IVF0004474 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTGGTCTTTCACATTACAACTTTTCCACTTCCCTCAACAAAACATCCTCCTCTTTCTCCTCCTCCTTCTTCTACCCTCTTCTCTCTAAAACCTCATTTTCGTTTCTCCATTTTCATTCCCCGATGATCGCACTACCATCAACTTAAGGTGAGATCAAACCCCAAAACCACTCCATCAATGGGTTCCTGTGCTTCAATCCACAGAAATCCTGATTCCGCCATGAAATTCAAACTCTCACTTGCTTCCAAAACCAACGATATGGCAATTCCTCCTTCACCCATCAAACAAAACAACACTCCCATCAACCCCACCGTCTTTCACAAATCTCAGACCTCCCCTTCTCACTTGGGTACTTCTCCTTTTCTTCTTTTTCAGTTTCTACTACTGTAATCGCCTGTGTTTTCTTCTTTTTGCTTCGTCTCTTTTAATGATTCCTTGTTGATTTGTATTTTTGTTGTGTGATGAACTTTGATGCTTGACAATCACTGCCTCTTTAGTCTTTTCCCCACTCATCTCAGAAACAAAATTATATGCGATCTAAAGTGTTTTTTGCTTCTTGCGTGTCCCTGATTTGACTTTGATTGCTTTGTCATGATCTAAACCTGTTTTATTTTTCTAATTGAATATCTTATTGAATTATTGCCTTTTGGACATATATTGTTTAATTTGTATGATAAAGTTAATCTAGGCCCCATTTGTTTATATTATTATTAAAAAAACTGAGGAACCGTTCTCTTTTTCAATCTAAATCTCCATAGATTGATGAAGAGAAGGGCTTTAAATTTCACCTCTTTCTTTTTCTTTTTAATATTATTCATTAAAATTAGAGAAACCCAGTTTTCTTTTCTTATAGTTTTGATGATAAAATTTTGAGATGGAATTTAACTCTTCTGTGTATGATGGAGAAATCCTTCCTTTCTCCACTAAAAGCTCTGTTTCCAATTAAGCTATGTATTGTTATTAGTGGATTTTGTGCTTAGTCATTAATTGACAAATAAAAAGATCTAAGAGAAAAATAAGTGTACTAAAGATTTGTTACTAAAGTTTACTGAGTTTCAATCATATTGTACTGATCACAACTAGTAATTTAGAAAACACCTTTTTGTTTATTAGTTGATTACCTTTTAACTTTAAAATAAAATAAGCGGTTTGTTTGTTTGTTTCTTTTGGTTTGTGTTTCTTGTAATTTGTTGCATAGCGATGTTAGATTTTATCTATCCCTCTTTTGATAAGGATGTTGTGATGAGTTTCCCTCCATCTCACATGAAGTAGAGTTCTTGGATAGTGAGGAATGCTTGATTTACAGGATTCAAGAATTCTCATTTATTAAGCTTAAACTCGGGAACTCAAAGAACGTCTGCCGCTCGTCTTAAGTCGTTACAACAGGACCGCCTTTTTGGGCAAATTTATTACTATTCCTAGTTTATTACGAGTTTAATTTGACCTTACCTATTTGGTCTTTGGGGCAATGGAATCAATTGCCTTGTTTAGTCATTATCAGAAAAAGGAGAAATGATGGATGAAAGTAAGACTTCTCTTCCTAGAATTGCGTAGCAGAAGCACTTTCTGGTGTAGGATTTCTTCACAAGGATGCTGTAACTCAGTTGCATTGAGAATTTCCAATGTTTATTGACTCATCCTTCCTATGTTTTGGGTTCCAAATTTTTATTGTTATGATGTGGTGGCCCAAACCATTATGATTGAAGGTTACTATTAGAAATCTTTCTACCTATTTGTCATTGTGAGTTTTTTTCTTTTATGTACTCTATTGATTGTGTTTTTCACACTAGTCTTGTGTTTTATATGCATTTGTTTTATTTTATTTTTTTGCTCTCTATTACACCTATTTTTGTATAACTCTGAAATGGTTGTTCTAGAAAAGAAGCATGTTGACGTTTGAGTTTTGGTGTTCTCTCATAGGTAGCAAGGATGAAGCGTTTTTTGATTCACGAGGCTGGTTGGATTCAGATTGTGAAGATGATTTCTACAGTGTTAATGGCGGTAAGTAGACATTGGAATTCTTTTTAATGCTGTTTGCCTCTTTCATCTCCTTTCTTAGAGTATTCAATTGTAATGGCTGCAGATTTCACTCCTTCACGAGGAAATACTCCGACACACTCCAGCTTCTCCTCCGGTACCCCTCGGATCAACCAAGTTCATGGCATTGACGATCAGACTCCAATCACCATTCCCGAACCATCGCCAACAGGAAAGAAGAAACTGGCTGATCTTTTCAGGGAGAGCTCTAGAAATGGCACTGACAGACAAGCCAAACCAACTCTAAATGAACTCGCCCTGCAGTCGAATCCTGAAACACCTTACGTGTCAGGAACAAACTCTGTATGTAGCAGTGAGAGGACCCAAATGGAGATGTCTGGGCTGAGAAGGAAAGGCCATTTGGATCAGTACAATGCTGCCTCCCAAGTTTGAGATCATGTCATAGCTTTGGTGACCGGAGGAAGAAGGCGAGTCCTGCCATAGCTGTGTAGTACAAGCTCTGATCCAACATGCCATAAGCTGTGAAATTCCCCTCTGGTTCTGCCATTGTGAGACCCTTGCTCATGGAGTTCACAATTGTTCAGAAATATGTAAAGTTCAGAAATATTCGATGCAGATGCAGCAGCAGTGTTCAAGAGGTATTGCTGTTGTTGAAGGCAATGCTTATATATATATAAATATATAGATACAGATATGTTAGATTCCTAGTACAGTGTTTCATATCATATGAGAATATGTGAGAAAACAAAGAGGAGAAAGGAAGAATAAAGGTAAAGAAAGTAAATAAGACTTTTTTTTGCACCTTAAGTTTGTTTTTCACTATGAGAATTATAATTAAAGCCTTTGTGTTGTTTAATAAAAGAAAAATAGCTTAACTATTTTATTTCTTTTTAATACCTTGTTTTTTTTTAAAAATTATATTATATTGCAAAATTTGGTACTTGTTTGGAGATAGAATTTAGTTTCTAAGTTAGAATTGGG CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTGGTCTTTCACATTACAACTTTTCCACTTCCCTCAACAAAACATCCTCCTCTTTCTCCTCCTCCTTCTTCTACCCTCTTCTCTCTAAAACCTCATTTTCGTTTCTCCATTTTCATTCCCCGATGATCGCACTACCATCAACTTAAGGTGAGATCAAACCCCAAAACCACTCCATCAATGGGTTCCTGTGCTTCAATCCACAGAAATCCTGATTCCGCCATGAAATTCAAACTCTCACTTGCTTCCAAAACCAACGATATGGCAATTCCTCCTTCACCCATCAAACAAAACAACACTCCCATCAACCCCACCGTCTTTCACAAATCTCAGACCTCCCCTTCTCACTTGGGTAGCAAGGATGAAGCGTTTTTTGATTCACGAGGCTGGTTGGATTCAGATTGTGAAGATGATTTCTACAGTGTTAATGGCGATTTCACTCCTTCACGAGGAAATACTCCGACACACTCCAGCTTCTCCTCCGGTACCCCTCGGATCAACCAAGTTCATGGCATTGACGATCAGACTCCAATCACCATTCCCGAACCATCGCCAACAGGAAAGAAGAAACTGGCTGATCTTTTCAGGGAGAGCTCTAGAAATGGCACTGACAGACAAGCCAAACCAACTCTAAATGAACTCGCCCTGCAGTCGAATCCTGAAACACCTTACGTGTCAGGAACAAACTCTGTATGTAGCAGTGAGAGGACCCAAATGGAGATGTCTGGGCTGAGAAGGAAAGGCCATTTGGATCAGTACAATGCTGCCTCCCAAGTTTGAGATCATGTCATAGCTTTGGTGACCGGAGGAAGAAGGCGAGTCCTGCCATAGCTGTGTAGTACAAGCTCTGATCCAACATGCCATAAGCTGTGAAATTCCCCTCTGGTTCTGCCATTGTGAGACCCTTGCTCATGGAGTTCACAATTGTTCAGAAATATGTAAAGTTCAGAAATATTCGATGCAGATGCAGCAGCAGTGTTCAAGAGGTATTGCTGTTGTTGAAGGCAATGCTTATATATATATAAATATATAGATACAGATATGTTAGATTCCTAGTACAGTGTTTCATATCATATGAGAATATGTGAGAAAACAAAGAGGAGAAAGGAAGAATAAAGGTAAAGAAAGTAAATAAGACTTTTTTTTGCACCTTAAGTTTGTTTTTCACTATGAGAATTATAATTAAAGCCTTTGTGTTGTTTAATAAAAGAAAAATAGCTTAACTATTTTATTTCTTTTTAATACCTTGTTTTTTTTTAAAAATTATATTATATTGCAAAATTTGGTACTTGTTTGGAGATAGAATTTAGTTTCTAAGTTAGAATTGGG ATGGGTTCCTGTGCTTCAATCCACAGAAATCCTGATTCCGCCATGAAATTCAAACTCTCACTTGCTTCCAAAACCAACGATATGGCAATTCCTCCTTCACCCATCAAACAAAACAACACTCCCATCAACCCCACCGTCTTTCACAAATCTCAGACCTCCCCTTCTCACTTGGGTAGCAAGGATGAAGCGTTTTTTGATTCACGAGGCTGGTTGGATTCAGATTGTGAAGATGATTTCTACAGTGTTAATGGCGATTTCACTCCTTCACGAGGAAATACTCCGACACACTCCAGCTTCTCCTCCGGTACCCCTCGGATCAACCAAGTTCATGGCATTGACGATCAGACTCCAATCACCATTCCCGAACCATCGCCAACAGGAAAGAAGAAACTGGCTGATCTTTTCAGGGAGAGCTCTAGAAATGGCACTGACAGACAAGCCAAACCAACTCTAAATGAACTCGCCCTGCAGTCGAATCCTGAAACACCTTACGTGTCAGGAACAAACTCTGTATGTAGCAGTGAGAGGACCCAAATGGAGATGTCTGGGCTGAGAAGGAAAGGCCATTTGGATCAGTACAATGCTGCCTCCCAAGTTTGA MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPINPTVFHKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDDQTPITIPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSSERTQMEMSGLRRKGHLDQYNAASQV Homology
BLAST of IVF0004474 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.1e-17 Identity = 62/139 (44.60%), Postives = 74/139 (53.24%), Query Frame = 0
BLAST of IVF0004474 vs. ExPASy TrEMBL
Match: A0A1S3BP47 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of IVF0004474 vs. ExPASy TrEMBL
Match: A0A0A0LB55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.5e-91 Identity = 170/177 (96.05%), Postives = 173/177 (97.74%), Query Frame = 0
BLAST of IVF0004474 vs. ExPASy TrEMBL
Match: A0A6J1F463 (uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73 Identity = 145/183 (79.23%), Postives = 159/183 (86.89%), Query Frame = 0
BLAST of IVF0004474 vs. ExPASy TrEMBL
Match: A0A6J1J5K2 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111481493 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 8.9e-73 Identity = 143/183 (78.14%), Postives = 159/183 (86.89%), Query Frame = 0
BLAST of IVF0004474 vs. ExPASy TrEMBL
Match: A0A6J1EK04 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111435186 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 8.4e-71 Identity = 145/192 (75.52%), Postives = 156/192 (81.25%), Query Frame = 0
BLAST of IVF0004474 vs. NCBI nr
Match: XP_008450086.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo]) HSP 1 Score: 363 bits (932), Expect = 1.05e-125 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of IVF0004474 vs. NCBI nr
Match: XP_011651566.1 (uncharacterized protein At3g27210 isoform X1 [Cucumis sativus]) HSP 1 Score: 350 bits (897), Expect = 2.27e-120 Identity = 170/177 (96.05%), Postives = 173/177 (97.74%), Query Frame = 0
BLAST of IVF0004474 vs. NCBI nr
Match: XP_038901054.1 (uncharacterized protein At3g27210-like [Benincasa hispida]) HSP 1 Score: 330 bits (845), Expect = 1.90e-112 Identity = 161/177 (90.96%), Postives = 167/177 (94.35%), Query Frame = 0
BLAST of IVF0004474 vs. NCBI nr
Match: XP_023529186.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 293 bits (751), Expect = 4.96e-98 Identity = 147/183 (80.33%), Postives = 159/183 (86.89%), Query Frame = 0
BLAST of IVF0004474 vs. NCBI nr
Match: KAG6581091.1 (hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 291 bits (744), Expect = 5.57e-97 Identity = 145/183 (79.23%), Postives = 159/183 (86.89%), Query Frame = 0
BLAST of IVF0004474 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 3.6e-18 Identity = 62/139 (44.60%), Postives = 74/139 (53.24%), Query Frame = 0
BLAST of IVF0004474 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.7 bits (195), Expect = 2.9e-15 Identity = 58/145 (40.00%), Postives = 77/145 (53.10%), Query Frame = 0
BLAST of IVF0004474 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.0 bits (193), Expect = 4.9e-15 Identity = 42/78 (53.85%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of IVF0004474 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 6.0e-13 Identity = 49/124 (39.52%), Postives = 62/124 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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