IVF0005413 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAACTGATAACTTTGTCCAACTAGCAATTCCTCACTTTGATGGTCATTATGACCATTGGAGCATGCTAATGTAAAATTTCTTGAGGTTTAAGGAATATTGGCAGGTTGTTGAATCTAGAGTAACAGAGCCTGCACTTGGAGCAATATTGTTTGATACACAAAAGTCAGAATTGAAAGCATTGAAGCTGAAGGACCTTAAAGCAAAAAACTATCTCTTCCAAGCAATTGATCGAGCAACTTTGGAAACAATTCTTTGCAAAGAAACCTCCAAACAGATTTGGGACTCTATGAAAAAAAGCATCAAAGGAACGCGAAGGCAGAGCGGGTGTAACTTTAAGGTCTTCGAACCGAATTCGAGACTCTACGAATGA ATGACAACTGATAACTTTGTCCAACTAGCAATTCCTCACTTTGATGGTCATTATGACCATTGGAGCATGCTAATAGTAACAGAGCCTGCACTTGGAGCAATATTGTTTGATACACAAAAGTCAGAATTGAAAGCATTGAAGCTGAAGGACCTTAAAGCAAAAAACTATCTCTTCCAAGCAATTGATCGAGCAACTTTGGAAACAATTCTTTGCAAAGAAACCTCCAAACAGATTTGGGACTCTATGAAAAAAAGCATCAAAGGAACGCGAAGGCAGAGCGGGTGTAACTTTAAGGTCTTCGAACCGAATTCGAGACTCTACGAATGA ATGACAACTGATAACTTTGTCCAACTAGCAATTCCTCACTTTGATGGTCATTATGACCATTGGAGCATGCTAATAGTAACAGAGCCTGCACTTGGAGCAATATTGTTTGATACACAAAAGTCAGAATTGAAAGCATTGAAGCTGAAGGACCTTAAAGCAAAAAACTATCTCTTCCAAGCAATTGATCGAGCAACTTTGGAAACAATTCTTTGCAAAGAAACCTCCAAACAGATTTGGGACTCTATGAAAAAAAGCATCAAAGGAACGCGAAGGCAGAGCGGGTGTAACTTTAAGGTCTTCGAACCGAATTCGAGACTCTACGAATGA MTTDNFVQLAIPHFDGHYDHWSMLIVTEPALGAILFDTQKSELKALKLKDLKAKNYLFQAIDRATLETILCKETSKQIWDSMKKSIKGTRRQSGCNFKVFEPNSRLYE Homology
BLAST of IVF0005413 vs. ExPASy TrEMBL
Match: A0A2I0B786 (Uncharacterized protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash005537 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 6.2e-28 Identity = 67/107 (62.62%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of IVF0005413 vs. ExPASy TrEMBL
Match: A0A1U7YQG9 (uncharacterized protein LOC104586702 OS=Nelumbo nucifera OX=4432 GN=LOC104586702 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25 Identity = 64/107 (59.81%), Postives = 73/107 (68.22%), Query Frame = 0
BLAST of IVF0005413 vs. ExPASy TrEMBL
Match: A0A5C7ICJ8 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008318 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.7e-25 Identity = 64/107 (59.81%), Postives = 77/107 (71.96%), Query Frame = 0
BLAST of IVF0005413 vs. ExPASy TrEMBL
Match: A0A6A6K386 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_043359 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.7e-25 Identity = 64/107 (59.81%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of IVF0005413 vs. ExPASy TrEMBL
Match: A0A438DX68 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_086202 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25 Identity = 61/117 (52.14%), Postives = 79/117 (67.52%), Query Frame = 0
BLAST of IVF0005413 vs. NCBI nr
Match: PKA63642.1 (hypothetical protein AXF42_Ash005537 [Apostasia shenzhenica]) HSP 1 Score: 132 bits (331), Expect = 2.62e-37 Identity = 67/107 (62.62%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of IVF0005413 vs. NCBI nr
Match: KAG2726386.1 (hypothetical protein I3760_01G109800 [Carya illinoinensis]) HSP 1 Score: 127 bits (320), Expect = 1.94e-35 Identity = 63/109 (57.80%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of IVF0005413 vs. NCBI nr
Match: XP_034707079.1 (uncharacterized protein LOC117930546 [Vitis riparia]) HSP 1 Score: 130 bits (327), Expect = 5.80e-35 Identity = 67/107 (62.62%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of IVF0005413 vs. NCBI nr
Match: XP_027152457.1 (uncharacterized protein LOC113752541 [Coffea eugenioides] >XP_027157388.1 uncharacterized protein LOC113758911 [Coffea eugenioides]) HSP 1 Score: 127 bits (320), Expect = 5.91e-34 Identity = 66/107 (61.68%), Postives = 74/107 (69.16%), Query Frame = 0
BLAST of IVF0005413 vs. NCBI nr
Match: XP_021623171.1 (uncharacterized protein LOC110622816 [Manihot esculenta]) HSP 1 Score: 125 bits (313), Expect = 1.08e-33 Identity = 65/106 (61.32%), Postives = 73/106 (68.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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