IVF0004806 (gene) Melon (IVF77) v1

Overview


Name	IVF0004806
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein of unknown function (DUF3511)
Location	chr08: 2820911 .. 2821171 (+)
RNA-Seq Expression	IVF0004806
Synteny	IVF0004806

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCGATGGAACAGTCAAAAAGGAAGATGTGGTCAATCAAGAGCTCAAGAGAAGGCAAAGGGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATAATGTTTGA

mRNA sequence

ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCGATGGAACAGTCAAAAAGGAAGATGTGGTCAATCAAGAGCTCAAGAGAAGGCAAAGGGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATAATGTTTGA

Coding sequence (CDS)

ATGATGGAGAGAAGCAAATCATTAAGTGGGTCTTACTCAAAAGCCTATGGAGATGTGAGGTTTGGATTTGAGGACAATCCCAAATCATACAGCTTCGATGGAACAGTCAAAAAGGAAGATGTGGTCAATCAAGAGCTCAAGAGAAGGCAAAGGGTAGCTACTTACAATATGTATTCAATGGAAGGAAAGCTGAAGAAGTCCTTAAGAAACAGCTTCAAGTGGATCAAGAACAAGATTTCCCACAGCTTTTATAATGTTTGA

Protein sequence

MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYNV

Homology

[Close]

BLAST of IVF0004806 vs. ExPASy TrEMBL
Match: A0A5D3CM35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005800 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.4e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYNV 87
          EGKLKKSLRNSFKWIKNKISHSFYNV
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYNV 86

[Close]

BLAST of IVF0004806 vs. ExPASy TrEMBL
Match: A0A0A0KFC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486830 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-37
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSF+GT+KKEDV NQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYN 86
          EGKLKKSLRNSFKWIKNKISHSFY+
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYD 85

[Close]

BLAST of IVF0004806 vs. ExPASy TrEMBL
Match: W9RA26 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006721 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.8e-20
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDG-TVKKED-----VVNQELKRRQRVATY 61
          M+RSKSL G YS  YGD RFGFED  KSYSF+G +V+ ED       N E+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYN 86
          NMY+MEGKLK SLRNSFKWIK+K   ++Y+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYD 90

[Close]

BLAST of IVF0004806 vs. ExPASy TrEMBL
Match: A0A2P6RRL4 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0117891 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKED---------VVNQELKRRQRV 61
          ME+SKS SG YS AY + RFGFED PKSYSF+G V K +           N EL+RR+RV
Sbjct: 1  MEKSKSFSGYYSTAYTEARFGFEDRPKSYSFNGPVSKVEGPSSASGSGNSNPELERRKRV 60

Query: 62 ATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYN 86
          A YNMY+MEGK K SLRNSFKWIK K   +FY+
Sbjct: 61 ANYNMYTMEGKFKSSLRNSFKWIKGKFVDNFYD 93

[Close]

BLAST of IVF0004806 vs. ExPASy TrEMBL
Match: A0A2P5BU01 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_308860 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 4.2e-19
Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKK------EDVVNQELKRRQRVATY 61
          MERSKSL G YS  YGD RFGFED  KSYSF+G   +          N E+KRR+RVA Y
Sbjct: 1  MERSKSLPGHYSSLYGDGRFGFEDRSKSYSFNGPSSQAADDEFASSGNPEMKRRKRVAAY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYN 86
          NMY+MEGKLK SLRNSFKWIK+K   ++Y+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYD 90

[Close]

BLAST of IVF0004806 vs. NCBI nr
Match: TYK12983.1 (hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (438), Expect = 2.50e-54
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60
          MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM
Sbjct: 1  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60

Query: 61 EGKLKKSLRNSFKWIKNKISHSFYNV 86
          EGKLKKSLRNSFKWIKNKISHSFYNV
Sbjct: 61 EGKLKKSLRNSFKWIKNKISHSFYNV 86

[Close]

BLAST of IVF0004806 vs. NCBI nr
Match: KAE8647476.1 (hypothetical protein Csa_003778 [Cucumis sativus])

HSP 1 Score: 165 bits (418), Expect = 2.01e-50
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1   MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSM 60
           MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSF+GT+KKEDV NQELKRRQRVATYNMYSM
Sbjct: 64  MMERSKSLSGSYSKAYGDVRFGFEDNPKSYSFNGTIKKEDVANQELKRRQRVATYNMYSM 123

Query: 61  EGKLKKSLRNSFKWIKNKISHSFYN 85
           EGKLKKSLRNSFKWIKNKISHSFY+
Sbjct: 124 EGKLKKSLRNSFKWIKNKISHSFYD 148

[Close]

BLAST of IVF0004806 vs. NCBI nr
Match: EXB64484.1 (hypothetical protein L484_006721 [Morus notabilis])

HSP 1 Score: 107 bits (268), Expect = 2.45e-28
Identity = 57/90 (63.33%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDG-TVKKED-----VVNQELKRRQRVATY 61
          M+RSKSL G YS  YGD RFGFED  KSYSF+G +V+ ED       N E+KRR+RVA Y
Sbjct: 1  MDRSKSLPGHYSSLYGDARFGFEDRAKSYSFNGPSVRVEDHELGSSSNPEMKRRKRVANY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYN 85
          NMY+MEGKLK SLRNSFKWIK+K   ++Y+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYD 90

[Close]

BLAST of IVF0004806 vs. NCBI nr
Match: PRQ49076.1 (hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis])

HSP 1 Score: 105 bits (263), Expect = 1.54e-27
Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 0


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVV---------NQELKRRQRV 61
          ME+SKS SG YS AY + RFGFED PKSYSF+G V K +           N EL+RR+RV
Sbjct: 1  MEKSKSFSGYYSTAYTEARFGFEDRPKSYSFNGPVSKVEGPSSASGSGNSNPELERRKRV 60

Query: 62 ATYNMYSMEGKLKKSLRNSFKWIKNKISHSFYN 85
          A YNMY+MEGK K SLRNSFKWIK K   +FY+
Sbjct: 61 ANYNMYTMEGKFKSSLRNSFKWIKGKFVDNFYD 93

[Close]

BLAST of IVF0004806 vs. NCBI nr
Match: PON52269.1 (hypothetical protein TorRG33x02_308860 [Trema orientale])

HSP 1 Score: 104 bits (259), Expect = 5.76e-27
Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 2  MERSKSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKK--EDVV----NQELKRRQRVATY 61
          MERSKSL G YS  YGD RFGFED  KSYSF+G   +  +D      N E+KRR+RVA Y
Sbjct: 1  MERSKSLPGHYSSLYGDGRFGFEDRSKSYSFNGPSSQAADDEFASSGNPEMKRRKRVAAY 60

Query: 62 NMYSMEGKLKKSLRNSFKWIKNKISHSFYN 85
          NMY+MEGKLK SLRNSFKWIK+K   ++Y+
Sbjct: 61 NMYAMEGKLKSSLRNSFKWIKSKFVDTYYD 90

[Close]

BLAST of IVF0004806 vs. TAIR 10
Match: AT4G09890.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 67.4 bits (163), Expect = 6.4e-12
Identity = 38/81 (46.91%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 1  MMERSKSLSGSYSKAYGDVRFGFEDN-PKSYSFDGTVKKEDVVNQELKRRQRVATYNMYS 60
          MM+ SKS +  YS ++    FG++ N   SY+F+G     D    E+KR++RVA+YN+++
Sbjct: 1  MMKGSKSYT-EYSSSFSTDEFGYDQNRSNSYNFNGPCINTD---PEMKRKKRVASYNLFA 60

Query: 61 MEGKLKKSLRNSFKWIKNKIS 81
           E KLK +L+NSFKWIKNK S
Sbjct: 61 TEEKLKSTLKNSFKWIKNKFS 77

[Close]

BLAST of IVF0004806 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 54.7 bits (130), Expect = 4.3e-08
Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 11  SYSKAYGDVRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSMEGKLKKSLRN 70
           SYS +YG       D  K  S     K   + + EL+R++RVA+Y MY +EGK+K S RN
Sbjct: 30  SYSASYGTRENNIYDVKKEKSI-ARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRN 89

Query: 71  SFKWIKNKISHSFY 85
           SF+W+K + +   Y
Sbjct: 90  SFRWLKQRYTQVVY 102

[Close]

BLAST of IVF0004806 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 50.4 bits (119), Expect = 8.1e-07
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 11  SYSKAYGD--VRFGFEDNPKSYSFDGTVKKEDVVNQELKRRQRVATYNMYSMEGKLKKSL 70
           SYS +Y D   R   + NPK      +      V+ +L+R++RV +Y  Y++EGKLK S 
Sbjct: 42  SYSTSYTDYPTRIPEDQNPKK-GRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSF 101

Query: 71  RNSFKWIKNK 79
           R SFKWIK+K
Sbjct: 102 RKSFKWIKDK 110

[Close]

BLAST of IVF0004806 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 6   KSLSGSYSKAYGDVRFGFEDNPKSYSFDGTVKK---EDVVNQELKRRQRVATYNMYSMEG 65
           +S S S   AY +     +D+         VKK   + +   E++R++RVA+YN+Y +EG
Sbjct: 43  RSYSTSTYNAYQNPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEG 102

Query: 66  KLKKSLRNSFKWIKNKISHSFYNV 87
           ++K S++ SFKW K   S++ Y +
Sbjct: 103 RVKGSMKKSFKWFKETCSNAVYGL 126

[Close]

BLAST of IVF0004806 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 48.5 bits (114), Expect = 3.1e-06
Identity = 22/42 (52.38%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 45  ELKRRQRVATYNMYSMEGKLKKSLRNSFKWIKNK---ISHSF 84
           E+KR++R+A Y  Y++EGK+K +L+N F+WIKNK   I H F
Sbjct: 69  EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

The following BLAST results are available for this feature:

BLAST of IVF0004806 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0004806 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CM35	7.4e-40	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KFC2	1.5e-37	95.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486830 PE=4 SV=1	[more]
W9RA26	3.8e-20	63.33	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_006721 PE=4 SV=1	[more]
A0A2P6RRL4	1.4e-19	60.22	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0117891 PE=4...	[more]
A0A2P5BU01	4.2e-19	61.11	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_308860 PE=4 SV...	[more]

BLAST of IVF0004806 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12983.1	2.50e-54	100.00	hypothetical protein E5676_scaffold255G005800 [Cucumis melo var. makuwa]	[more]
KAE8647476.1	2.01e-50	95.29	hypothetical protein Csa_003778 [Cucumis sativus]	[more]
EXB64484.1	2.45e-28	63.33	hypothetical protein L484_006721 [Morus notabilis]	[more]
PRQ49076.1	1.54e-27	60.22	hypothetical protein RchiOBHm_Chr2g0117891 [Rosa chinensis]	[more]
PON52269.1	5.76e-27	62.22	hypothetical protein TorRG33x02_308860 [Trema orientale]	[more]

BLAST of IVF0004806 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09890.1	6.4e-12	46.91	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	4.3e-08	40.54	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	8.1e-07	42.86	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	1.8e-06	33.33	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	3.1e-06	52.38	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 43..84 e-value: 3.3E-21 score: 74.8
None	No IPR available	PANTHER	PTHR33193:SF41	SUBFAMILY NOT NAMED	coord: 2..81
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 2..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004806.2	IVF0004806.2	mRNA