IVF0005083 (gene) Melon (IVF77) v1

Overview


Name	IVF0005083
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Glucose-fructose oxidoreductase domain-containing protein 2, putative
Location	chr12: 21502382 .. 21503031 (-)
RNA-Seq Expression	IVF0005083
Synteny	IVF0005083

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACCCACCCTTTCAACTTAAATTCTCCATTCCTTTTTCCCCTCAATCTTGCGCCCTACTCTTCTCACATTCTTCAAAAACTCCAACCCCTTTTCACTTAACAGTCAACACACTCACACATATATATGCAGCATCTTCTCCTCCGATTCAAGCTGTATAAGGGAGTGTTTCTTCTCATGTATGACACCCATTTGTCTCCTGTGTTGGTCTAGCTAACTAGCAGTCGAGAAAATTTGGGAGCATTTGGTTGGGGAATTTTATCAAACAGGTTGTGGGCAGGTGCGATGAAAATGGAGGGCAGTAGAAGCTTGGAGCGGATGAATGCGTATGGTAAAAAGCAATGTAGGAGTTTGTTTTGGAAGATGAAGGCGGCTTTAAAGAAGGCGATTAAGAATGGAAATAAGCGGCAACTGAAGTTTCAGTATGATCCGAGTAGCTATGCTCTTAATTTTGATGACGGCCACAGCAAAATCAGGGAAGATAATGTTGAAGCATACAAGTTTGAAGTTCAATATTGTGGCAATGTTTACAATTCTGCTACGTGGGTTTATGTTCTTTGGGTGAAATCTGAGTAATGATTGTATATATTTTTTTTTATTTCCTCTCTGTTTTGTTTCTTTGTCTACTTGGTTTTTCATTTCACTGCCTAG

mRNA sequence

CCACCCACCCTTTCAACTTAAATTCTCCATTCCTTTTTCCCCTCAATCTTGCGCCCTACTCTTCTCACATTCTTCAAAAACTCCAACCCCTTTTCACTTAACAGTCAACACACTCACACATATATATGCAGCATCTTCTCCTCCGATTCAAGCTGTATAAGGGAGTGTTTCTTCTCATGTATGACACCCATTTGTCTCCTGTGTTGGTCTAGCTAACTAGCAGTCGAGAAAATTTGGGAGCATTTGGTTGGGGAATTTTATCAAACAGGTTGTGGGCAGGTGCGATGAAAATGGAGGGCAGTAGAAGCTTGGAGCGGATGAATGCGTATGGTAAAAAGCAATGTAGGAGTTTGTTTTGGAAGATGAAGGCGGCTTTAAAGAAGGCGATTAAGAATGGAAATAAGCGGCAACTGAAGTTTCAGTATGATCCGAGTAGCTATGCTCTTAATTTTGATGACGGCCACAGCAAAATCAGGGAAGATAATGTTGAAGCATACAAGTTTGAAGTTCAATATTGTGGCAATGTTTACAATTCTGCTACGTGGGTTTATGTTCTTTGGGTGAAATCTGAGTAATGATTGTATATATTTTTTTTTATTTCCTCTCTGTTTTGTTTCTTTGTCTACTTGGTTTTTCATTTCACTGCCTAG

Coding sequence (CDS)

ATGAAAATGGAGGGCAGTAGAAGCTTGGAGCGGATGAATGCGTATGGTAAAAAGCAATGTAGGAGTTTGTTTTGGAAGATGAAGGCGGCTTTAAAGAAGGCGATTAAGAATGGAAATAAGCGGCAACTGAAGTTTCAGTATGATCCGAGTAGCTATGCTCTTAATTTTGATGACGGCCACAGCAAAATCAGGGAAGATAATGTTGAAGCATACAAGTTTGAAGTTCAATATTGTGGCAATGTTTACAATTCTGCTACGTGGGTTTATGTTCTTTGGGTGAAATCTGAGTAA

Protein sequence

MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGHSKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE

Homology

[Close]

BLAST of IVF0005083 vs. ExPASy TrEMBL
Match: A0A5D3DSE1 (Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00440 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.7e-48
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1   MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60
           MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH
Sbjct: 24  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 83

Query: 61  SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 97
           SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE
Sbjct: 84  SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 119

[Close]

BLAST of IVF0005083 vs. ExPASy TrEMBL
Match: A0A0A0LXB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46
Identity = 92/96 (95.83%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60
          MKMEGSRSLERMNAYGKKQCRSLFWK+KAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH
Sbjct: 1  MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60

Query: 61 SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 97
          S+IREDNV+AYKFEVQYCGNVYNSA WVYVLWVKSE
Sbjct: 61 SEIREDNVDAYKFEVQYCGNVYNSAMWVYVLWVKSE 96

[Close]

BLAST of IVF0005083 vs. ExPASy TrEMBL
Match: A0A2K3LXS6 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g039381 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.2e-20
Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 8  SLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGHSKIREDN 67
          +LE +N YGKK+CRSLFW+M+AA+K+A+KNGN ++LKFQYDPSSYALNFDDG S     +
Sbjct: 6  NLEWVNVYGKKRCRSLFWRMRAAVKRALKNGNNQKLKFQYDPSSYALNFDDGCSYSHLRD 65

Query: 68 VEAYKF-----EVQYCGNVYNSATWVYVLWVKSE 97
              KF     +VQY   + N+ TWVYV+W+K++
Sbjct: 66 TLPKKFIAEDAQVQYFKGIDNT-TWVYVIWIKTK 98

[Close]

BLAST of IVF0005083 vs. ExPASy TrEMBL
Match: A0A7J8MLK3 (Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_010486 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 9  LERMNAYGKKQCRSLFWKMKAALKKAIK-NGNKRQLKFQYDPSSYALNFDDG--HSKIRE 68
          LE +N+YGKKQCRSLFW+ KAA+KKA+K  GNK+Q KFQYDPSSYALNFDDG  HS +  
Sbjct: 11 LEWVNSYGKKQCRSLFWRAKAAMKKALKGRGNKKQFKFQYDPSSYALNFDDGYCHSGVEA 70

Query: 69 DNVEAYKFEVQYCGNVYNSATWVYVLWVKS 96
          + +E  +  +Q C    N   WVYVL VKS
Sbjct: 71 NTIELAR--IQDCSECQNDIIWVYVLRVKS 98

[Close]

BLAST of IVF0005083 vs. ExPASy TrEMBL
Match: A0A7J9CAV6 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_008183 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 9  LERMNAYGKKQCRSLFWKMKAALKKAIK-NGNKRQLKFQYDPSSYALNFDDG--HSKIRE 68
          LE +N+YGKKQCRSLFW+ KAA+KKA+K  GNK+Q KFQYDPSSYALNFDDG  HS +  
Sbjct: 11 LEWVNSYGKKQCRSLFWRAKAAMKKALKGRGNKKQFKFQYDPSSYALNFDDGYCHSGVEV 70

Query: 69 DNVEAYKFEVQYCGNVYNSATWVYVLWVKS 96
          + +E  +  +Q C    N   WVYVL VKS
Sbjct: 71 NTIELAR--IQDCSECQNDIIWVYVLRVKS 98

[Close]

BLAST of IVF0005083 vs. NCBI nr
Match: KAA0056955.1 (putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa] >TYK26382.1 putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (503), Expect = 1.29e-63
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1   MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60
           MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH
Sbjct: 24  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 83

Query: 61  SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 96
           SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE
Sbjct: 84  SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 119

[Close]

BLAST of IVF0005083 vs. NCBI nr
Match: KGN64641.1 (hypothetical protein Csa_013386 [Cucumis sativus])

HSP 1 Score: 191 bits (486), Expect = 2.44e-61
Identity = 92/96 (95.83%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60
          MKMEGSRSLERMNAYGKKQCRSLFWK+KAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH
Sbjct: 1  MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60

Query: 61 SKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 96
          S+IREDNV+AYKFEVQYCGNVYNSA WVYVLWVKSE
Sbjct: 61 SEIREDNVDAYKFEVQYCGNVYNSAMWVYVLWVKSE 96

[Close]

BLAST of IVF0005083 vs. NCBI nr
Match: KAG6584014.1 (hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123 bits (309), Expect = 1.95e-34
Identity = 64/98 (65.31%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 1  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLK--FQYDPSSYALNFDD 60
          MK+EG R LER NAYGKKQC +LFW+++AALKKAIKNG+ RQLK  FQYDPSSYALNFDD
Sbjct: 1  MKLEGGRRLERTNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60

Query: 61 GHSKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 96
          G ++          +E+Q+C NVYNSA   YVLW KSE
Sbjct: 61 GRTR----------YELQHCANVYNSAMRAYVLWGKSE 88

[Close]

BLAST of IVF0005083 vs. NCBI nr
Match: KAG6573243.1 (hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109 bits (273), Expect = 5.96e-29
Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGH 60
          MK++GS  L RMNAYGK+QC SLFW+++AALKKAIKNG+KR L+FQYDPSSYALNFDDGH
Sbjct: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKRPLRFQYDPSSYALNFDDGH 60

Query: 61 SKIREDNVE-AYKFE 74
          +KI ED ++ A K+E
Sbjct: 61 TKISEDILDDASKYE 75

[Close]

BLAST of IVF0005083 vs. NCBI nr
Match: PNX83340.1 (hypothetical protein L195_g039381 [Trifolium pratense])

HSP 1 Score: 104 bits (260), Expect = 7.35e-27
Identity = 53/94 (56.38%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 8  SLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDG--HSKIRE 67
          +LE +N YGKK+CRSLFW+M+AA+K+A+KNGN ++LKFQYDPSSYALNFDDG  +S +R+
Sbjct: 6  NLEWVNVYGKKRCRSLFWRMRAAVKRALKNGNNQKLKFQYDPSSYALNFDDGCSYSHLRD 65

Query: 68 DNVEAYKFE---VQYCGNVYNSATWVYVLWVKSE 96
             + +  E   VQY   + N+ TWVYV+W+K++
Sbjct: 66 TLPKKFIAEDAQVQYFKGIDNT-TWVYVIWIKTK 98

[Close]

BLAST of IVF0005083 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 2.0e-06
Identity = 36/85 (42.35%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 10 ERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGHSKIREDNVE 69
          E +N Y KK    +F +MKAA+KK  K   K+Q  FQYDP SYALNFDDG      +N +
Sbjct: 8  EAVNQYRKK----MFRRMKAAVKKTKK---KKQTMFQYDPWSYALNFDDG-----VENPQ 67

Query: 70 AYKFEVQYCGNVYNSATWVYVLWVK 95
           +  +   C    +  T +YV+ VK
Sbjct: 68 RFSGD---CNCKLHRITLIYVVSVK 77

The following BLAST results are available for this feature:

BLAST of IVF0005083 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0005083 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSE1	3.7e-48	100.00	Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis ...	[more]
A0A0A0LXB8	3.4e-46	95.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1	[more]
A0A2K3LXS6	7.2e-20	56.38	Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g039381 PE=4 SV=1	[more]
A0A7J8MLK3	1.2e-19	61.11	Uncharacterized protein OS=Gossypium lobatum OX=34289 GN=Golob_010486 PE=4 SV=1	[more]
A0A7J9CAV6	1.6e-19	61.11	Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_008183 PE=4 ...	[more]

BLAST of IVF0005083 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056955.1	1.29e-63	100.00	putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis me...	[more]
KGN64641.1	2.44e-61	95.83	hypothetical protein Csa_013386 [Cucumis sativus]	[more]
KAG6584014.1	1.95e-34	65.31	hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6573243.1	5.96e-29	72.00	hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sorori...	[more]
PNX83340.1	7.35e-27	56.38	hypothetical protein L195_g039381 [Trifolium pratense]	[more]

BLAST of IVF0005083 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11112.1	2.0e-06	42.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34538:SF10	OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED	coord: 3..95
None	No IPR available	PANTHER	PTHR34538	EXPRESSED PROTEIN	coord: 3..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005083.1	IVF0005083.1	mRNA