IVF0004372 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATGAAAATCCATCCCAATTGTCCAACTCCAATGCTCATTCTCTTTCTCTTTTTCCAGCTTCTTGCTATAACCATATCATGTCAAAACATTGCATCATATAACTCTTCTCAGGTAATTTAATCATAAAAGTTTATTCATTTCTATACAAAATTGACCAAATTGGCCCACCCCCCTTTTGTTTACAGCTGATATCAGAAGGCAATGGAGAATATGACTTCTTTTACCTTGTTCAACAGGTAATCAAATTTTTGTGTTGTTCCCATTTGGGTTTATCTTATGATCACTTTGCTTATTTGTGGCCGTTTTGTAAGCATTAGTGGCAGGTTTCTTTATGCAATTTGAGGCCTTGTCAAAAACCAGCAATACCCACTTTCAGTATTAATGGTTTCCGGCCTTCTTCTCATGGGATTTCCAGTTGCAAAATTGGAACAAGTTTTGATTCTTCAAAGGTATTTTTTGCTGGACAGAGATTTATAAAGAGTGTATGATTCTTCAAGTTTTGATCAATTAGGGTGTTTTTTTAATAGATGTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCACTTGAGGTGGAAGAGAATGAAGAAATGTGGAAGAAAGAGTGGGAAAGCCATGGAATTTGTTCACAGCCATTGCTAACTCAACATTCATTCTTTGAAACTGCACTCAAGCTTAAGCAAAATTTTGATCTCTTCACTATCTTAGCAAACAGAGGTTTGTACTGTTTCAAGATTTGAACAAAACTTTGATCTTCCATTGAAAATAGTCCACTTGTCCTTAGTAAGGGAAATGAGTTTGTGTTTACCCATAATACTAGTTAGTTCTTCAAGTTTTGAAAATTGTTGCAAGTTGTCCTTATACTAGTTTATTGTTAATATTTTGGAGAAAAATGTGGTGAGTTAAGCTACCAACTATTTTGAGATAATAGAAGATAGGAAGATCGAGAAAGAACATGAAGGATTCAATAACCTCTGGAAGAAATACAAGCATGTTCTTTTGATGTGATAACAGATAGTAGGGCTAACTTTTCAAACATGTGCTCAATTAGATGACAAAGACAAGTGCAAAAGAACTATAAAGAAAGTATATAATTTATTATTTCTCTAAAGTTGTGTTGATGTCAAAATTCGGATAGGGAAAAGAGTCTTGACCTTCATTTCATAACAATAATAAATTTGTTACGAGAGGAGAAGAATGTGATTAGCAAAACAAAAAAGAACTTGCACGCCATTGGGGTGCTACATATACATTTTAGTGCTTACGATCAAGAGTAGAGTAGTGTGAAAGCTTTAGAATTTGAGAATCAGAATGGGCTTACTCCTCCTTATAGTTACAAAGATGCGTTTATAGGAGTAATCGTTCTAGGTTATCCTTCATAGGATTTCAAGGTCATATTAGCATAAACACACCCGCATGAGGCTTTGCAAAGGGTCAAGGTCAAGGTCAAGGCTAAGCATCTCCTTTTGGTCCATTTTAGGTAAGAGTCATGCTTTGGGTTGGGGCATGAGTGTGGCATGCCTCACTAAGTACTTTGTTAGATTGAGACCGAGCATGTTGAGCTTTGGCCAAAGCTCTCTCCCCTAAGTCTATTTCAATTCTAAAGTGTTCTGTGTGGCCTAAATCTTGTTACTTTGTTAGCTCTTTTTCATTTAGGTTGTTGTTTATGTCGATTATGTCCTTGATTTAAAATAAAACACTCAGAACAAGTATATCATTCTTTAACTTATCATGTCATATCTTCATCCAGATCATTAATGATACATTTACACACCCAAAATCATTTTCAAAAGTTATCTCCACAGTTAACAAAGTGTATTTCAAAACATAACTAGAAGGAAAGTAACACACAATACATTAAATGCCAAGAATCTCACCTAACGTAAAAGCATCCTATGTTATTAATTAGGTCAATGAATAAGTTATCTTCAACTACTTAGACTTGACTTTATGAAATCGTTACAATACTTAGCTCTATTATATTATGAGTTTTTAATGTTAATGAAATGGTTTGGGATGCAGGAATCTTTCCATTTGGAGAGGTGTATGACTTAGAAATCATAAGTAATGCCATTAGAGATGCAACAGGACATACTCCACAAGTGGAATGCCAATCATACAAAAACATTCCTTTGCTCTCCAACATCTTCCTTTGCTTCCAATACAATCGTAATGCCATTCATATTGTGGACTGTCCCCTTATAAGAAGATGCAATTTCCAAGCTATCCTTTTCCCTTATTCTCAATTTGGTTCATCTTAGAAACTGAAAATTCACTTTGTAATGGCACTAGAAACAATCCCATCTATTTTTGCTTCTCCTGTCAACTCTTTTCTGGTGTTTTATTTAAGGCTGAATTTACACTGCTCCAC CCATGAAAATCCATCCCAATTGTCCAACTCCAATGCTCATTCTCTTTCTCTTTTTCCAGCTTCTTGCTATAACCATATCATGTCAAAACATTGCATCATATAACTCTTCTCAGCTGATATCAGAAGGCAATGGAGAATATGACTTCTTTTACCTTGTTCAACAGTGGCAGGTTTCTTTATGCAATTTGAGGCCTTGTCAAAAACCAGCAATACCCACTTTCAGTATTAATGGTTTCCGGCCTTCTTCTCATGGGATTTCCAGTTGCAAAATTGGAACAAGTTTTGATTCTTCAAAGATGTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCACTTGAGGTGGAAGAGAATGAAGAAATGTGGAAGAAAGAGTGGGAAAGCCATGGAATTTGTTCACAGCCATTGCTAACTCAACATTCATTCTTTGAAACTGCACTCAAGCTTAAGCAAAATTTTGATCTCTTCACTATCTTAGCAAACAGAGGAATCTTTCCATTTGGAGAGGTGTATGACTTAGAAATCATAAGTAATGCCATTAGAGATGCAACAGGACATACTCCACAAGTGGAATGCCAATCATACAAAAACATTCCTTTGCTCTCCAACATCTTCCTTTGCTTCCAATACAATCGTAATGCCATTCATATTGTGGACTGTCCCCTTATAAGAAGATGCAATTTCCAAGCTATCCTTTTCCCTTATTCTCAATTTGGTTCATCTTAGAAACTGAAAATTCACTTTGTAATGGCACTAGAAACAATCCCATCTATTTTTGCTTCTCCTGTCAACTCTTTTCTGGTGTTTTATTTAAGGCTGAATTTACACTGCTCCAC ATGAAAATCCATCCCAATTGTCCAACTCCAATGCTCATTCTCTTTCTCTTTTTCCAGCTTCTTGCTATAACCATATCATGTCAAAACATTGCATCATATAACTCTTCTCAGCTGATATCAGAAGGCAATGGAGAATATGACTTCTTTTACCTTGTTCAACAGTGGCAGGTTTCTTTATGCAATTTGAGGCCTTGTCAAAAACCAGCAATACCCACTTTCAGTATTAATGGTTTCCGGCCTTCTTCTCATGGGATTTCCAGTTGCAAAATTGGAACAAGTTTTGATTCTTCAAAGATGTTGGACCTGAAAAATGAGTTAGATAGAGAATGGCCATCACTTGAGGTGGAAGAGAATGAAGAAATGTGGAAGAAAGAGTGGGAAAGCCATGGAATTTGTTCACAGCCATTGCTAACTCAACATTCATTCTTTGAAACTGCACTCAAGCTTAAGCAAAATTTTGATCTCTTCACTATCTTAGCAAACAGAGGAATCTTTCCATTTGGAGAGGTGTATGACTTAGAAATCATAAGTAATGCCATTAGAGATGCAACAGGACATACTCCACAAGTGGAATGCCAATCATACAAAAACATTCCTTTGCTCTCCAACATCTTCCTTTGCTTCCAATACAATCGTAATGCCATTCATATTGTGGACTGTCCCCTTATAAGAAGATGCAATTTCCAAGCTATCCTTTTCCCTTATTCTCAATTTGGTTCATCTTAG MKIHPNCPTPMLILFLFFQLLAITISCQNIASYNSSQLISEGNGEYDFFYLVQQWQVSLCNLRPCQKPAIPTFSINGFRPSSHGISSCKIGTSFDSSKMLDLKNELDREWPSLEVEENEEMWKKEWESHGICSQPLLTQHSFFETALKLKQNFDLFTILANRGIFPFGEVYDLEIISNAIRDATGHTPQVECQSYKNIPLLSNIFLCFQYNRNAIHIVDCPLIRRCNFQAILFPYSQFGSS Homology
BLAST of IVF0004372 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 6.6e-27 Identity = 74/223 (33.18%), Postives = 115/223 (51.57%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 9.6e-26 Identity = 71/204 (34.80%), Postives = 106/204 (51.96%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25 Identity = 70/220 (31.82%), Postives = 114/220 (51.82%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy Swiss-Prot
Match: P80196 (Intracellular ribonuclease LX OS=Solanum lycopersicum OX=4081 GN=RNALX PE=1 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23 Identity = 67/190 (35.26%), Postives = 96/190 (50.53%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy Swiss-Prot
Match: Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3) HSP 1 Score: 100.5 bits (249), Expect = 2.7e-20 Identity = 69/216 (31.94%), Postives = 108/216 (50.00%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy TrEMBL
Match: A0A1S3C9D7 (ribonuclease 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 7.4e-138 Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy TrEMBL
Match: A0A1S3C9W2 (ribonuclease 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 1.3e-134 Identity = 237/241 (98.34%), Postives = 237/241 (98.34%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy TrEMBL
Match: A0A5A7TBT9 (Ribonuclease 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00240 PE=3 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 7.9e-132 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy TrEMBL
Match: A0A0A0KSB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636550 PE=3 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126 Identity = 218/241 (90.46%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of IVF0004372 vs. ExPASy TrEMBL
Match: A0A1S3CAE8 (extracellular ribonuclease LE-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498487 PE=3 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 4.6e-124 Identity = 222/241 (92.12%), Postives = 222/241 (92.12%), Query Frame = 0
BLAST of IVF0004372 vs. NCBI nr
Match: XP_008459317.1 (PREDICTED: ribonuclease 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 494 bits (1271), Expect = 2.68e-176 Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0
BLAST of IVF0004372 vs. NCBI nr
Match: XP_008459319.1 (PREDICTED: ribonuclease 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 483 bits (1242), Expect = 6.59e-172 Identity = 237/241 (98.34%), Postives = 237/241 (98.34%), Query Frame = 0
BLAST of IVF0004372 vs. NCBI nr
Match: KAA0039496.1 (ribonuclease 1-like isoform X1 [Cucumis melo var. makuwa] >TYK15250.1 ribonuclease 1-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 474 bits (1220), Expect = 1.11e-168 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
BLAST of IVF0004372 vs. NCBI nr
Match: XP_004148699.1 (ribonuclease 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 457 bits (1175), Expect = 1.55e-161 Identity = 218/241 (90.46%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of IVF0004372 vs. NCBI nr
Match: XP_008459320.1 (PREDICTED: extracellular ribonuclease LE-like isoform X3 [Cucumis melo]) HSP 1 Score: 448 bits (1153), Expect = 1.42e-158 Identity = 222/241 (92.12%), Postives = 222/241 (92.12%), Query Frame = 0
BLAST of IVF0004372 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein ) HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31 Identity = 73/198 (36.87%), Postives = 109/198 (55.05%), Query Frame = 0
BLAST of IVF0004372 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 ) HSP 1 Score: 122.5 bits (306), Expect = 4.7e-28 Identity = 74/223 (33.18%), Postives = 115/223 (51.57%), Query Frame = 0
BLAST of IVF0004372 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 ) HSP 1 Score: 118.6 bits (296), Expect = 6.8e-27 Identity = 71/204 (34.80%), Postives = 106/204 (51.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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