IVF0005015 (gene) Melon (IVF77) v1

Overview
NameIVF0005015
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 10202753 .. 10203158 (+)
RNA-Seq ExpressionIVF0005015
SyntenyIVF0005015
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCGGAAAAAGGAAATGCTAGAGAAAGAACAAACTCTACCTCTTCAAAGGGCAATCGCCCATCTTTTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAAATCAATATGCAATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCGGCATACGGATTGGGTCTCCCACGAAGTCATTAACTCCACCTAGGCCTTCAGCCAATCTTATCCGTCCTTTTGGCTGAATCGTTCAAATGAGGCCTCCCGCCTCTCCTTCATCTAATAGGGAGTCTTCTACTCTTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGGTTTGTGTCAAGACCCGAAATCAAATCTTATTTTCAAAAGCCTATCATCGTTTATGATCCTATCATAG

mRNA sequence

ATGAGTTCGGAAAAAGGAAATGCTAGAGAAAGAACAAACTCTACCTCTTCAAAGGGCAATCGCCCATCTTTTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAAATCAATATGCAATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCGGCATACGGATTGGGTCTCCCACGAAGTCATTAACTCCACCTAGGCCTTCAGCCAATCTTATCCGGAGTCTTCTACTCTTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGGTTTGTGTCAAGACCCGAAATCAAATCTTATTTTCAAAAGCCTATCATCGTTTATGATCCTATCATAG

Coding sequence (CDS)

ATGAGTTCGGAAAAAGGAAATGCTAGAGAAAGAACAAACTCTACCTCTTCAAAGGGCAATCGCCCATCTTTTTCTTCTAATTCTGCACCCTCACCTATGAGTGCAAATCAATATGCAATGGATTTAGGGTTTACCACAGTAACCCGATCCAGATCAAGATCGTCCGGCATACGGATTGGGTCTCCCACGAAGTCATTAACTCCACCTAGGCCTTCAGCCAATCTTATCCGGAGTCTTCTACTCTTCCTACAACTTATTCTCAGGCTGTCACCCCCGATAAACGGTTTGTGTCAAGACCCGAAATCAAATCTTATTTTCAAAAGCCTATCATCGTTTATGATCCTATCATAG

Protein sequence

MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIGSPTKSLTPPRPSANLIRSLLLFLQLILRLSPPINGLCQDPKSNLIFKSLSSFMILS
Homology
BLAST of IVF0005015 vs. ExPASy TrEMBL
Match: A0A5D3D0R2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00980 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38
Identity = 100/134 (74.63%), Postives = 103/134 (76.87%), Query Frame = 0

Query: 1   MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
           MSSEKG+AR RTN TSSKGNR   SSNSAPSPMSANQY MDLGFTTVTRSRSRS GIRIG
Sbjct: 1   MSSEKGSARGRTNFTSSKGNRQYSSSNSAPSPMSANQYTMDLGFTTVTRSRSRSYGIRIG 60

Query: 61  SPTKSLTPPRPSANLIRS------------------LLLFLQLILRLSPPINGLCQDPKS 117
           SPT+S TPPRPS NLIR                   LL  LQLILRLSPPINGLCQDP+S
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVVQMRPSPLLHPIGILLFLLQLILRLSPPINGLCQDPRS 120

BLAST of IVF0005015 vs. ExPASy TrEMBL
Match: A0A5A7TP36 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00680 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.3e-25
Identity = 82/134 (61.19%), Postives = 91/134 (67.91%), Query Frame = 0

Query: 1   MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
           MSSEKG+AR RTNSTSSKGN PS SSN A SP++A+QYAMDLGFTTVTRSRSRSSGIRIG
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNYALSPLNADQYAMDLGFTTVTRSRSRSSGIRIG 60

Query: 61  SPTKSLTPPRPSANLIRSLLLFLQLILRLSP------------------PINGLCQDPKS 117
           S T+S TPPRPS NLI      +Q+    SP                  P       P+S
Sbjct: 61  SLTESSTPPRPSTNLICPSGGVVQMRPSASPSSNKEYSTPPTTYSQVVTPDKWFVPRPES 120

BLAST of IVF0005015 vs. ExPASy TrEMBL
Match: A0A5A7TB73 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1121G00570 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 9.0e-25
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0

Query: 1  MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
          MSSEKG+AR RTNSTSSKGNRPS SSN APSPMSA QYAMDLGFTTVTRSRSRSS IRIG
Sbjct: 1  MSSEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSAYQYAMDLGFTTVTRSRSRSSSIRIG 60

Query: 61 SPTKSLTPPRPSANLIR 78
          SPT+S TPPRPSANLIR
Sbjct: 61 SPTESSTPPRPSANLIR 77

BLAST of IVF0005015 vs. ExPASy TrEMBL
Match: A0A5A7URX0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00510 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24
Identity = 72/94 (76.60%), Postives = 78/94 (82.98%), Query Frame = 0

Query: 1  MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
          MSSEKG+AR RTNSTSSKGNRPS SSN APSPMSA+QYAMDL FTT+TRSRSRSSGIRIG
Sbjct: 1  MSSEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSADQYAMDLEFTTITRSRSRSSGIRIG 60

Query: 61 SPTKSLTPPRPSANLIRSLLLFLQLILRLSPPIN 95
          SPT+S TPPRPSANLIR     +Q+    SP  N
Sbjct: 61 SPTESSTPPRPSANLIRLSDGVVQMRPHASPSSN 94

BLAST of IVF0005015 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.6e-24
Identity = 71/100 (71.00%), Postives = 77/100 (77.00%), Query Frame = 0

Query: 1   MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
           MS EK NAR RTNSTSSKGNRPS SSNS PSPMSA+QYAMDLGFTTVTRSRSRSS IRIG
Sbjct: 1   MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60

Query: 61  SPTKSLTPPRPSANLIRSLLLFLQLILRLSPPINGLCQDP 101
           SPT+S TPP+PS NLIR     +Q+   +SP  N     P
Sbjct: 61  SPTESSTPPKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTP 100

BLAST of IVF0005015 vs. NCBI nr
Match: KAA0032003.1 (hypothetical protein E6C27_scaffold134G001000 [Cucumis melo var. makuwa] >TYK16824.1 hypothetical protein E5676_scaffold96G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (425), Expect = 3.68e-51
Identity = 100/134 (74.63%), Postives = 103/134 (76.87%), Query Frame = 0

Query: 1   MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
           MSSEKG+AR RTN TSSKGNR   SSNSAPSPMSANQY MDLGFTTVTRSRSRS GIRIG
Sbjct: 1   MSSEKGSARGRTNFTSSKGNRQYSSSNSAPSPMSANQYTMDLGFTTVTRSRSRSYGIRIG 60

Query: 61  SPTKSLTPPRPSANLIRS------------------LLLFLQLILRLSPPINGLCQDPKS 116
           SPT+S TPPRPS NLIR                   LL  LQLILRLSPPINGLCQDP+S
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVVQMRPSPLLHPIGILLFLLQLILRLSPPINGLCQDPRS 120

BLAST of IVF0005015 vs. NCBI nr
Match: KAA0038837.1 (hypothetical protein E6C27_scaffold2487G00030 [Cucumis melo var. makuwa] >TYK14263.1 hypothetical protein E5676_scaffold1121G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 6.31e-34
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 0

Query: 1  MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
          MSSEKG+AR RTNSTSSKGNRPS SSN APSPMSA QYAMDLGFTTVTRSRSRSS IRIG
Sbjct: 1  MSSEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSAYQYAMDLGFTTVTRSRSRSSSIRIG 60

Query: 61 SPTKSLTPPRPSANLIR 77
          SPT+S TPPRPSANLIR
Sbjct: 61 SPTESSTPPRPSANLIR 77

BLAST of IVF0005015 vs. NCBI nr
Match: KAA0056259.1 (hypothetical protein E6C27_scaffold226G00270 [Cucumis melo var. makuwa] >TYK05242.1 hypothetical protein E5676_scaffold108G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (310), Expect = 7.32e-34
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0

Query: 1  MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
          MSSEKG+AR RTNSTSSKGNRPS SSN APSPMSA+QYAMDL FTT+TRSRSRSSGIRIG
Sbjct: 1  MSSEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSADQYAMDLEFTTITRSRSRSSGIRIG 60

Query: 61 SPTKSLTPPRPSANLIR 77
          SPT+S TPPRPSANLIR
Sbjct: 61 SPTESSTPPRPSANLIR 77

BLAST of IVF0005015 vs. NCBI nr
Match: KAA0045303.1 (hypothetical protein E6C27_scaffold316G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 123 bits (308), Expect = 2.30e-33
Identity = 82/134 (61.19%), Postives = 91/134 (67.91%), Query Frame = 0

Query: 1   MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
           MSSEKG+AR RTNSTSSKGN PS SSN A SP++A+QYAMDLGFTTVTRSRSRSSGIRIG
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNYALSPLNADQYAMDLGFTTVTRSRSRSSGIRIG 60

Query: 61  SPTKSLTPPRPSANLIRSLLLFLQLILRLSP------------------PINGLCQDPKS 116
           S T+S TPPRPS NLI      +Q+    SP                  P       P+S
Sbjct: 61  SLTESSTPPRPSTNLICPSGGVVQMRPSASPSSNKEYSTPPTTYSQVVTPDKWFVPRPES 120

BLAST of IVF0005015 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (299), Expect = 1.50e-31
Identity = 66/77 (85.71%), Postives = 69/77 (89.61%), Query Frame = 0

Query: 1  MSSEKGNARERTNSTSSKGNRPSFSSNSAPSPMSANQYAMDLGFTTVTRSRSRSSGIRIG 60
          MS EK NAR RTNSTSSKGNRPS SSNS PSPMSA+QYAMDLGFTTVTRSRSRSS IRIG
Sbjct: 1  MSLEKENARGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIG 60

Query: 61 SPTKSLTPPRPSANLIR 77
          SPT+S TPP+PS NLIR
Sbjct: 61 SPTESSTPPKPSTNLIR 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D0R21.4e-3874.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TP365.3e-2561.19Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TB739.0e-2589.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7URX01.5e-2476.60Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U8A07.6e-2471.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0032003.13.68e-5174.63hypothetical protein E6C27_scaffold134G001000 [Cucumis melo var. makuwa] >TYK168... [more]
KAA0038837.16.31e-3489.61hypothetical protein E6C27_scaffold2487G00030 [Cucumis melo var. makuwa] >TYK142... [more]
KAA0056259.17.32e-3488.31hypothetical protein E6C27_scaffold226G00270 [Cucumis melo var. makuwa] >TYK0524... [more]
KAA0045303.12.30e-3361.19hypothetical protein E6C27_scaffold316G00680 [Cucumis melo var. makuwa][more]
KAA0049709.11.50e-3185.71hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0005015.2IVF0005015.2mRNA