IVF0005127 (gene) Melon (IVF77) v1

Overview


Name	IVF0005127
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Histone-lysine N-methyltransferase ASHR1 isoform X3
Location	chr11: 4992375 .. 4992641 (-)
RNA-Seq Expression	IVF0005127
Synteny	IVF0005127

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACGAATATGAAGGAGAATGAACCATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACGAAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

mRNA sequence

ATGGAAACAACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACGAATATGAAGGAGAATGAACCATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACGAAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

Coding sequence (CDS)

ATGGAAACAACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACGAATATGAAGGAGAATGAACCATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACGAAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

Protein sequence

METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFNSEDPNSWLFRTQHKLCLLP

Homology

[Close]

BLAST of IVF0005127 vs. ExPASy TrEMBL
Match: A0A5A7SLZ3 (Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00100 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-33
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 10 MMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFN 69
          MMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFN
Sbjct: 1  MMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFN 60

Query: 70 SEDPNSWLFRTQHKLCLLP 89
          SEDPNSWLFRTQHKLCLLP
Sbjct: 61 SEDPNSWLFRTQHKLCLLP 79

[Close]

BLAST of IVF0005127 vs. ExPASy TrEMBL
Match: A0A5A7VII2 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00340 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           METT KERSMM  RLS+SMMRE STTNMKEN+PSSS EIG EK KKKA+ EDNNGD NKF
Sbjct: 59  METTAKERSMMCARLSESMMRELSTTNMKENKPSSSCEIGSEKVKKKADIEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 82
           KKV+M  FN EDPN WLFR +
Sbjct: 119 KKVEMPFFNGEDPNLWLFRAE 139

[Close]

BLAST of IVF0005127 vs. ExPASy TrEMBL
Match: A0A5D3DZI1 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00550 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           METT KERSMM  RLS+SMMRE STTNMKEN+PSSS EIG EK KKKA+ EDNNGD NKF
Sbjct: 59  METTAKERSMMCARLSESMMRELSTTNMKENKPSSSCEIGSEKVKKKADIEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 82
           KKV+M  FN EDPN WLFR +
Sbjct: 119 KKVEMPFFNGEDPNLWLFRVE 139

[Close]

BLAST of IVF0005127 vs. ExPASy TrEMBL
Match: A0A5D3CY52 (Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002220 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.3e-19
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           METT KERSMMSERLS+SM RES  T+ KEN+P  SR+I  EKA KK +TEDNNGD+NKF
Sbjct: 59  METTEKERSMMSERLSESMSRESLATSTKENKPFISRKIDSEKADKKFDTEDNNGDQNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 82
           KKV+M VFN EDP+SWLFR +
Sbjct: 119 KKVEMPVFNGEDPDSWLFRAE 139

[Close]

BLAST of IVF0005127 vs. ExPASy TrEMBL
Match: A0A5D3D7X3 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9G00080 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           MET   ERSMMSER S+SM RES  T+ KEN+PS++RE G EKA KK+NTEDNNGD NKF
Sbjct: 59  METVANERSMMSERSSESMARESQATSPKENKPSTNRETGSEKADKKSNTEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ-----HKL 85
           KKV+M VFN EDP+ WLF T+     HKL
Sbjct: 119 KKVEMLVFNDEDPDLWLFHTKRYFQIHKL 147

[Close]

BLAST of IVF0005127 vs. NCBI nr
Match: KAA0032052.1 (histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (375), Expect = 9.07e-45
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 10 MMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFN 69
          MMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFN
Sbjct: 1  MMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFN 60

Query: 70 SEDPNSWLFRTQHKLCLLP 88
          SEDPNSWLFRTQHKLCLLP
Sbjct: 61 SEDPNSWLFRTQHKLCLLP 79

[Close]

BLAST of IVF0005127 vs. NCBI nr
Match: KAA0065531.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (271), Expect = 8.60e-26
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           METT KERSMM  RLS+SMMRE STTNMKEN+PSSS EIG EK KKKA+ EDNNGD NKF
Sbjct: 59  METTAKERSMMCARLSESMMRELSTTNMKENKPSSSCEIGSEKVKKKADIEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M  FN EDPN WLFR +
Sbjct: 119 KKVEMPFFNGEDPNLWLFRAE 139

[Close]

BLAST of IVF0005127 vs. NCBI nr
Match: TYK29287.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 108 bits (271), Expect = 1.55e-25
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           METT KERSMM  RLS+SMMRE STTNMKEN+PSSS EIG EK KKKA+ EDNNGD NKF
Sbjct: 59  METTAKERSMMCARLSESMMRELSTTNMKENKPSSSCEIGSEKVKKKADIEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M  FN EDPN WLFR +
Sbjct: 119 KKVEMPFFNGEDPNLWLFRVE 139

[Close]

BLAST of IVF0005127 vs. NCBI nr
Match: TYK19603.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 8.87e-24
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           MET   ERSMMSER S+SM RES  T+ KEN+PS++RE G EKA KK+NTEDNNGD NKF
Sbjct: 59  METVANERSMMSERSSESMARESQATSPKENKPSTNRETGSEKADKKSNTEDNNGDRNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ-----HKL 84
           KKV+M VFN EDP+ WLF T+     HKL
Sbjct: 119 KKVEMLVFNDEDPDLWLFHTKRYFQIHKL 147

[Close]

BLAST of IVF0005127 vs. NCBI nr
Match: TYK16425.1 (histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (250), Expect = 1.56e-23
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           METT KERSMMSERLS+SM RES  T+ KEN+P  SR+I  EKA KK +TEDNNGD+NKF
Sbjct: 59  METTEKERSMMSERLSESMSRESLATSTKENKPFISRKIDSEKADKKFDTEDNNGDQNKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ 81
           KKV+M VFN EDP+SWLFR +
Sbjct: 119 KKVEMPVFNGEDPDSWLFRAE 139

The following BLAST results are available for this feature:

BLAST of IVF0005127 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0005127 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLZ3	2.3e-33	100.00	Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7VII2	2.7e-21	76.54	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]
A0A5D3DZI1	2.7e-21	76.54	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CY52	7.3e-19	71.60	Histone-lysine N-methyltransferase ASHR1 isoform X3 OS=Cucumis melo var. makuwa ...	[more]
A0A5D3D7X3	1.2e-18	66.29	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of IVF0005127 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032052.1	9.07e-45	100.00	histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0065531.1	8.60e-26	76.54	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]
TYK29287.1	1.55e-25	76.54	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
TYK19603.1	8.87e-24	66.29	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
TYK16425.1	1.56e-23	71.60	histone-lysine N-methyltransferase ASHR1 isoform X3 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0005127 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005127.2	IVF0005127.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003676	nucleic acid binding