IVF0005289 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCCAAGACCTTGCAACCACCATACCCAGTTCTCAATCGTTGCCAGTATTCGCAGCCAATCGTGCCTAGAGCTTGCGACCTCCGACCCAGTTCTCAATCAGGCCCAGCCCTTGCCACCAATCGAGCCCAGACTTTACGACCACCGTACCCAGTTCCCAATCGTGCTCAATTCTCGCTACCAATCGTGCCCAAACCTTACGAACACCGTACCCAGTTCTCGCCGTCAACCGTGCAAAAACCTCGCGACCACCGTACCCAGTTCTCAATCCTGCCCAGCCTTCGCCACCAATTGTGCCCAGACCTCACGACCACCGTACCCAGTTCTCAATCGTGCCCAGTCCTCGCTGTCAATCATGCCCAGTCCTTGTCGCCACCCACGAATCTCCAACTTTGAAGATCATGAGCGGTATTATTCCTCTTCGACCAACGACGTTCAATGTGGTTTTCATCCCTTTTGA ATGGTGCCAAGACCTTGCAACCACCATACCCAGTTCTCAATCGTTGCCAGTATTCGCAGCCAATCGTGCCTAGAGCTTGCGACCTCCGACCCAGTTCTCAATCAGGCCCAGCCCTTGCCACCAATCGAGCCCAGACTTTACGACCACCGTACCCAGTTCCCAATCGTGCTCAATTCTCGCTACCAATCGTGCCCAAACCTTACGAACACCGTACCCAGTTCTCGCCGTCAACCGTGCAAAAACCTCGCGACCACCGTACCCAGTTCTCAATCCTGCCCAGCCTTCGCCACCAATTGTGCCCAGACCTCACGACCACCGTACCCAGTTCTCAATCGTGCCCAGTCCTCGCTGTCAATCATGCCCAGTCCTTGTCGCCACCCACGAATCTCCAACTTTGAAGATCATGAGCGGTATTATTCCTCTTCGACCAACGACGTTCAATGTGGTTTTCATCCCTTTTGA ATGGTGCCAAGACCTTGCAACCACCATACCCAGTTCTCAATCGTTGCCAGTATTCGCAGCCAATCGTGCCTAGAGCTTGCGACCTCCGACCCAGTTCTCAATCAGGCCCAGCCCTTGCCACCAATCGAGCCCAGACTTTACGACCACCGTACCCAGTTCCCAATCGTGCTCAATTCTCGCTACCAATCGTGCCCAAACCTTACGAACACCGTACCCAGTTCTCGCCGTCAACCGTGCAAAAACCTCGCGACCACCGTACCCAGTTCTCAATCCTGCCCAGCCTTCGCCACCAATTGTGCCCAGACCTCACGACCACCGTACCCAGTTCTCAATCGTGCCCAGTCCTCGCTGTCAATCATGCCCAGTCCTTGTCGCCACCCACGAATCTCCAACTTTGAAGATCATGAGCGGTATTATTCCTCTTCGACCAACGACGTTCAATGTGGTTTTCATCCCTTTTGA MVPRPCNHHTQFSIVASIRSQSCLELATSDPVLNQAQPLPPIEPRLYDHRTQFPIVLNSRYQSCPNLTNTVPSSRRQPCKNLATTVPSSQSCPAFATNCAQTSRPPYPVLNRAQSSLSIMPSPCRHPRISNFEDHERYYSSSTNDVQCGFHPF Homology
BLAST of IVF0005289 vs. ExPASy TrEMBL
Match: A0A5D3DM22 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001140 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of IVF0005289 vs. ExPASy TrEMBL
Match: A0A5A7TIN1 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001580 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24 Identity = 75/138 (54.35%), Postives = 81/138 (58.70%), Query Frame = 0
BLAST of IVF0005289 vs. ExPASy TrEMBL
Match: A0A5A7SMD2 (Protein transport protein SEC31-like protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00380 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.8e-09 Identity = 49/105 (46.67%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of IVF0005289 vs. ExPASy TrEMBL
Match: A0A5D3CEQ8 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00560 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06 Identity = 49/136 (36.03%), Postives = 56/136 (41.18%), Query Frame = 0
BLAST of IVF0005289 vs. NCBI nr
Match: KAA0041464.1 (hypothetical protein E6C27_scaffold6G00410 [Cucumis melo var. makuwa] >TYK24339.1 hypothetical protein E5676_scaffold205G001140 [Cucumis melo var. makuwa]) HSP 1 Score: 281 bits (720), Expect = 9.14e-95 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of IVF0005289 vs. NCBI nr
Match: KAA0041501.1 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa] >TYK24374.1 DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 122 bits (305), Expect = 9.84e-31 Identity = 76/138 (55.07%), Postives = 83/138 (60.14%), Query Frame = 0
BLAST of IVF0005289 vs. NCBI nr
Match: KAA0025401.1 (protein transport protein SEC31-like protein B [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 1.90e-11 Identity = 48/99 (48.48%), Postives = 54/99 (54.55%), Query Frame = 0
BLAST of IVF0005289 vs. NCBI nr
Match: TYK09772.1 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.02e-08 Identity = 49/136 (36.03%), Postives = 56/136 (41.18%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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