 P...	[more]
A0A6J1KUM3	2.4e-183	86.86	Replication termination factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111498815 PE=...	[more]

BLAST of IVF0005466 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444038.1	2.18e-273	100.00	PREDICTED: protein RTF2 homolog [Cucumis melo] >KAA0035058.1 protein RTF2-like p...	[more]
XP_011655923.1	6.29e-257	93.78	replication termination factor 2 [Cucumis sativus] >KGN65240.1 hypothetical prot...	[more]
XP_038879920.1	5.68e-249	91.49	replication termination factor 2 [Benincasa hispida]	[more]
XP_022933589.1	4.69e-236	87.63	protein RTF2 homolog [Cucurbita moschata]	[more]
XP_023531451.1	1.10e-234	87.63	protein RTF2 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0005466 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58020.1	2.0e-105	57.66	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 251..278
None	No IPR available	PFAM	PF04641	Rtf2	coord: 88..370 e-value: 1.3E-74 score: 250.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..290
None	No IPR available	PANTHER	PTHR12775:SF1	BNACNNG39770D PROTEIN	coord: 7..289 coord: 332..386
IPR006735	Replication termination factor 2	PANTHER	PTHR12775	PROTEIN C20ORF43 HOMOLOG	coord: 7..289 coord: 332..386
IPR027799	Replication termination factor 2, RING-finger	CDD	cd16653	RING-like_Rtf2	coord: 198..243 e-value: 1.81516E-26 score: 98.0819

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005466.2	IVF0005466.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902979	mitotic DNA replication termination
cellular_component	GO:0005634	nucleus