
IVF0004364 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGCTTTTCTTACGTCAATGGATAGCAGATGTTGGAAATCAGCACTGACTAGATGGGAACCATCGTTCGTTAAAGATGTTGCTGGAAACACTACTCTATAGCCTGAGATCACCTAGACAAAGGAAGAAGATGAAGAATCACTTGGAAACTCGATGGCTCTAAATGCATTATTCAATAGTGTGGACCAGAATGTTTTCAAACTTATTAACACATGTACCTCGGCAAAAGAAGCCTAA ATGATTGCTTTTCTTACGTCAATGGATAGCAGATGTTGGAAATCAGCACTGACTAGATGGGAACCATCGTTCGTTAAAGATACAAAGGAAGAAGATGAAGAATCACTTGGAAACTCGATGGCTCTAAATGCATTATTCAATAGTGTGGACCAGAATGTTTTCAAACTTATTAACACATGTACCTCGGCAAAAGAAGCCTAA ATGATTGCTTTTCTTACGTCAATGGATAGCAGATGTTGGAAATCAGCACTGACTAGATGGGAACCATCGTTCGTTAAAGATACAAAGGAAGAAGATGAAGAATCACTTGGAAACTCGATGGCTCTAAATGCATTATTCAATAGTGTGGACCAGAATGTTTTCAAACTTATTAACACATGTACCTCGGCAAAAGAAGCCTAA MIAFLTSMDSRCWKSALTRWEPSFVKDTKEEDEESLGNSMALNALFNSVDQNVFKLINTCTSAKEA Homology
BLAST of IVF0004364 vs. ExPASy TrEMBL
Match: A0A5A7VAY3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001490 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 7.4e-16 Identity = 50/78 (64.10%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of IVF0004364 vs. ExPASy TrEMBL
Match: A0A5D3BG63 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00170 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14 Identity = 48/78 (61.54%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of IVF0004364 vs. ExPASy TrEMBL
Match: A0A5D3CDY8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold404G00030 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14 Identity = 49/79 (62.03%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of IVF0004364 vs. ExPASy TrEMBL
Match: A0A5A7U4G8 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001030 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.1e-14 Identity = 47/66 (71.21%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of IVF0004364 vs. ExPASy TrEMBL
Match: A0A5A7TXB8 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001800 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.0e-14 Identity = 46/79 (58.23%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of IVF0004364 vs. NCBI nr
Match: KAA0065462.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 1.37e-22 Identity = 50/78 (64.10%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of IVF0004364 vs. NCBI nr
Match: KAA0038855.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK09428.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 87.4 bits (215), Expect = 2.82e-19 Identity = 49/79 (62.03%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of IVF0004364 vs. NCBI nr
Match: TYJ98064.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 88.2 bits (217), Expect = 8.30e-19 Identity = 48/78 (61.54%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of IVF0004364 vs. NCBI nr
Match: KAA0050148.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK06404.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 9.05e-19 Identity = 47/66 (71.21%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of IVF0004364 vs. NCBI nr
Match: KAA0046626.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 85.5 bits (210), Expect = 5.42e-18 Identity = 46/79 (58.23%), Postives = 53/79 (67.09%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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